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Volumn 6, Issue 9, 1999, Pages

Ligand recognition by SH3 and WW domains: The role of N-alkylation in PPII helices

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EID: 0033200367     PISSN: 10745521     EISSN: None     Source Type: Journal    
DOI: 10.1016/S1074-5521(99)80108-2     Document Type: Review
Times cited : (16)

References (34)
  • 1
    • 0028895654 scopus 로고
    • Modular binding domains in signal transduction proteins
    • Cohen, G.B., Ren, R. & Baltimore, D. (1995). Modular binding domains in signal transduction proteins. Cell 80, 237-248.
    • (1995) Cell , vol.80 , pp. 237-248
    • Cohen, G.B.1    Ren, R.2    Baltimore, D.3
  • 2
    • 0032541641 scopus 로고    scopus 로고
    • From Src homology domains to other signaling modules: Proposal of the 'protein recognition code'
    • Sudol, M. (1998). From Src homology domains to other signaling modules: Proposal of the 'protein recognition code'. Oncogene 17, 1469-1474.
    • (1998) Oncogene , vol.17 , pp. 1469-1474
    • Sudol, M.1
  • 3
    • 0031457622 scopus 로고    scopus 로고
    • Signaling through scaffold anchoring, and adapter proteins
    • Pawson, T. & Scott, J.D. (1997). Signaling through scaffold anchoring, and adapter proteins. Science 278, 2075-2080.
    • (1997) Science , vol.278 , pp. 2075-2080
    • Pawson, T.1    Scott, J.D.2
  • 4
    • 0032509175 scopus 로고    scopus 로고
    • Exploiting the basis of proline recognition by SH3 and WW domains: Design of N-substituted inhibitors
    • Nguyen, J.T., Turck, C.W., Cohen, F.E., Zuckermann, R.N. & Lim, W.A. (1998). Exploiting the basis of proline recognition by SH3 and WW domains: Design of N-substituted inhibitors. Science 282, 2088-2092.
    • (1998) Science , vol.282 , pp. 2088-2092
    • Nguyen, J.T.1    Turck, C.W.2    Cohen, F.E.3    Zuckermann, R.N.4    Lim, W.A.5
  • 5
    • 0028303266 scopus 로고
    • Thermodynamic studies of tyrosyl-phospho-peptide binding to the SH2 domain of p56lck
    • Lemmon, LA. & Ladbury, J.E. (1994). Thermodynamic studies of tyrosyl-phospho-peptide binding to the SH2 domain of p56lck. Biochemistry 33, 5070-5076.
    • (1994) Biochemistry , vol.33 , pp. 5070-5076
    • Lemmon, L.A.1    Ladbury, J.E.2
  • 6
    • 0027409064 scopus 로고
    • Binding of a high affinity phosphotyrosyl peptide to the Src SH2 domain: Crystal structure of the bound and peptide-free forms
    • Waksman, G., Shoelson, S.E., Pant, N., Cowburn, D. & Kuriyan, J. (1993). Binding of a high affinity phosphotyrosyl peptide to the Src SH2 domain: Crystal structure of the bound and peptide-free forms. Cell 72, 779-790.
    • (1993) Cell , vol.72 , pp. 779-790
    • Waksman, G.1    Shoelson, S.E.2    Pant, N.3    Cowburn, D.4    Kuriyan, J.5
  • 7
    • 0028130221 scopus 로고
    • Peptide inhibitors of Src SH3-SH2-phosphoprotein interactions
    • Gilmer T., et al., & Charifson, P. (1994). Peptide inhibitors of Src SH3-SH2-phosphoprotein interactions. J. Biol. Chem. 269, 31711-31719.
    • (1994) J. Biol. Chem. , vol.269 , pp. 31711-31719
    • Gilmer, T.1    Charifson, P.2
  • 8
    • 0027502504 scopus 로고
    • Recognition of a high-affinity phosphotyrosyl peptide by the Src homology 2 domain of p56lck
    • Eck, M.J., Shoelson, S.E. & Harrison, S.C. (1993). Recognition of a high-affinity phosphotyrosyl peptide by the Src homology 2 domain of p56lck. Nature 362, 87-91.
