Conservation of structure and cold-regulation of RNA-binding proteins in cyanobacteria: Probable convergent evolution with eukaryotic glycine-rich RNA-binding proteins

Nucleic Acids Research

Volumn 27, Issue 9, 1999, Pages 2029-2036

  Maruyama, Kyonoshin ^a,b   Sato, Naoki ^a   Ohta, Niji ^b  

^a SAITAMA UNIVERSITY   (Japan)

^b WASEDA UNIVERSITY   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

GLYCINE; RNA BINDING PROTEIN;

ANABAENA; ARTICLE; CARBOXY TERMINAL SEQUENCE; CHLOROPLAST; CYANOBACTERIUM; EVOLUTION; GENE INDUCTION; NONHUMAN; NUCLEOTIDE SEQUENCE; PHYLOGENY; PRIORITY JOURNAL; PROTEIN DOMAIN; PROTEIN STRUCTURE; TEMPERATURE;

AMINO ACID SEQUENCE; COLD; CYANOBACTERIA; EUKARYOTIC CELLS; EVOLUTION, MOLECULAR; GENE EXPRESSION REGULATION, BACTERIAL; GLYCINE; HUMANS; MOLECULAR SEQUENCE DATA; PROTEIN CONFORMATION; RNA-BINDING PROTEINS; SEQUENCE HOMOLOGY, AMINO ACID;

ANABAENA; ANABAENA VARIABILIS; CYANOBACTERIA; EUKARYOTA; HELICOBACTER PYLORI; MAMMALIA; PROKARYOTA; SYNECHOCYSTIS; SYNECHOCYSTIS SP.; TREPONEMA PALLIDUM;

EID: 0033134643     PISSN: 03051048     EISSN: None     Source Type: Journal    
DOI: 10.1093/nar/27.9.2029     Document Type: Article

References (44)

