Differential regulation by low temperature of the gene for an RNA-binding protein, rbpA3, in the cyanobacterium Anabaena variabilis strain M3

Plant and Cell Physiology

Volumn 38, Issue 1, 1997, Pages 81-86

  Sato, Naoki ^a   Maruyama, Kyonoshin ^a,b  

^a TOKYO GAKUGEI UNIVERSITY   (Japan)

^b WASEDA UNIVERSITY   (Japan)

Author keywords

Cold regulation; Cyanobacterium; Molecular phylogeny; RNA binding protein

Indexed keywords

EID: 0030988056     PISSN: 00320781     EISSN: None     Source Type: Journal    
DOI: 10.1093/oxfordjournals.pcp.a029089     Document Type: Article

References (18)

1. Beibin, T.J. and Mulligan, M.E. (1995) Characterization of an RNA-binding protein gene in the cyanobacterium Synechococcus sp. PCC 7942. Genbank accession number L48548.
2. Birney, E., Kumar, S. and Krainer, A.R. (1993) Analysis of the RNA-recognition motif and RS and RGG domains: conservation in metazoan pre-mRNA splicing factors. Nucl. Acids Res. 21: 5803-5816.
3. Brandi, A., Pietroni, P., Gualerzi, C.O. and Pon, C.L. (1996) Post-transcriptional regulation of CspA expression in Escherichia coli. Mol. Microbiol. 19: 231-240.
4. Dolganov, N.A. and Grossman, A.R. (1993) The gene encoding an RNA-binding protein from Synechococcus sp. strain PCC 7942: homology between cyanobacterial and nuclear-encoded chloroplast RNA-binding proteins. Genbank accession number L25435.
5. Felsenstein, J. (1993) PHYLIP (Phytogeny Inference Package) version 3.5c. Distributed by the author. Department of Genetics, University of Washington, Seattle.
6. Goldenberg, D., Azar, I. and Oppenheim, A.B. (1996) Differential mRNA stability of the cspA gene in the cold-shock response of Escherichia coli. Mol. Microbiol. 19: 241-248.
7. Kenan, D.J., Query, C. and Keene, J.D. (1991) RNA recognition: towards identifying determinants of specificity. Trends Biochem. Sci. 16: 214-220.
8. Ludevid, M.D., Freire, M.A., Gómez, J., Burd, C.G., Albericio, F., Giralt, E., Dreyfuss, G. and Pagès, M. (1992) RNA binding characteristics of a 16 kDa glycine-rich protein from maize. Plant J. 2: 999-1003.
9. Mulligan, M.E., Jackman, D.M. and Murphy, S.T. (1994) Heterocyst-forming filamentous cyanobacteria encode proteins that resemble eukaryotic RNA-binding proteins of the RNP family. J. Mol. Biol. 235: 1162-1170.
10. Nagai, K., Oubridge, C., Ito, N., Avis, J. and Evans, P. (1995) The RNP domain: a sequence-specific RNA-binding domain involved in processing and transport of RNA. Trends Biochem. Sci. 20: 235-240.
11. Saitou, N. and Nei, M. (1987) The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4: 406-425.
12. Sato, N. (1992) Cloning of a low-temperature-induced gene Iti2 from the cyanobacterium Anabaena variabilis M3 that is homologous to α-amylases. Plant Mol. Biol. 18: 165-170.
13. Sato, N. (1994) A cold-regulated cyanobacterial gene cluster encodes RNA-binding protein and ribosomal protein S21. Plant Mol. Biol. 24: 819-823.
14. Sato, N. (1995) A family of cold-regulated RNA-binding protein genes in the cyanobacterium Anabaena variabilis M3. Nucl. Acids Res. 23: 2161-2167.
15. Sugita, M. and Sugiura, M. (1994) The existence of eukaryotic ribonudeoprotein consensus sequence-type RNA-binding proteins in a prokaryote, Synechococcus 6301. Nucl. Acids Res. 22: 25-31.
16. Thompson, J.D., Higgins, D.G. and Gibson, T.J. (1994) CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucl. Acids Res. 22: 4673-4680.
17. Williams, J.G. and Mason, P.J. (1985) Hybridization in the analysis of RNA. in Nucleic Acid Hybridization. Edited by Hames, B.D. and Higgins, S.J. pp. 139-160. IRL Press, Oxford.
18. Ye, L. and Sugiura, M. (1992) Domains required for nucleic acid binding activities in chloroplast ribonucleoproteins. Nucl. Acids Res. 20: 6275-6279.