    • (1993) Nature , vol.362 , pp. 87-91
    • Eck, M.J.1    Shoelson, S.E.2    Harrison, S.C.3
  • 9
    • 0028346469 scopus 로고
    • SH2 domain specificity and activity modified by a single residue
    • Marengere, L.E., et al., & Pawson, T. (1994).SH2 domain specificity and activity modified by a single residue. Nature 369, 502-505.
    • (1994) Nature , vol.369 , pp. 502-505
    • Marengere, L.E.1    Pawson, T.2
  • 10
    • 0030950608 scopus 로고    scopus 로고
    • Modular peptide recognition domains in eukaryotic signaling
    • Kuriyan, J. & Cowburn, D. (1997). Modular peptide recognition domains in eukaryotic signaling. Annu. Rev. Biomol. Struct. 26, 259-288.
    • (1997) Annu. Rev. Biomol. Struct. , vol.26 , pp. 259-288
    • Kuriyan, J.1    Cowburn, D.2
  • 11
    • 0029775570 scopus 로고    scopus 로고
    • Structure of the WW domain of a kinase-associated protein complexed with a proline-rich peptide
    • Macias, M.J., et al., & Oschkinat, H. (1996). Structure of the WW domain of a kinase-associated protein complexed with a proline-rich peptide. Nature 382, 646-649.
    • (1996) Nature , vol.382 , pp. 646-649
    • Macias, M.J.1    Oschkinat, H.2
  • 13
    • 0027102571 scopus 로고
    • Solution structure of the SH3 domain of Src and identification of its ligand-binding site
    • Yu, H., Rosen, M.K., Bum Shin, T., Seidel-Dugan, C., Brugge, J.S. & Schreiber, S.L. (1992). Solution structure of the SH3 domain of Src and identification of its ligand-binding site. Science 258, 1665-1668.
    • (1992) Science , vol.258 , pp. 1665-1668
    • Yu, H.1    Rosen, M.K.2    Bum Shin, T.3    Seidel-Dugan, C.4    Brugge, J.S.5    Schreiber, S.L.6
  • 14
    • 0013484134 scopus 로고
    • Structural basis for the binding of proline-rich peptides to SH3 domains
    • Yu, H., Chen, J.K., Feng, S., Dalgarno, D.C., Brauer, A.W. & Schreiber, S.L. (1994). Structural basis for the binding of proline-rich peptides to SH3 domains. Cell 76, 933-945.
    • (1994) Cell , vol.76 , pp. 933-945
    • Yu, H.1    Chen, J.K.2    Feng, S.3    Dalgarno, D.C.4    Brauer, A.W.5    Schreiber, S.L.6
  • 15
    • 0028148629 scopus 로고
    • Structural determinants of peptide-binding orientation and of sequence specificity in SH3 domains
    • Lim, W.A., Richards, F.M. & Fox, R.O. (1994). Structural determinants of peptide-binding orientation and of sequence specificity in SH3 domains. Nature 372, 375-379.
    • (1994) Nature , vol.372 , pp. 375-379
    • Lim, W.A.1    Richards, F.M.2    Fox, R.O.3
  • 16
    • 0027408247 scopus 로고
    • Identification of a 10-amino acid proline-rich SH3 binding site
    • Ren, R., Mayer, B.J., Cicchetti, P. & Baltimore, D. (1993). Identification of a 10-amino acid proline-rich SH3 binding site. Science 259, 1157-1161.
    • (1993) Science , vol.259 , pp. 1157-1161
    • Ren, R.1    Mayer, B.J.2    Cicchetti, P.3    Baltimore, D.4
  • 17
    • 0030910308 scopus 로고    scopus 로고
    • FBP WW domains and the Abl SH3 domain bind to a specific class of proline-rich ligands
    • Bedford, M.T., Chan, D.C. & Leder P. (1997). FBP WW domains and the Abl SH3 domain bind to a specific class of proline-rich ligands. EMBO J. 16, 2376-83.
    • (1997) EMBO J. , vol.16 , pp. 2376-2383
    • Bedford, M.T.1    Chan, D.C.2    Leder, P.3
  • 18
    • 0027962645 scopus 로고
    • Two binding orientations for peptides to the src SH3 domain: Development of a general model for SH3-ligand interaction
    • Feng, S., Chen, J.K., Yu, H., Simon, J.A. & Schreiber, S.L. (1994). Two binding orientations for peptides to the src SH3 domain: Development of a general model for SH3-ligand interaction. Science 266, 1241-1247.
