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Volumn 145, Issue 6, 1999, Pages 1289-1298

A novel tRNA-associated locus (trl) from Helicobacter pylori is co-transcribed with tRNA(Gly) reveals genetic diversity

Author keywords

Arbitrarily primed PCR; Diversity; Horizontal transfer; tRNA

Indexed keywords

BACTERIAL RNA; COMPLEMENTARY DNA; GLYCINE TRANSFER RNA; TRANSFER RNA;

EID: 0033011932     PISSN: 13500872     EISSN: None     Source Type: Journal    
DOI: 10.1099/13500872-145-6-1289     Document Type: Article
Times cited : (6)

References (52)
  • 2
    • 0033552961 scopus 로고    scopus 로고
    • Genomic sequence comparison of two unrelated isolates of the human gastric pathogen Helicobacter pylori
    • Aim, R. A., Ling, L-S. L., Moir, D. T. & 20 other authors (1999). Genomic sequence comparison of two unrelated isolates of the human gastric pathogen Helicobacter pylori. Nature 397, 176-180.
    • (1999) Nature , vol.397 , pp. 176-180
    • Aim, R.A.1    Ling, L.-S.L.2    Moir, D.T.3
  • 4
    • 0031296594 scopus 로고    scopus 로고
    • The Helicobacter pylori genome sequence: Genetic factors for long life in the gastric mucosa
    • Berg, D. E., Hoffman, P. S., Appelmelk, B. J. & Kusters, J. G. (1997). The Helicobacter pylori genome sequence: genetic factors for long life in the gastric mucosa. Trends Microbiol 5, 468-474.
    • (1997) Trends Microbiol , vol.5 , pp. 468-474
    • Berg, D.E.1    Hoffman, P.S.2    Appelmelk, B.J.3    Kusters, J.G.4
  • 5
    • 0026052209 scopus 로고
    • A novel RNA product of the tryT operon of Escherichia coli
    • Bösl, M. & Kersten, H. (1991). A novel RNA product of the tryT operon of Escherichia coli. Nucleic Acids Res 19, 5863-5870.
    • (1991) Nucleic Acids Res , vol.19 , pp. 5863-5870
    • Bösl, M.1    Kersten, H.2
  • 6
    • 0029033611 scopus 로고
    • Genetic and molecular analysis of the tRNA-tufB operon of the mycobacterium Stigmatella aurantica
    • Bremaud, L., Fremaux, C., Laalami, S. & Cenatiempo, Y. (1995). Genetic and molecular analysis of the tRNA-tufB operon of the mycobacterium Stigmatella aurantica. Nucleic Acids Res 23, 1737-1743.
    • (1995) Nucleic Acids Res , vol.23 , pp. 1737-1743
    • Bremaud, L.1    Fremaux, C.2    Laalami, S.3    Cenatiempo, Y.4
  • 7
    • 0030947959 scopus 로고    scopus 로고
    • High-level genetic diversity in the vapD chromosomal region of Helicobacter pylori
    • Cao, P. & Cover, T. L. (1997). High-level genetic diversity in the vapD chromosomal region of Helicobacter pylori. J Bacteriol 179, 2852-2856.
    • (1997) J Bacteriol , vol.179 , pp. 2852-2856
    • Cao, P.1    Cover, T.L.2
  • 9
    • 0028877016 scopus 로고
    • A role for bacteriophage in the evolution and transfer of bacterial virulence determinants
    • Cheetham, B. F. & Katz, M. E. (1995). A role for bacteriophage in the evolution and transfer of bacterial virulence determinants. Mol Microbiol 18, 201-208.
    • (1995) Mol Microbiol , vol.18 , pp. 201-208
    • Cheetham, B.F.1    Katz, M.E.2
  • 10
    • 0027173990 scopus 로고
    • Molecular characterization of the 128-kDa immunodominant antigen of Helicobacter pylori associated with cytotoxicity and duodenal ulcer
    • Covacci, A., Censini, S., Bugnoli, M. & 8 other authors (1993). Molecular characterization of the 128-kDa immunodominant antigen of Helicobacter pylori associated with cytotoxicity and duodenal ulcer. Proc Natl Acad Sci USA 90, 5791-5795.
