-
3
-
-
0029974002
-
Evaluation of threading specificity and accuracy
-
Bryant SH. Evaluation of threading specificity and accuracy. Proteins 1996;26:172-185.
-
(1996)
Proteins
, vol.26
, pp. 172-185
-
-
Bryant, S.H.1
-
4
-
-
0029937427
-
Scores for sequence searches and alignments
-
Henikoff S. Scores for sequence searches and alignments. Curr Opin Struct Biol 1996;6:353-360.
-
(1996)
Curr Opin Struct Biol
, vol.6
, pp. 353-360
-
-
Henikoff, S.1
-
5
-
-
0032509105
-
Sequence comparisons using multiple sequences detect three times as many remote homologues as pairwise methods
-
Park J, Karplus K, Barrett C, et al. Sequence comparisons using multiple sequences detect three times as many remote homologues as pairwise methods. J Mol Biol 1998;284:1201-1210.
-
(1998)
J Mol Biol
, vol.284
, pp. 1201-1210
-
-
Park, J.1
Karplus, K.2
Barrett, C.3
-
6
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
-
Altschul SF, Madden TL, Schaffer AA, et al. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res 1997;197;25:3389-3402.
-
(1997)
Nucleic Acids Res
, vol.197
, Issue.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schaffer, A.A.3
-
7
-
-
0028818340
-
Protein structure prediction by threading methods: Evaluation of current techniques
-
Lemer CM, Rooman MJ, Wodak SJ. Protein structure prediction by threading methods: evaluation of current techniques. Proteins 1995;23:337-355.
-
(1995)
Proteins
, vol.23
, pp. 337-355
-
-
Lemer, C.M.1
Rooman, M.J.2
Wodak, S.J.3
-
8
-
-
0031307020
-
Competitive assessment of protein fold recognition and alignment accuracy
-
Levitt M. Competitive assessment of protein fold recognition and alignment accuracy. Proteins Suppl 1997;1:92-104.
-
(1997)
Proteins Suppl
, vol.1
, pp. 92-104
-
-
Levitt, M.1
-
9
-
-
0029086473
-
Threading analysis suggests that the obese gene product may be a helical cytokine
-
Madej T, Boguski MS, Bryant SH. Threading analysis suggests that the obese gene product may be a helical cytokine. FEBS Lett 1995;373:13-18.
-
(1995)
FEBS Lett
, vol.373
, pp. 13-18
-
-
Madej, T.1
Boguski, M.S.2
Bryant, S.H.3
-
10
-
-
0032606039
-
Critical assessment of methods of protein structure prediction (CASP): Round III
-
Moult J, Hubbard T, Fidelis K, Pedersen JT. Critical assessment of methods of protein structure prediction (CASP): round III. Proteins Suppl 1999;3:2-6.
-
(1999)
Proteins Suppl
, vol.3
, pp. 2-6
-
-
Moult, J.1
Hubbard, T.2
Fidelis, K.3
Pedersen, J.T.4
-
11
-
-
0032605908
-
Structure classification-based assessment of CASP3 predictions for the fold recognition targets
-
Murzin AG. Structure classification-based assessment of CASP3 predictions for the fold recognition targets. Proteins Suppl 1999; 3:88-103.
-
(1999)
Proteins Suppl
, vol.3
, pp. 88-103
-
-
Murzin, A.G.1
-
12
-
-
0030847766
-
Protein Data Bank archives of three-dimensional macromolecular structures
-
Abola EE, Sussman JL, Prilusky J, Manning NO. Protein Data Bank archives of three-dimensional macromolecular structures. Methods Enzymol 1997;277:556-571.
-
(1997)
Methods Enzymol
, vol.277
, pp. 556-571
-
-
Abola, E.E.1
Sussman, J.L.2
Prilusky, J.3
Manning, N.O.4
-
14
-
-
0345286733
-
-
http://www.ncbi.nlm.nih.gov/Structure/VAST/nrpdb.html
-
-
-
-
15
-
-
0027318317
-
An empirical energy function for threading protein sequence through folding motif
-
Bryant SH, Lawrence CE. An empirical energy function for threading protein sequence through folding motif. Proteins 1993; 16:92-112.