    • (1994) Science , vol.266 , pp. 1241-1247
    • Feng, S.1    Chen, J.K.2    Yu, H.3    Simon, J.A.4    Schreiber, S.L.5
  • 19
    • 0029589911 scopus 로고
    • Specific interactions outside the proline-rich core of two classes of Src homology 3 ligands
    • Feng, S., Kasahara, C., Rickles, R.J. & Schreiber, S.L. (1995). Specific interactions outside the proline-rich core of two classes of Src homology 3 ligands. Proc. Natl Acad. Sci. USA 92, 12408-12415.
    • (1995) Proc. Natl Acad. Sci. USA , vol.92 , pp. 12408-12415
    • Feng, S.1    Kasahara, C.2    Rickles, R.J.3    Schreiber, S.L.4
  • 21
    • 0027936659 scopus 로고
    • Characterization of the interaction of natural proline-rich peptides with five different SH3 domains
    • Viguera, A.R., Arrondo, J.L.R., Musacchio, A., Saraste, M. & Serrano, L. (1994). Characterization of the interaction of natural proline-rich peptides with five different SH3 domains. Biochemistry 33, 10925-10933.
    • (1994) Biochemistry , vol.33 , pp. 10925-10933
    • Viguera, A.R.1    Arrondo, J.L.R.2    Musacchio, A.3    Saraste, M.4    Serrano, L.5
  • 22
    • 0027892193 scopus 로고
    • Biased combinatorial libraries: Novel ligands for the SH3 domain of phosphotidylinositol 3 kinase
    • Chen, J.K., Lane, W.S., Brauer, A.W., Tanaka, A. & Schreiber, S.L. (1993). Biased combinatorial libraries: Novel ligands for the SH3 domain of phosphotidylinositol 3 kinase. J. Am. Chem. Soc. 115, 12591-12592.
    • (1993) J. Am. Chem. Soc. , vol.115 , pp. 12591-12592
    • Chen, J.K.1    Lane, W.S.2    Brauer, A.W.3    Tanaka, A.4    Schreiber, S.L.5
  • 23
    • 0027971687 scopus 로고
    • Identification of Src, Fyn, Lyn, Pl3K and Abl SH3 domain ligands using phage display libraries
    • Rickles, R.J., et al., & Zoller, M.J. (1994). Identification of Src, Fyn, Lyn, Pl3K and Abl SH3 domain ligands using phage display libraries. EMBO J. 13, 5598-5604.
    • (1994) EMBO J. , vol.13 , pp. 5598-5604
    • Rickles, R.J.1    Zoller, M.J.2
  • 24
    • 0030062879 scopus 로고    scopus 로고
    • Protein structure-based combinatorial chemistry: Discovery of nonpeptide binding elements to Src SH3 domain
    • Combs, A.P., Kapoor, T.M., Feng, S., Chen, J.K., Daude-Snow, F. & Schreiber, S.L. (1996). Protein structure-based combinatorial chemistry: Discovery of nonpeptide binding elements to Src SH3 domain. J. Am. Chem. Soc. 118, 287-288.
    • (1996) J. Am. Chem. Soc. , vol.118 , pp. 287-288
    • Combs, A.P.1    Kapoor, T.M.2    Feng, S.3    Chen, J.K.4    Daude-Snow, F.5    Schreiber, S.L.6
  • 25
    • 0030220960 scopus 로고    scopus 로고
    • Molecular basis for the binding of SH3 ligands with nonpeptide elements identified by combinatorial synthesis
    • Feng, S., Kapoor, T.M., Shirai, F., Combs, A.P. & Schreiber, S.L. (1996). Molecular basis for the binding of SH3 ligands with nonpeptide elements identified by combinatorial synthesis. Chem. Biol. 3, 661-670.
    • (1996) Chem. Biol. , vol.3 , pp. 661-670
    • Feng, S.1    Kapoor, T.M.2    Shirai, F.3    Combs, A.P.4    Schreiber, S.L.5
  • 26
    • 0032555743 scopus 로고    scopus 로고
    • Crystal structure of the Abl-SH3 domain complexed with a designed high-affinity peptide ligand: Implications for SH3-ligand interactions
    • Pisabarro, M.T., Serrano, L. & Wilmanns, M. (1998). Crystal structure of the Abl-SH3 domain complexed with a designed high-affinity peptide ligand: Implications for SH3-ligand interactions. J. Mol. Biol. 281, 513-521.