    • (1993) Proc Natl Acad Sci USA , vol.90 , pp. 5791-5795
    • Covacci, A.1    Censini, S.2    Bugnoli, M.3
  • 11
    • 0023661095 scopus 로고
    • The tRNA-tufB operon transcription termination and processing upstream from tufB
    • van Delft, J. H. M., Schmidt, D. S. & Bosch, L. (1987). The tRNA-tufB operon transcription termination and processing upstream from tufB. J Mol Biol 197, 647-657.
    • (1987) J Mol Biol , vol.197 , pp. 647-657
    • Van Delft, J.H.M.1    Schmidt, D.S.2    Bosch, L.3
  • 14
    • 0025823864 scopus 로고
    • Essential role of urease in pathogenesis of gastritis induced by Helicobacter pylori in gnotobiotic piglets
    • Eaton, K. A., Brooks, C. L., Morgan, D. R. & Krakowka, S. (1991). Essential role of urease in pathogenesis of gastritis induced by Helicobacter pylori in gnotobiotic piglets. Infect Immun 59, 2470-2475.
    • (1991) Infect Immun , vol.59 , pp. 2470-2475
    • Eaton, K.A.1    Brooks, C.L.2    Morgan, D.R.3    Krakowka, S.4
  • 15
    • 0025653682 scopus 로고
    • Adherence of Helicobacter pylori cells and their surface components to HeLa cell membranes
    • Fauchére, J.-L. & Blaser, M. J. (1990). Adherence of Helicobacter pylori cells and their surface components to HeLa cell membranes. Microb Pathog 9, 427-439.
    • (1990) Microb Pathog , vol.9 , pp. 427-439
    • Fauchére, J.-L.1    Blaser, M.J.2
  • 16
    • 0030901705 scopus 로고    scopus 로고
    • Pathogenicity islands of virulent bacteria: Structure, function and impact on microbial evolution
    • Hacker, J., Blum-Oehler, G., Mühldorfer, I. & Tschäpe, H. (1997). Pathogenicity islands of virulent bacteria: structure, function and impact on microbial evolution. Mol Microbiol 23, 1089-1097.
    • (1997) Mol Microbiol , vol.23 , pp. 1089-1097
    • Hacker, J.1    Blum-Oehler, G.2    Mühldorfer, I.3    Tschäpe, H.4
  • 17
    • 0022472593 scopus 로고
    • Intragenic variation by site-specific recombination in the cryptic plasmid of Neisseria gonorrhoeae
    • Hagblom, P., Korch, C., Jonsson, A.-B. & Normark, S. (1986). Intragenic variation by site-specific recombination in the cryptic plasmid of Neisseria gonorrhoeae. J Bacteriol 167, 231-237.
    • (1986) J Bacteriol , vol.167 , pp. 231-237
    • Hagblom, P.1    Korch, C.2    Jonsson, A.-B.3    Normark, S.4
  • 18
    • 0027529352 scopus 로고
    • Molecular analysis of a cytotoxin-converting phage, ΦCTX, of Pseudomonas aeruginosa: Structure of the attP-cos-ctx region and integration into the serine tRNA gene
    • Hayashi, T., Matsumoto, H., Ohnishi, M. & Terawaki, Y. (1993). Molecular analysis of a cytotoxin-converting phage, ΦCTX, of Pseudomonas aeruginosa: structure of the attP-cos-ctx region and integration into the serine tRNA gene. Mol Microbiol 7, 657-667.
    • (1993) Mol Microbiol , vol.7 , pp. 657-667
    • Hayashi, T.1    Matsumoto, H.2    Ohnishi, M.3    Terawaki, Y.4
  • 20
    • 0031053290 scopus 로고    scopus 로고
    • Analysis of the boundaries of Salmonella pathogenicity island 2 and the corresponding chromosomal region of Escherichia coli K-12
    • Hensel, M., Shea, J. E., Bäumler, A. J., Glesson, C., Blattner, F. & Holden, D. W. (1997). Analysis of the boundaries of Salmonella pathogenicity island 2 and the corresponding chromosomal region of Escherichia coli K-12. J Bacteriol 179, 1105-1111.
