-
1
-
-
0025183708
-
Basic local alignment search tool
-
Altschul, S. F., W. Gish, W. Miller, E. W. Myers, and D. J. Lipman. 1990. Basic local alignment search tool. J. Mol. Biol. 215:403-410.
-
(1990)
J. Mol. Biol.
, vol.215
, pp. 403-410
-
-
Altschul, S.F.1
Gish, W.2
Miller, W.3
Myers, E.W.4
Lipman, D.J.5
-
2
-
-
0021711731
-
Simple, rapid, and quantitative release of periplasmic proteins by chloroform
-
Ames, G. F.-L., C. Prody, and S. Kustu. 1984. Simple, rapid, and quantitative release of periplasmic proteins by chloroform. J. Bacteriol. 160:1181-1183.
-
(1984)
J. Bacteriol.
, vol.160
, pp. 1181-1183
-
-
Ames, G.F.-L.1
Prody, C.2
Kustu, S.3
-
3
-
-
0028212853
-
A hydrophobic mu-tant of Rhizobium etli altered in nodulation competitiveness and growth in the rhizosphere
-
Araujo, R. S., E. A. Robleto, and J. Handelsman. 1994. A hydrophobic mu-tant of Rhizobium etli altered in nodulation competitiveness and growth in the rhizosphere. Appl. Environ. Microbiol. 60:1430-1436.
-
(1994)
Appl. Environ. Microbiol.
, vol.60
, pp. 1430-1436
-
-
Araujo, R.S.1
Robleto, E.A.2
Handelsman, J.3
-
4
-
-
41049100518
-
A spectrophotometric method for measuring the breakdown of hydrogen peroxide by catalase
-
Beers, R. F., Jr., and I. W. Sizer. 1952. A spectrophotometric method for measuring the breakdown of hydrogen peroxide by catalase. J. Biol. Chem. 195:133-140.
-
(1952)
J. Biol. Chem.
, vol.195
, pp. 133-140
-
-
Beers Jr., R.F.1
Sizer, I.W.2
-
5
-
-
0028043692
-
Characterization and virulence analysis of catalase mutants of Haemophilus influenzae
-
Bishai, W. R., N. S. Howard, J. A. Winkelstein, and H. O. Smith. 1994. Characterization and virulence analysis of catalase mutants of Haemophilus influenzae. Infect. Immun. 62:4855-4860.
-
(1994)
Infect. Immun.
, vol.62
, pp. 4855-4860
-
-
Bishai, W.R.1
Howard, N.S.2
Winkelstein, J.A.3
Smith, H.O.4
-
6
-
-
0028272385
-
A peroxide/ascorbateinducible catalase from Haemophilus influenzae is homologous to the Escherichia coli katE gene product
-
Bishai, W. R., H. O. Smith, and G. J. Barcak. 1994. A peroxide/ascorbateinducible catalase from Haemophilus influenzae is homologous to the Escherichia coli katE gene product. J. Bacteriol. 176:2914-2921.
-
(1994)
J. Bacteriol.
, vol.176
, pp. 2914-2921
-
-
Bishai, W.R.1
Smith, H.O.2
Barcak, G.J.3
-
7
-
-
0025341353
-
Depressed light emission by symbiotic Vibrio fischeri of the sepiolid squid Euprymna scolopes
-
Boettcher, K. J., and E. G. Ruby. 1990. Depressed light emission by symbiotic Vibrio fischeri of the sepiolid squid Euprymna scolopes. J. Bacteriol. 172: 3701-3706.
-
(1990)
J. Bacteriol.
, vol.172
, pp. 3701-3706
-
-
Boettcher, K.J.1
Ruby, E.G.2
-
8
-
-
0025720743
-
The isolation, cloning and identification of a vegetative catalase gene from Bacillus subtilis
-
Bol, D. K., and R. E. Yasbin. 1991. The isolation, cloning and identification of a vegetative catalase gene from Bacillus subtilis. Gene 109:31-37.