    • (1998) J. Mol. Biol. , vol.281 , pp. 513-521
    • Pisabarro, M.T.1    Serrano, L.2    Wilmanns, M.3
  • 27
    • 0029643950 scopus 로고
    • Structural basis for the specific interaction of lysine-containing proline-rich peptides with the amino-terminal SH3 domain of c-Crk
    • Wu, X., et al., & Kuriyan, J. (1995). Structural basis for the specific interaction of lysine-containing proline-rich peptides with the amino-terminal SH3 domain of c-Crk. Structure 1, 215-226.
    • (1995) Structure , vol.1 , pp. 215-226
    • Wu, X.1    Kuriyan, J.2
  • 28
    • 0032491205 scopus 로고    scopus 로고
    • Transient kinetic studies on the interaction of Ras and the Ras-binding domain of c-Raf-1 reveal rapid equilibration of the complex
    • Sydor, J.R., Engelhard, M., Wittinghofer, A., Goody, R.S. & Herrmann, C. (1998). Transient kinetic studies on the interaction of Ras and the Ras-binding domain of c-Raf-1 reveal rapid equilibration of the complex. Biochemistry 37, 14292-14299.
    • (1998) Biochemistry , vol.37 , pp. 14292-14299
    • Sydor, J.R.1    Engelhard, M.2    Wittinghofer, A.3    Goody, R.S.4    Herrmann, C.5
  • 29
    • 0027411585 scopus 로고
    • SH2 domains exhibit high-affinity binding to tyrosine-phosphorylated peptides yet also exhibit rapid dissociation and exchange
    • Felder, S., et al., & Schlessinger, J. (1993). SH2 domains exhibit high-affinity binding to tyrosine-phosphorylated peptides yet also exhibit rapid dissociation and exchange. Mol. Cell. Biol. 13, 1449-1455.
    • (1993) Mol. Cell. Biol. , vol.13 , pp. 1449-1455
    • Felder, S.1    Schlessinger, J.2
  • 30
    • 0032076568 scopus 로고    scopus 로고
    • A trivalent system from vancomycin-D-Ala-D-Ala with higher affinity than avidin-biotin
    • Rao, J., Lahiri, J., Isaacs, L., Weis, R.M. & Whitesides, G.M. (1998). A trivalent system from vancomycin-D-Ala-D-Ala with higher affinity than avidin-biotin. Science 280, 708-711.
    • (1998) Science , vol.280 , pp. 708-711
    • Rao, J.1    Lahiri, J.2    Isaacs, L.3    Weis, R.M.4    Whitesides, G.M.5
  • 31
    • 0028807441 scopus 로고
    • Enhanced affinities and specificities of consolidated ligands for the Src homology (SH) 3 and SH2 domains of abelson protein tyrosine kinase
    • Cowburn, D., Zheng, J., Xu, Q. & Barany, G. (1995). Enhanced affinities and specificities of consolidated ligands for the Src homology (SH) 3 and SH2 domains of abelson protein tyrosine kinase. J. Biol. Chem. 270, 26738-26741
    • (1995) J. Biol. Chem. , vol.270 , pp. 26738-26741
    • Cowburn, D.1    Zheng, J.2    Xu, Q.3    Barany, G.4
  • 32
    • 0029925701 scopus 로고    scopus 로고
    • Targeting signal transduction for disease therapy
    • Levitzki, A. (1996). Targeting signal transduction for disease therapy. Curr. Opin. Cell Biol. 8, 239-244.
    • (1996) Curr. Opin. Cell Biol. , vol.8 , pp. 239-244
    • Levitzki, A.1
  • 34
    • 0026319199 scopus 로고
    • Protein folding and association: Insights from the interfacial and thermodynamic properties of hydrocarbons
    • Nicholls, A., Sharp, K.A. & Honig, B. (1991). Protein folding and association: Insights from the interfacial and thermodynamic properties of hydrocarbons. Proteins 11, 281-296.
    • (1991) Proteins , vol.11 , pp. 281-296
    • Nicholls, A.1    Sharp, K.A.2    Honig, B.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.