    • (1997) J Bacteriol , vol.179 , pp. 1105-1111
    • Hensel, M.1    Shea, J.E.2    Bäumler, A.J.3    Glesson, C.4    Blattner, F.5    Holden, D.W.6
  • 21
    • 0028879978 scopus 로고
    • Genetic organization of a small cryptic plasmid of Helicobacter pylori
    • Heuermann, D. & Haas, R. (1995). Genetic organization of a small cryptic plasmid of Helicobacter pylori. Gene 165, 17-24.
    • (1995) Gene , vol.165 , pp. 17-24
    • Heuermann, D.1    Haas, R.2
  • 22
    • 0025793652 scopus 로고
    • Retronphage ΦR173 : An E. coli phage that contains a retroelement and integrates into a tRNA gene
    • Inouye, S., Sunshine, M. G., Six, E. W. & Inouye, M. (1991). Retronphage ΦR173 : an E. coli phage that contains a retroelement and integrates into a tRNA gene. Science 252, 969-971.
    • (1991) Science , vol.252 , pp. 969-971
    • Inouye, S.1    Sunshine, M.G.2    Six, E.W.3    Inouye, M.4
  • 23
    • 0029899916 scopus 로고    scopus 로고
    • Variability of gene order in different Helicobacter pylori strains contributes to genome diversity
    • Jiang, Q., Hiratsuka, K. & Taylor, D. E. (1996). Variability of gene order in different Helicobacter pylori strains contributes to genome diversity. Mol Microbiol 20, 833-842.
    • (1996) Mol Microbiol , vol.20 , pp. 833-842
    • Jiang, Q.1    Hiratsuka, K.2    Taylor, D.E.3
  • 24
    • 0026056409 scopus 로고
    • Characterization of a plasmid from Helicobacter pylori encoding a replication protein common to plasmids in Gram-positive bacteria
    • Kleanthous, H., Clayton, C. & Tabaqchali, S. (1991). Characterization of a plasmid from Helicobacter pylori encoding a replication protein common to plasmids in Gram-positive bacteria. Mol Microbiol 5, 2377-2389.
    • (1991) Mol Microbiol , vol.5 , pp. 2377-2389
    • Kleanthous, H.1    Clayton, C.2    Tabaqchali, S.3
  • 25
    • 0345612098 scopus 로고    scopus 로고
    • The use of differential display-PCR to isolate and characterise a Legionella pneumophila locus induced during the intracellular infection of macrophages
    • Kwaik, Y. A. & Pederson, L. L. (1996). The use of differential display-PCR to isolate and characterise a Legionella pneumophila locus induced during the intracellular infection of macrophages. Mol Microbiol 21, 543-556.
    • (1996) Mol Microbiol , vol.21 , pp. 543-556
    • Kwaik, Y.A.1    Pederson, L.L.2
  • 26
    • 0026769011 scopus 로고
    • Cloning and genetic characterization of a Helicobacter pylori flagellin gene
    • Leying, H., Suerbaum, S., Geis, G. & Haas, R. (1992). Cloning and genetic characterization of a Helicobacter pylori flagellin gene. Mol Microbiol 6, 2863-2874.
    • (1992) Mol Microbiol , vol.6 , pp. 2863-2874
    • Leying, H.1    Suerbaum, S.2    Geis, G.3    Haas, R.4
  • 27
    • 0043239980 scopus 로고    scopus 로고
    • An RNA subtractive method for library construction
    • Edited by P. A. Kreig. New York: Wiley-Liss
    • Li, W.-B. & Gruber, C. E. (1996). An RNA subtractive method for library construction. In A Laboratory Guide to RNA: Isolation, Analysis, and Synthesis, pp. 323-338. Edited by P. A. Kreig. New York: Wiley-Liss.