-
(1993)
Proteins
, vol.16
, pp. 92-112
-
-
Bryant, S.H.1
Lawrence, C.E.2
-
17
-
-
0033120222
-
Identification of homologous core structures
-
Matsuo Y, Bryant SH. Identification of homologous core structures. Proteins 1999;35:70-79.
-
(1999)
Proteins
, vol.35
, pp. 70-79
-
-
Matsuo, Y.1
Bryant, S.H.2
-
19
-
-
0030941114
-
Embedding strategies for effective use of information from multiple sequence alignments
-
Henikoff S, Henikoff JG. Embedding strategies for effective use of information from multiple sequence alignments. Protein Sci 1997; 6:698-705.
-
(1997)
Protein Sci
, vol.6
, pp. 698-705
-
-
Henikoff, S.1
Henikoff, J.G.2
-
20
-
-
0032940544
-
SCOP: A structural classification of proteins database
-
Hubbard TJP, Ailey B, Brenner SE, Murzin AG, Chothia C. SCOP: a structural classification of proteins database. Nucleic Acids Res 1999;27:254-256.
-
(1999)
Nucleic Acids Res
, vol.27
, pp. 254-256
-
-
Hubbard, T.J.P.1
Ailey, B.2
Brenner, S.E.3
Murzin, A.G.4
Chothia, C.5
-
21
-
-
0033104008
-
The crystal structure of methyglyoxal synthase from Eschericia coli
-
Saadat D, Harrison DH. The crystal structure of methyglyoxal synthase from Eschericia coli. Structure 1999;7:309-317.
-
(1999)
Structure
, vol.7
, pp. 309-317
-
-
Saadat, D.1
Harrison, D.H.2
-
22
-
-
0030957783
-
Structure of carbamoyl phosphate synthetase: A journey of 96 Angstroms from substrate to product
-
Thoden JB, Holden HM, Wesenberg G, Raushel FM, Rayment I. Structure of carbamoyl phosphate synthetase: a journey of 96 Angstroms from substrate to product. Biochemistry 1997;36:6305-6316.
-
(1997)
Biochemistry
, vol.36
, pp. 6305-6316
-
-
Thoden, J.B.1
Holden, H.M.2
Wesenberg, G.3
Raushel, F.M.4
Rayment, I.5
-
23
-
-
0345718368
-
-
http://www.ncbi.nlm.nih.gov/Structure/RESEARCH/casp3/
-
-
-
-
24
-
-
0031296896
-
Measures of threading specificity and accuracy
-
Marchler-Bauer A, Bryant SH. Measures of threading specificity and accuracy. Proteins Suppl 1997;1:74-82.
-
(1997)
Proteins Suppl
, vol.1
, pp. 74-82
-
-
Marchler-Bauer, A.1
Bryant, S.H.2
-
26
-
-
0345286729
-
-
http://predictioncenter.llnl.gov/casp3/Casp3.html
-
-
-
-
27
-
-
0030334647
-
Optimum superimposition of protein structures: Ambiguities and implications
-
Feng ZK, Sippl MJ. Optimum superimposition of protein structures: ambiguities and implications. Fold Des 1996;1:123-132.
-
(1996)
Fold Des
, vol.1
, pp. 123-132
-
-
Feng, Z.K.1
Sippl, M.J.2
-
28
-
-
0032104477
-
How far divergent evolution goes in proteins
-
Murzin AG. How far divergent evolution goes in proteins. Curr Opin Struct Biol 1998;8:380-387.
-
(1998)
Curr Opin Struct Biol
, vol.8
, pp. 380-387
-
-
Murzin, A.G.1
-
29
-
-
0024468229
-
Crystal structure of chaperone protein PapD reveals an immunoglobulin fold
-
Holmgren A, Branden CI. Crystal structure of chaperone protein PapD reveals an immunoglobulin fold. Nature 1989;342:248-251.
-
(1989)
Nature
, vol.342
, pp. 248-251
-
-
Holmgren, A.1
Branden, C.I.2
-
30
-
-
0032876705
-
CASP3 comparative modeling evaluation
-
Jones TA, Kleywegt GJ. CASP3 comparative modeling evaluation. Proteins Suppl 1999;3:30-46.
-
(1999)
Proteins Suppl
, vol.3
, pp. 30-46
-
-
Jones, T.A.1
Kleywegt, G.J.2
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