Simulation of the HIV-1 Vpu transmembrane domain as a pentameric bundle

FEBS Letters

Volumn 431, Issue 2, 1998, Pages 143-148

  Moore, Preston B ^a   Zhong, Qingfeng ^a   Husslein, Thomas ^a   Klein, Michael L ^a  

^a UNIVERSITY OF PENNSYLVANIA   (United States)

Author keywords

Human immunodeficiency virus 1; Ion channel; Molecular dynamics; Transmembrane helix; Vpu

Indexed keywords

VPU PROTEIN;

ARTICLE; COMPUTER SIMULATION; HUMAN IMMUNODEFICIENCY VIRUS 1; MEMBRANE STRUCTURE; MOLECULAR DYNAMICS; PRIORITY JOURNAL; PROTEIN DOMAIN;

AMINO ACID SEQUENCE; COMPUTER SIMULATION; GENE PRODUCTS, VPU; HIV-1; ION CHANNELS; MODELS, MOLECULAR; MOLECULAR CONFORMATION; MOLECULAR SEQUENCE DATA;

HUMAN IMMUNODEFICIENCY VIRUS; HUMAN IMMUNODEFICIENCY VIRUS 1; RNA VIRUSES;

EID: 0032540881     PISSN: 00145793     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0014-5793(98)00714-5     Document Type: Article

References (18)

1. Schubert, U., Bour, S., Ferrer-Montiel, A.V., Montal, M., Maldarelli, F. and Strebel, K. (1996) J. Virol. 70, 809-819.
2. Willbold, D., Hoffmann, S. and Rosch, P. (1997) Eur. J. Biochem. 245, 581-585.
3. Schubert, U., Ferrer-Montiel, A.V., Oblatt-Montal, M., Henklein, P., Strebel, K. and Montal, M. (1996) FEBS Lett. 398, 12-18.
4. Lamb, R.A. and Pinto, L.H. (1997) Virology 229, 1-11.
5. Ewart, G.D., Sutherland, T., Gage, P.W. and Cox, G.B. (1996) J. Virol. 70, 7108-7115.
6. Grice, A.L., Kerr, I.D. and Sansom, M.S.P. (1997) FEBS Lett. 405, 299-304.
7. Martyna, G.J., Tuckerman, M.E., Tobias, D.J. and Klein, M.L. (1996) Mol. Phys. 87, 1117-1157.
8. Moore, P.B. and Klein, M.L. (1997) Implementation of a General Integration for Extended System Molecular Dynamics, Technical Report, University of Pennsylvania, 1997.
9. Allen, M.P. and Tildesley, D.J. (1987) Computer Simulations of Liquids, Oxford.
10. Zhong, Q., Jiang, Q., Moore, P.B., Newns, D.M. and Klein, M.L. (1998) Biophys. J. 74, 3-10.
11. Toukan, K. and Rahman, A. (1985) Phys. Rev. B. 31, 2643-2648.
12. Siepmann, J.I., Karaborni, S. and Smit, B. (1993) Nature 365, 330-332.
13. Brooks, B.R., Bruccoleri, R.E., Olafson, B.D., States, D.J., Swaminathan, S. and Karplus, M. (1983) J. Comp. Chem. 4, 187-217.
14. Jorgensen, W.L. and Tirado-Rives, J. (1998) J. Am. Coll. Surg. 110, 1657-1666.
15. Gennis, R.B. (1989) Biomembranes: Molecular Structure and Function, Springer-Verlag, New York, NY.
16. Kerr, I.D., Sankararamakrishnan, R., Smart, O.S. and Sansom, M.S.P. (1994) Biophys. J. 67, 1501-1515.
17. Doyle, D.A., Cabral, J.M., Pfuetzner, R.A., Kuo, A.L., Gulbis, J.M., Cohen, S.L., Chait, B.R. and MacKinnon, R. (1998) Science 280, 69-77.
18. Zhong, Q., Moore, P.B. and Klein, M.L. (1998) FEBS Lett. 427, 267-274.