    • (1996) A Laboratory Guide to RNA: Isolation, Analysis, and Synthesis , pp. 323-338
    • Li, W.-B.1    Gruber, C.E.2
  • 28
    • 0031015544 scopus 로고    scopus 로고
    • Bacteriophage T12 of Streptococcus pyogenes integrates into the gene encoding a serine tRNA
    • McShan, W. M., Tang, Y.-F. & Ferretti, J. J. (1997). Bacteriophage T12 of Streptococcus pyogenes integrates into the gene encoding a serine tRNA. Mol Microbiol 23, 719-728.
    • (1997) Mol Microbiol , vol.23 , pp. 719-728
    • McShan, W.M.1    Tang, Y.-F.2    Ferretti, J.J.3
  • 29
    • 0023404358 scopus 로고
    • Site-specific integration and excision of pMEA100 in Nocardia mediterranei
    • Madon, J., Moretti, P. & Hütter, R. (1987). Site-specific integration and excision of pMEA100 in Nocardia mediterranei. Mol Gen Genet 209, 257-264.
    • (1987) Mol Gen Genet , vol.209 , pp. 257-264
    • Madon, J.1    Moretti, P.2    Hütter, R.3
  • 30
    • 0031736760 scopus 로고    scopus 로고
    • Helicobacter pylori - A conundrum of genetic diversity
    • Marshall, D. G., Dundon, W. G., Beesley, S. M. & Smyth, C. J. (1998). Helicobacter pylori - a conundrum of genetic diversity. Microbiology 144, 2925-2939.
    • (1998) Microbiology , vol.144 , pp. 2925-2939
    • Marshall, D.G.1    Dundon, W.G.2    Beesley, S.M.3    Smyth, C.J.4
  • 31
    • 0029117273 scopus 로고
    • Characterization of a 3-5-kb plasmid from Helicobacter pylori
    • Minnis, J., Taylor, T., Knesek, J., Peterson, W. & McIntire, S. (1995). Characterization of a 3-5-kb plasmid from Helicobacter pylori. Plasmid 34, 22-36.
    • (1995) Plasmid , vol.34 , pp. 22-36
    • Minnis, J.1    Taylor, T.2    Knesek, J.3    Peterson, W.4    McIntire, S.5
  • 33
    • 0030975595 scopus 로고    scopus 로고
    • Risk factor for gastric cancer in people with CagA positive or CagA negative Helicobacter pylori infection
    • Parsonnet, J., Friedman, G. D., Orentreich, N. & Vogelman, H. (1997). Risk factor for gastric cancer in people with CagA positive or CagA negative Helicobacter pylori infection. Gut 40, 297-301.
    • (1997) Gut , vol.40 , pp. 297-301
    • Parsonnet, J.1    Friedman, G.D.2    Orentreich, N.3    Vogelman, H.4
  • 34
    • 0031738385 scopus 로고    scopus 로고
    • Adherence to gastric epithelial cells induces expression of a Helicobacter pylori gene, iceA, that is associated with clinical outcome
    • Peek, R. M., Jr, Thompson, S. A., Donahue, J. P., Tham, K. T., Atherton, J. C., Blaser, M. J. & Miller, G. G. (1998). Adherence to gastric epithelial cells induces expression of a Helicobacter pylori gene, iceA, that is associated with clinical outcome. Proc Assoc Am Physicians 110, 531-544.
    • (1998) Proc Assoc Am Physicians , vol.110 , pp. 531-544
    • Peek R.M., Jr.1    Thompson, S.A.2    Donahue, J.P.3    Tham, K.T.4    Atherton, J.C.5    Blaser, M.J.6    Miller, G.G.7
  • 35
    • 0030608954 scopus 로고    scopus 로고
    • 2 gene of Corynebacterium diphtheriae is the chromosomal integration site for toxinogenic bacteriophage
    • 2 gene of Corynebacterium diphtheriae is the chromosomal integration site for toxinogenic bacteriophage. Mol Microbiol 25, 1179-1181.
    • (1997) Mol Microbiol , vol.25 , pp. 1179-1181
    • Ratti, G.1    Covacci, A.2    Rappuoli, R.3
  • 36
    • 0024967060 scopus 로고
    • Transfer RNA genes serve as integration sites for prokaryotic genetic elements
    • Reiter, W.-D., Palm, P. & Yeats, S. (1989). Transfer RNA genes serve as integration sites for prokaryotic genetic elements. Nucleic Acids Res 17, 1907-1914.