-
(1991)
Gene
, vol.109
, pp. 31-37
-
-
Bol, D.K.1
Yasbin, R.E.2
-
9
-
-
0028910565
-
DNA repair is more important than catalase for Salmonella virulence in mice
-
Buchmeier, N. A., S. J. Libby, Y. Xu, P. C. Loewen, J. Switala, D. G. Guiney, and F. C. Fang. 1995. DNA repair is more important than catalase for Salmonella virulence in mice. J. Clin. Invest. 95:1047-1053.
-
(1995)
J. Clin. Invest.
, vol.95
, pp. 1047-1053
-
-
Buchmeier, N.A.1
Libby, S.J.2
Xu, Y.3
Loewen, P.C.4
Switala, J.5
Guiney, D.G.6
Fang, F.C.7
-
10
-
-
0028912344
-
Complete amino acid sequence of Proteus mirabilis PR catalase. Occurrence of a methionine sulfone in the close proximity of the active site
-
Buzy, A., V. Bracchi, R. Sterjiades, J. Chroboczek, P. Thibault, J. Gagnon, H. M. Jouve, and G. Hudry-Clergeon. 1995. Complete amino acid sequence of Proteus mirabilis PR catalase. Occurrence of a methionine sulfone in the close proximity of the active site. J. Protein Chem. 14:59-72.
-
(1995)
J. Protein Chem.
, vol.14
, pp. 59-72
-
-
Buzy, A.1
Bracchi, V.2
Sterjiades, R.3
Chroboczek, J.4
Thibault, P.5
Gagnon, J.6
Jouve, H.M.7
Hudry-Clergeon, G.8
-
11
-
-
0018956590
-
Analysis of gene control signals by DNA fusion and cloning in Escherichia coli
-
Casadaban, M, J., and S. N. Cohen. 1980. Analysis of gene control signals by DNA fusion and cloning in Escherichia coli. J. Mol. Biol. 138:179-207.
-
(1980)
J. Mol. Biol.
, vol.138
, pp. 179-207
-
-
Casadaban, M.J.1
Cohen, S.N.2
-
12
-
-
0003455675
-
-
Cold Spring Harbor Laboratory, Cold Spring Harbor, N.Y.
-
Davis, R. W., D. Botstein, and J. R. Roth. 1980. Advanced bacterial genetics. Cold Spring Harbor Laboratory, Cold Spring Harbor, N.Y.
-
(1980)
Advanced Bacterial Genetics
-
-
Davis, R.W.1
Botstein, D.2
Roth, J.R.3
-
13
-
-
0004228363
-
-
Oxford University Press, New York, N.Y.
-
Douglas, A. E. 1994. Symbiotic interactions. Oxford University Press, New York, N.Y.
-
(1994)
Symbiotic Interactions
-
-
Douglas, A.E.1
-
14
-
-
0029827844
-
Hypochlorous acid activates the heat shock and soxRS systems of Escherichia coli
-
Dukan, S., S. Dadon, D. R. Smulski, and S. Belkin. 1996. Hypochlorous acid activates the heat shock and soxRS systems of Escherichia coli. Appl. Environ. Microbiol. 62:4003-4008.
-
(1996)
Appl. Environ. Microbiol.
, vol.62
, pp. 4003-4008
-
-
Dukan, S.1
Dadon, S.2
Smulski, D.R.3
Belkin, S.4
-
15
-
-
0029858146
-
Hypochlorous acid stress in Escherichia coli: Resistance, DNA damage, and comparison with hydrogen peroxide stress
-
Dukan, S., and D. Touati. 1996. Hypochlorous acid stress in Escherichia coli: resistance, DNA damage, and comparison with hydrogen peroxide stress. J. Bacteriol. 178:6145-6150.
-
(1996)
J. Bacteriol.
, vol.178
, pp. 6145-6150
-
-
Dukan, S.1
Touati, D.2
-
16
-
-
0024616444
-
Regulation of luminescence by cyclic AMP in cya-like and crp-like mutants of Vibrio fischeri
-
Dunlap, P. V. 1989. Regulation of luminescence by cyclic AMP in cya-like and crp-like mutants of Vibrio fischeri. J. Bacteriol. 171:1199-1202.