1. Sato, N. (1994) Plant Mol. Biol., 24, 819-823.
2. Sato, N. (1995) Nucleic Acids Res., 23, 2161-2167.
3. Sato, N. and Maruyama, K. (1997) Plant Cell Physiol., 38, 81-86.
4. Mulligan, M.E., Jackman, D.M. and Murphy, S.T. (1994) J. Mol. Biol., 235, 1162-1170.
5. Sugita, M. and Sugiura, M. (1994) Nucleic Acids Res., 22, 25-31.
6. Sato, N., Maruyama, K., Nishiyama, Y. and Murata, N. (1997) J. Plant Res., 110, 405-410.
7. Kaneko, T., Sato, S., Kotani, H., Tanaka, A., Asamizu, E., Nakamura, Y., Miyajima, N., Hirosawa, M., Sugiura, M., Sasamoto, S. et al. (1996) DNA Res., 3, 109-136.
8. Smith, C.A., Suzuki, J.Y. and Bauer, C.E. (1996) Plant Mol. Biol., 30, 1307-1314.
9. Sato, N. and Wada, A. (1996) Plant Cell Physiol., 37, 1150-1160.
10. Tomb, J.-F., White, O., Kerlavage, A.R., Clayton, R.A., Sutton, G.G., Fleischmann, R.D., Ketchum, K.A., Klenk, H.P., Gill, S., Dougherty, B.A. et al. (1997)Nature, 388, 539-547.
11. Fraser, C.M., Norris, S.J., Winstock, G.M., White, O., Sutton, G.G., Dodson, R., Gwinn, M., Hickey, E.K., Clayton, R., Ketchum, K.A. et al. (1998) Science, 281, 375-388.
12. Fleischmann, R.D., Adams, M.D., White, O., Clayton, R.A., Kirkness, E.F., Lerlavage, A.R., Bult, C.J., Tomb, J.-F., Doughrty, B.A., Merrick, J.M. et al. (1995) Science, 269, 496-512.
13. Fraser, C.M., Gocayne, J.D., White, O., Adams, M.D., Clayton, R.A., Fleischmann, R.D., Bult, C.J., Kerlavage, A.R., Sutton, G., Kelley, J.M. et al. (1995) Science, 270, 397-403.
14. Bult, C.J., White, O., Olsen, G.J., Zhou, L., Fleischmann, R.D., Sutton, G.G., Blake, J.A., Fitzgerald, L.M., Clayton, R.A., Gocayne, J.D. et al. (1996) Science, 273, 1058-1073.
15. Kunst, F., Ogasawara, N., Moszer, I., Albertini, A.M., Alloni, G., Azevedo, V., Bertero, M.G., Bessières, P., Bolotin, A., Borchert, S., Borriss, R. et al. (1997) Nature, 390, 249-256.
16. Blattner, F.R., Plunkett, G., Block, C.A., Perna, N.T., Burland, V., Riley, M., Collado-Vides, J., Glasner, D., Rode, C.K., Mayhew, G.F. et al. (1997) Science, 277, 1453-1462.
17. Oubridge, C., Ito, N., Evans, P.R., Teo, C.H. and Nagai, K. (1994) Nature, 372, 432-438.
18. Lee, A.L., Kanaar, R., Rio, D.C. and Wemmer, D.E. (1994) Biochemistry, 33, 13775-13786.
19. Bimey, E., Kumar, S. and Krainer, A.R. (1993) Nucleic Acids Res., 21, 5803-5816.
20. Albà, M.M. and Pagès, M. (1998) Trends Plant Sci., 3, 15-21.
21. Schuster, G. and Gruissem, W. (1991) EMBO J., 8, 4163-4170.
22. Dunn, M.A., Brown, K., Lightowlers, R. and Hughes, M.A. (1996) Plant Mol. Biol., 30, 947-959.
23. Carpenter, C.D., Kreps, J.A. and Simon, A.E. (1994) Plant. Physiol., 104, 1015-1025.
24. Sturm, A. (1992) Plant. Physiol., 99, 1689-1692.
25. Didierjean, L., Frendo, P. and Burkard, G. (1992) Plant Mol. Biol., 18, 847-849.
26. Danno, S., Nishiyama, H., Higashitsuji, H., Yokoi, H., Xue, J.-H., Itoh, K., Matsuda,T and Fujita, J. (1997) Biochim. Biophys. Acta, 236, 804-807.
27. Nishiyama, H., Itoh, K., Kaneko, Y., Kishishita, M., Yoshida, O. and Fujita, J. (1997) J. Cell. Biol., 19, 899-908.
28. Uochi, T. and Asashima, M. (1998) Gene, 211, 245-250.
29. Thompson, J.D., Higgins, D.G. and Gibson, T.J. (1994) Nucleic Acids Res., 22, 4673-4680.
30. Wolfertstetter, F., Frech, K., Herrmann, G. and Werner, T. (1996) Comput. Appl. Biosci., 12, 71-80.
31. Saitou, N. and Nei, M. (1987) Mol. Biol. Evol., 4, 406-425.
32. Felsenstein, J. (1985) Evolution, 39, 783-791.
33. Strimmer, K. and von Haeseler, A. (1996) Mol. Biol. Evol., 13, 964-969.
34. Adachi, J. and Hasegawa, M. (1992) Jpn J. Genet., 67, 187-197.
35. Page, R.D.M. (1996) Comput. Appl. Biosci., 12, 357-358.
36. Sato, N. and Nakamura, A. (1998) Nucleic Acids Res., 26, 2192-2199.
37. Graumann, P., Wendrich, T.M., Weber, M.H.W., Schroder, K. and Marahiel, M.A. (1997) Mol. Microbiol., 25, 741-756.
38. Jiang, W., Fang, L. and Inouye, M. (1996) J. Bacteriol., 178, 4919-4925.
39. Los, D.A., Ray, M.K. and Murata, N. (1997) Mol. Microbiol., 25, 1167-1175.
40. Kaneko, T., Matsubayashi, T., Sugita, M. and Sugiura, M. (1996) Plant Mol. Biol., 31, 193-201.
41. Herdman, M., Janvier, M., Rippka, R. and Stanier, R.Y. (1979) J. Gen. Microbiol., 111, 73-85.
42. Bancroft, I., Wolk, C.P. and Oren, E.V. (1989) J. Bacteriol., 171, 5940-5948.
43. Gupta, R.S. (1998) Microbiol. Mol. Biol. Rev., 62, 1435-1491.
44. Graumann, P.L. and Marahiel, M.A. (1998) Trends Biochem. Sci., 23, 286-290.