    • (1989) Nucleic Acids Res , vol.17 , pp. 1907-1914
    • Reiter, W.-D.1    Palm, P.2    Yeats, S.3
  • 37
    • 0031047137 scopus 로고    scopus 로고
    • Integration of heterologous plasmid DNA into multiple sites on the genome of Campylobacter coli following natural transformation
    • Richardson, P. T. & Park, S. F. (1997). Integration of heterologous plasmid DNA into multiple sites on the genome of Campylobacter coli following natural transformation. J Bacteriol 179, 1809-1812.
    • (1997) J Bacteriol , vol.179 , pp. 1809-1812
    • Richardson, P.T.1    Park, S.F.2
  • 38
    • 0029094915 scopus 로고
    • tRNA genes and pathogenicity islands: Influence on virulence and metabolic properties of uropathogenic Escherichia coli
    • Ritter, A., Blum, G., Emödy, L., Kerenyi, M., Böck, A., Neuhierl, B., Rabsch, W., Scheutz, F. & Hacker, J. (1995). tRNA genes and pathogenicity islands: influence on virulence and metabolic properties of uropathogenic Escherichia coli. Mol Microbiol 17, 109-121.
    • (1995) Mol Microbiol , vol.17 , pp. 109-121
    • Ritter, A.1    Blum, G.2    Emödy, L.3    Kerenyi, M.4    Böck, A.5    Neuhierl, B.6    Rabsch, W.7    Scheutz, F.8    Hacker, J.9
  • 39
    • 0019813765 scopus 로고
    • The tyrTlocus: Termination and processing of a complex transcript
    • Rossi, J., Egan, J., Hudson, L. & Landy, A. (1981). The tyrTlocus: termination and processing of a complex transcript. Cell 26, 305-314.
    • (1981) Cell , vol.26 , pp. 305-314
    • Rossi, J.1    Egan, J.2    Hudson, L.3    Landy, A.4
  • 41
    • 0031931361 scopus 로고    scopus 로고
    • Simple sequence repeats in the Helicobacter pylori genome
    • Saunders, N. J., Peden, J. F., Hood, D. W. & Moxon, E. R. (1998). Simple sequence repeats in the Helicobacter pylori genome. Mol Microbiol 27, 1091-1098.
    • (1998) Mol Microbiol , vol.27 , pp. 1091-1098
    • Saunders, N.J.1    Peden, J.F.2    Hood, D.W.3    Moxon, E.R.4
  • 42
    • 0025277691 scopus 로고
    • Bacteriophages in Helicobacter (Campylobacter) pylori
    • Schmid, E. N., von Recklinghausen, G. & Ansorg, R. (1990). Bacteriophages in Helicobacter (Campylobacter) pylori. J Med Microbiol 32, 101-104.
    • (1990) J Med Microbiol , vol.32 , pp. 101-104
    • Schmid, E.N.1    Von Recklinghausen, G.2    Ansorg, R.3
  • 43
    • 0016154301 scopus 로고
    • The 3′-terminal sequence of Escherichia coli 16S ribosomal RNA: Complementary to nonsense triplets and ribosome binding sites
    • Shine, J. & Dalgarno, L. (1974). The 3′-terminal sequence of Escherichia coli 16S ribosomal RNA: complementary to nonsense triplets and ribosome binding sites. Proc Natl Acad Sci USA 71, 1342-1346.
    • (1974) Proc Natl Acad Sci USA , vol.71 , pp. 1342-1346
    • Shine, J.1    Dalgarno, L.2
  • 44
    • 0032574728 scopus 로고    scopus 로고
    • Evolution of rhizobia by acquisition of a 500-kb symbiosis island that integrates into a phetRNA gene
    • Sullivan, J. T. & Ronson, C. W. (1998). Evolution of rhizobia by acquisition of a 500-kb symbiosis island that integrates into a phetRNA gene. Proc Natl Acad Sci USA 95, 5145-5149.