-
(1989)
J. Bacteriol.
, vol.171
, pp. 1199-1202
-
-
Dunlap, P.V.1
-
18
-
-
0027399530
-
Identification of protein coding regions by database similarity search
-
Gish, W., and D. J. States. 1996. Identification of protein coding regions by database similarity search. Nat. Genet. 3:266-272.
-
(1996)
Nat. Genet.
, vol.3
, pp. 266-272
-
-
Gish, W.1
States, D.J.2
-
19
-
-
0029824861
-
An experimental test of the rhizopine concept in Rhizobium meliloti
-
Gordon, D. M., M. H. Ryder, K. Heinrich, and P. J. Murphy. 1996. An experimental test of the rhizopine concept in Rhizobium meliloti. Appl. Environ. Microbiol. 62:3991-3996.
-
(1996)
Appl. Environ. Microbiol.
, vol.62
, pp. 3991-3996
-
-
Gordon, D.M.1
Ryder, M.H.2
Heinrich, K.3
Murphy, P.J.4
-
20
-
-
0028054120
-
Effect of transposon-induced motility mutations on colonization of the host light organ by Vibrio fischeri
-
Graf, J., P. V. Dunlap, and E. G. Ruby. 1994. Effect of transposon-induced motility mutations on colonization of the host light organ by Vibrio fischeri. J. Bacteriol. 176:6986-6991.
-
(1994)
J. Bacteriol.
, vol.176
, pp. 6986-6991
-
-
Graf, J.1
Dunlap, P.V.2
Ruby, E.G.3
-
21
-
-
0021111879
-
Compilation and analysis of Escherichia coli promoter DNA sequences
-
Hawley, D. K., and W. R. McClure. 1983. Compilation and analysis of Escherichia coli promoter DNA sequences. Nucleic Acids Res. 11:2237-2255.
-
(1983)
Nucleic Acids Res.
, vol.11
, pp. 2237-2255
-
-
Hawley, D.K.1
McClure, W.R.2
-
22
-
-
0000073165
-
Regulation of gene expression during entry into stationary phase
-
F. C. Neidhardt, R. I. Curtiss, J. L. Ingraham, E. C. C. Lin, K. B. Low, B. Magasanik, W. S. Reznikoff, M. Riley, M. Schaechter, and H. E. Umbarger (ed.), ASM Press, Washington, D.C.
-
Hengee-Aronis, R. 1996. Regulation of gene expression during entry into stationary phase, p. 1497-1512. In F. C. Neidhardt, R. I. Curtiss, J. L. Ingraham, E. C. C. Lin, K. B. Low, B. Magasanik, W. S. Reznikoff, M. Riley, M. Schaechter, and H. E. Umbarger (ed.), Escherichia coli and Salmonella: cellular and molecular biology, 2nd ed. ASM Press, Washington, D.C.
-
(1996)
Escherichia Coli and Salmonella: Cellular and Molecular Biology, 2nd Ed.
, pp. 1497-1512
-
-
Hengee-Aronis, R.1
-
23
-
-
0030854046
-
Phylogenetic relationships among prokaryotic and eukaryotic catalases
-
Klotz, M. G., G. R. Klassen, and P. C. Loewen. 1997. Phylogenetic relationships among prokaryotic and eukaryotic catalases. Mol. Biol. Evol. 14:951-958.
-
(1997)
Mol. Biol. Evol.
, vol.14
, pp. 951-958
-
-
Klotz, M.G.1
Klassen, G.R.2
Loewen, P.C.3
-
24
-
-
0028328304
-
Competition between Vibrio fischen strains during initiation and maintenance of a light organ symbiosis
-
Lee, K.-H., and E. G. Ruby. 1994. Competition between Vibrio fischen strains during initiation and maintenance of a light organ symbiosis. J. Bacteriol. 176:1985-1991.