    • (1998) Proc Natl Acad Sci USA , vol.95 , pp. 5145-5149
    • Sullivan, J.T.1    Ronson, C.W.2
  • 45
    • 0026665395 scopus 로고
    • Construction of a Helicobacter pylori genome map and demonstration of diversity at the genome level
    • Taylor, D. E., Eaton, M., Chang, N. & Salama, S. M. (1992). Construction of a Helicobacter pylori genome map and demonstration of diversity at the genome level. J Bacteriol 174, 6800-6806.
    • (1992) J Bacteriol , vol.174 , pp. 6800-6806
    • Taylor, D.E.1    Eaton, M.2    Chang, N.3    Salama, S.M.4
  • 46
    • 0032454316 scopus 로고    scopus 로고
    • Cloning and expression of the Campylobacter jejuni lon gene detected by RNA arbitrarily primed PCR
    • Thies, F. L., Hartung, H.-P. & Giegerich, G. (1998). Cloning and expression of the Campylobacter jejuni lon gene detected by RNA arbitrarily primed PCR. FEMS Microbiol Lett 165, 329-334.
    • (1998) FEMS Microbiol Lett , vol.165 , pp. 329-334
    • Thies, F.L.1    Hartung, H.-P.2    Giegerich, G.3
  • 47
    • 0030835739 scopus 로고    scopus 로고
    • The complete genome sequence of the gastric pathogen Helicobacter pylori
    • Tomb, J.-F., White, O., Kerlavage, A. R. & 39 other authors (1997). The complete genome sequence of the gastric pathogen Helicobacter pylori. Nature 388, 539-547.
    • (1997) Nature , vol.388 , pp. 539-547
    • Tomb, J.-F.1    White, O.2    Kerlavage, A.R.3
  • 48
    • 0027230726 scopus 로고
    • Cloning and expression of a high-molecular-mass antigen of Helicobacter pylori: Evidence of linkage to cytotoxin production
    • Tummuru, M. K. R., Cover, T. L. & Blaser, M. J. (1993). Cloning and expression of a high-molecular-mass antigen of Helicobacter pylori: evidence of linkage to cytotoxin production. Infect Immun 61, 1799-1809.
    • (1993) Infect Immun , vol.61 , pp. 1799-1809
    • Tummuru, M.K.R.1    Cover, T.L.2    Blaser, M.J.3
  • 50
    • 0028008621 scopus 로고
    • Stress-inducible gene of Salmonella typhimurium identified by arbitrarily primed PCR of RNA
    • Wong, K. & McClelland, M. (1994). Stress-inducible gene of Salmonella typhimurium identified by arbitrarily primed PCR of RNA. Proc Natl Acad Sci USA 91, 639-643.
    • (1994) Proc Natl Acad Sci USA , vol.91 , pp. 639-643
    • Wong, K.1    McClelland, M.2
  • 51
    • 0028860071 scopus 로고
    • Analysis of expression of CagA and VacA virulence factors in 43 strains of Helicobacter pylori reveals that clinical isolates can be divided into two major types and that CagA is not necessary for expression of the vacuolating cytotoxin
    • Xiang, Z., Censini, S., Bayelli, P. F., Telford, J. L., Figura, N., Rappuoli, R. & Covacci, A. (1995). Analysis of expression of CagA and VacA virulence factors in 43 strains of Helicobacter pylori reveals that clinical isolates can be divided into two major types and that CagA is not necessary for expression of the vacuolating cytotoxin. Infect Immun 63, 94-98.
    • (1995) Infect Immun , vol.63 , pp. 94-98
    • Xiang, Z.1    Censini, S.2    Bayelli, P.F.3    Telford, J.L.4    Figura, N.5    Rappuoli, R.6    Covacci, A.7
  • 52
    • 0042368152 scopus 로고    scopus 로고
    • The BvgAS virulence control system regulates type III secretion in Bordetella bronchiseptica
    • Yuk, M. H., Harvill, E. T. & Miller, J. F. (1998). The BvgAS virulence control system regulates type III secretion in Bordetella bronchiseptica. Mol Microbiol 28, 945-959.
    • (1998) Mol Microbiol , vol.28 , pp. 945-959
    • Yuk, M.H.1    Harvill, E.T.2    Miller, J.F.3


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