-
(1994)
J. Bacteriol.
, vol.176
, pp. 1985-1991
-
-
Lee, K.-H.1
Ruby, E.G.2
-
25
-
-
0028585707
-
Effect of the squid host on the abundance and distribution of symbiotic Vibrio fischeri in nature
-
Lee, K.-H., and E. G. Ruby. 1994. Effect of the squid host on the abundance and distribution of symbiotic Vibrio fischeri in nature. Appl. Environ. Microbiol. 60:1565-1571.
-
(1994)
Appl. Environ. Microbiol.
, vol.60
, pp. 1565-1571
-
-
Lee, K.-H.1
Ruby, E.G.2
-
26
-
-
0003119571
-
Bacterial catalases
-
J. G. Scandalios (ed.), Cold Spring Harbor Laboratory Press, Plainview, N.Y.
-
Loewen, P. C. 1997. Bacterial catalases, p. 273-308. In J. G. Scandalios (ed.), Oxidative stress and the molecular biology of antioxidant defenses. Cold Spring Harbor Laboratory Press, Plainview, N.Y.
-
(1997)
Oxidative Stress and the Molecular Biology of Antioxidant Defenses
, pp. 273-308
-
-
Loewen, P.C.1
-
27
-
-
0021867504
-
Genetic mapping of katG, a locus that affects synthesis of the bifunctional catalase-peroxidase hydroperoxidasc I in Escherichia coli
-
Loewen, P. C., B. L. Triggs, C. S. George, and B. E. Hrabauchuk. 1985. Genetic mapping of katG, a locus that affects synthesis of the bifunctional catalase-peroxidase hydroperoxidasc I in Escherichia coli. J. Bacteriol. 162; 661-667.
-
(1985)
J. Bacteriol.
, vol.162
, pp. 661-667
-
-
Loewen, P.C.1
Triggs, B.L.2
George, C.S.3
Hrabauchuk, B.E.4
-
28
-
-
71849104860
-
Protein measurement with the Folin phenol reagent
-
Lowry, O. H., N. J. Rosebrough, A. L. Farr, and R. J. Randall. 1951. Protein measurement with the Folin phenol reagent. J. Biol. Chem. 193:265-275.
-
(1951)
J. Biol. Chem.
, vol.193
, pp. 265-275
-
-
Lowry, O.H.1
Rosebrough, N.J.2
Farr, A.L.3
Randall, R.J.4
-
29
-
-
0028789409
-
Bacillus subtilis vegetative catalase is an extracellular enzyme
-
Naclerio, G., L. Baccigalupi, C. Caruso, M. De Felice, and E. Ricca. 1995. Bacillus subtilis vegetative catalase is an extracellular enzyme. Appl. Environ. Microbiol. 61:4471-4473.
-
(1995)
Appl. Environ. Microbiol.
, vol.61
, pp. 4471-4473
-
-
Naclerio, G.1
Baccigalupi, L.2
Caruso, C.3
De Felice, M.4
Ricca, E.5
-
30
-
-
77956986992
-
Isolation, identification, and manipulation of luminous bacteria
-
Nealson, K. H. 1978. Isolation, identification, and manipulation of luminous bacteria. Methods Enzymol. 57:153-166.
-
(1978)
Methods Enzymol.
, vol.57
, pp. 153-166
-
-
Nealson, K.H.1
-
32
-
-
0031046249
-
The light organ symbiont Vibrio fischeri possesses two distinct secreted ADP-ribosyltransferases
-
Reich, K. A., T. Biegel, and G. K. Schoolnik. 1997. The light organ symbiont Vibrio fischeri possesses two distinct secreted ADP-ribosyltransferases. J. Bacteriol. 179:1591-1597.
-
(1997)
J. Bacteriol.
, vol.179
, pp. 1591-1597
-
-
Reich, K.A.1
Biegel, T.2
Schoolnik, G.K.3
-
33
-
-
0030042456
-
Halovibrin, secreted from the light organ symbiont, Vibrio fischeri, is a member of a new class of ADP-ribosyltransferases
-
Reich, K. A., and G. K. Schoolnik. 1996. Halovibrin, secreted from the light organ symbiont, Vibrio fischeri, is a member of a new class of ADP-ribosyltransferases. J. Bacteriol. 178:209-215.
-
(1996)
J. Bacteriol.
, vol.178
, pp. 209-215
-
-
Reich, K.A.1
Schoolnik, G.K.2
-
34
-
-
0029019571
-
Biochemical and genetic analyses of a catalase from the anaerobic bacterium Bacteroides fragilis
-
Rocha, E. R., and C. J. Smith. 1995. Biochemical and genetic analyses of a catalase from the anaerobic bacterium Bacteroides fragilis. J. Bacteriol. 177: 3111-3119.
-
(1995)
J. Bacteriol.
, vol.177
, pp. 3111-3119
-
-
Rocha, E.R.1
Smith, C.J.2
-
35
-
-
0029837341
-
Lessons from a cooperative, bacterial-animal association: The Vibrio fischri-Euprymna scolopes light organ symbiosis
-
Ruby, E. G. 1996. Lessons from a cooperative, bacterial-animal association: the Vibrio fischri-Euprymna scolopes light organ symbiosis. Annu. Rev. Microbiol. 50:591-624.
-
(1996)
Annu. Rev. Microbiol.
, vol.50
, pp. 591-624
-
-
Ruby, E.G.1
-
36
-
-
0027526614
-
Growth and flagellation of Vibrio fischeri during initiation of the sepiolid squid light organ symbiosis
-
Ruby, E. G., and L. M. Asato. 1993. Growth and flagellation of Vibrio fischeri during initiation of the sepiolid squid light organ symbiosis. Arch. Microbiol. 159:160-167.
-
(1993)
Arch. Microbiol.
, vol.159
, pp. 160-167
-
-
Ruby, E.G.1
Asato, L.M.2
-
38
-
-
0016154301
-
The 3'-terminal sequence of Escherichia coli 16S ribosomal RNA: Complementarity to nonsense triplets and ribosome binding sites
-
Shine, J., and L. Dalgarno. 1974. The 3'-terminal sequence of Escherichia coli 16S ribosomal RNA: complementarity to nonsense triplets and ribosome binding sites. Proc. Natl. Acad. Sci. USA 71:1342-1346.
-
(1974)
Proc. Natl. Acad. Sci. USA
, vol.71
, pp. 1342-1346
-
-
Shine, J.1
Dalgarno, L.2
-
40
-
-
0024448362
-
Molecular cloning and nucleotide sequencing of oxyR, the positive regulatory gene of a regulon for an adaptive response to oxidative stress in Escherichia coli: Homologies between OxyR protein and a family of bacterial activator proteins
-
Tao, K., K. Makino, S. Yonei, A. Nakata, and H. Shinagawa. 1989. Molecular cloning and nucleotide sequencing of oxyR, the positive regulatory gene of a regulon for an adaptive response to oxidative stress in Escherichia coli: homologies between OxyR protein and a family of bacterial activator proteins. Mol. Gen. Genet. 218:371-376.
-
(1989)
Mol. Gen. Genet.
, vol.218
, pp. 371-376
-
-
Tao, K.1
Makino, K.2
Yonei, S.3
Nakata, A.4
Shinagawa, H.5
-
41
-
-
0024785396
-
Identification and molecular analysis of oxyR-regulated promoters important for the bacterial adaptation to oxidative stress
-
Tartaglia, L. A., G. Storz, and B. N. Ames. 1989. Identification and molecular analysis of oxyR-regulated promoters important for the bacterial adaptation to oxidative stress. J. Mol. Biol. 210:709-719.
-
(1989)
J. Mol. Biol.
, vol.210
, pp. 709-719
-
-
Tartaglia, L.A.1
Storz, G.2
Ames, B.N.3
-
42
-
-
0028023175
-
Redox-dependent shift of OxyR-DNA contacts along an extended DNA-binding site: A mechanism for differential promoter selection
-
Toledano, M. B., I. Kullik, F. Trinh, P. T. Baird, T. D. Schneider, and G. Storz. 1994. Redox-dependent shift of OxyR-DNA contacts along an extended DNA-binding site: A mechanism for differential promoter selection Cell 78:897-909.
-
(1994)
Cell
, vol.78
, pp. 897-909
-
-
Toledano, M.B.1
Kullik, I.2
Trinh, F.3
Baird, P.T.4
Schneider, T.D.5
Storz, G.6
-
43
-
-
0027504146
-
Abundant mRNAs in the squid light organ encode proteins with a high similarity to mammalian peroxidases
-
Tomarev, S. I., R. D. Zinovieva, V. M. Weis, A. B. Chepelinsky, J. Piatigorsky and M. J. McFall-Ngai. 1993. Abundant mRNAs in the squid light organ encode proteins with a high similarity to mammalian peroxidases. Gene 132 219-226.
-
(1993)
Gene
, vol.132
, pp. 219-226
-
-
Tomarev, S.I.1
Zinovieva, R.D.2
Weis, V.M.3
Chepelinsky, A.B.4
Piatigorsky, J.5
McFall-Ngai, M.J.6
-
44
-
-
0030840083
-
RpoS- and OxyR-independent induction of HPI catalase at stationary phase in Escherichia coli and identification of rpoS mutations in common laboratory strains
-
Visick, J. E., and S. Clarke. 1997. RpoS- and OxyR-independent induction of HPI catalase at stationary phase in Escherichia coli and identification of rpoS mutations in common laboratory strains. J. Bacteriol. 179:4158-4163.
-
(1997)
J. Bacteriol.
, vol.179
, pp. 4158-4163
-
-
Visick, J.E.1
Clarke, S.2
-
45
-
-
0030579150
-
Construction and symbiotic competence of a luxA-deletion mutant of Vibrio fischeri
-
Visick, K. L., and E. G. Ruby. 1996. Construction and symbiotic competence of a luxA-deletion mutant of Vibrio fischeri. Gene 175:89-94.
-
(1996)
Gene
, vol.175
, pp. 89-94
-
-
Visick, K.L.1
Ruby, E.G.2
-
46
-
-
0026074553
-
Nucleotide sequence of Escherichia coli katE, which encodes catalase HPII
-
von Ossowski, I., M. R. Mulvey, P. A. Leco, A. Borys, and P. C. Loewen. 1991. Nucleotide sequence of Escherichia coli katE, which encodes catalase HPII. J. Bacteriol. 173:514-520.
-
(1991)
J. Bacteriol.
, vol.173
, pp. 514-520
-
-
Von Ossowski, I.1
Mulvey, M.R.2
Leco, P.A.3
Borys, A.4
Loewen, P.C.5
-
47
-
-
0024789746
-
Development of symbiotic bacterial bioluminescence in a nearshore cephalopod, Euprymna scolopes
-
Wei, S. L., and R. E. Young. 1989. Development of symbiotic bacterial bioluminescence in a nearshore cephalopod, Euprymna scolopes. Mar. Biol. 103: 541-546.
-
(1989)
Mar. Biol.
, vol.103
, pp. 541-546
-
-
Wei, S.L.1
Young, R.E.2
-
48
-
-
0030475227
-
A peroxidase relate to the mammalian antimicrobial protein myeloperoxidase in the EuprymnaVibrio mutualism
-
Weis, V. M., A. L. Small, and M. J. McFall-Ngai. 1996. A peroxidase relate to the mammalian antimicrobial protein myeloperoxidase in the EuprymnaVibrio mutualism. Proc. Natl. Acad. Sci. USA 93:13683-13688.
-
(1996)
Proc. Natl. Acad. Sci. USA
, vol.93
, pp. 13683-13688
-
-
Weis, V.M.1
Small, A.L.2
McFall-Ngai, M.J.3
-
50
-
-
0021943518
-
Improved M13 phage cloning vectors and host strains: Nucleotide sequences of the M13mp18 and pUC19 cloning vectors
-
Yanisch-Perron, C., J. Vieira, and J. Messing. 1985. Improved M13 phage cloning vectors and host strains: nucleotide sequences of the M13mp18 and pUC19 cloning vectors. Gene 33:103-119.
-
(1985)
Gene
, vol.33
, pp. 103-119
-
-
Yanisch-Perron, C.1
Vieira, J.2
Messing, J.3
|