메뉴 건너뛰기




Volumn 14, Issue 9, 1997, Pages 951-958

Phylogenetic relationships among prokaryotic and eukaryotic catalases

Author keywords

Catalase; Horizontal gene transfer; Parallel evolution; Phylogeny

Indexed keywords

BACTERIAL ENZYME; CATALASE; FUNGAL ENZYME; PLANT ENZYME; UNCLASSIFIED DRUG;

EID: 0030854046     PISSN: 07374038     EISSN: None     Source Type: Journal    
DOI: 10.1093/oxfordjournals.molbev.a025838     Document Type: Article
Times cited : (162)

References (36)
  • 1
    • 0023007996 scopus 로고
    • Characterization of a manganese-containing catalase from the obligate thermophile Thermoleophilum album
    • ALLGOOD, G. S., and J. J. PERRY. 1986. Characterization of a manganese-containing catalase from the obligate thermophile Thermoleophilum album. J. Bacteriol. 168:563-567.
    • (1986) J. Bacteriol. , vol.168 , pp. 563-567
    • Allgood, G.S.1    Perry, J.J.2
  • 2
    • 0022645071 scopus 로고
    • Superoxide dismutase and oxygen toxicity defenses in the genus Neisseria
    • ARCHIBALD, F. S., and M.-N. DUONG. 1986. Superoxide dismutase and oxygen toxicity defenses in the genus Neisseria. Infect. Immun. 51:631-641.
    • (1986) Infect. Immun. , vol.51 , pp. 631-641
    • Archibald, F.S.1    Duong, M.-N.2
  • 3
    • 0018367454 scopus 로고
    • Purification of the o-dianisidine peroxidase from Escherichia coli B. Physicochemical characterization and analysis of its dual catalatic and peroxidatic activities
    • CLAIBORNE, A., and I. FRIDOVICH. 1979. Purification of the o-dianisidine peroxidase from Escherichia coli B. Physicochemical characterization and analysis of its dual catalatic and peroxidatic activities. J. Biol. Chem. 254:4245-4252.
    • (1979) J. Biol. Chem. , vol.254 , pp. 4245-4252
    • Claiborne, A.1    Fridovich, I.2
  • 4
    • 0018639058 scopus 로고
    • Purification and characterization of hydroperoxidase II of Escherichia coli
    • CLAIBORNE, A., D. P. MALINOWSKI, and I. FRIDOVICH. 1979. Purification and characterization of hydroperoxidase II of Escherichia coli. J. Biol. Chem. 254:11664-11668.
    • (1979) J. Biol. Chem. , vol.254 , pp. 11664-11668
    • Claiborne, A.1    Malinowski, D.P.2    Fridovich, I.3
  • 5
    • 0345395070 scopus 로고
    • Purified catalase from Rhodopseudo- Monas spheroides
    • CLAYTON, R. K. 1959. Purified catalase from Rhodopseudo- monas spheroides. Biochim. Biophys. Acta 36:40-47.
    • (1959) Biochim. Biophys. Acta , vol.36 , pp. 40-47
    • Clayton, R.K.1
  • 6
    • 0029061243 scopus 로고
    • Evidence for cell density-dependent regulation of catalase activity in Rhizobium leguminosarum bv. phaseoli
    • CROCKFORD, A. J., G. A. DAVIS, and H. D. WILLIAMS. 1995. Evidence for cell density-dependent regulation of catalase activity in Rhizobium leguminosarum bv. phaseoli. Microbiology 141:843-851.
    • (1995) Microbiology , vol.141 , pp. 843-851
    • Crockford, A.J.1    Davis, G.A.2    Williams, H.D.3
  • 7
    • 0028089759 scopus 로고
    • Molecular characterization of catalase from Bordetella pertusis: Identification of the katA promoter in an upstream insertion sequence
    • DESHAZER, D., G. E. WOOD, and R. L. FRIEDMAN. 1994. Molecular characterization of catalase from Bordetella pertusis: identification of the katA promoter in an upstream insertion sequence. Molec. Microbiol. 14:123-130.
    • (1994) Molec. Microbiol. , vol.14 , pp. 123-130
    • Deshazer, D.1    Wood, G.E.2    Friedman, R.L.3
  • 8
    • 0029610851 scopus 로고
    • The RecA protein as a model molecule for molecular systematic studies of bacteria: Comparison of trees of RecAs and 16S rRNAs from the same species
    • EISEN, J. A. 1995. The RecA protein as a model molecule for molecular systematic studies of bacteria: comparison of trees of RecAs and 16S rRNAs from the same species. J. Mol. Evol. 41:1105-1123.
    • (1995) J. Mol. Evol. , vol.41 , pp. 1105-1123
    • Eisen, J.A.1
  • 10
    • 0029653518 scopus 로고
    • Whole-genome random sequencing and assembly of Haemophilus influenzae Rd
    • 37 co-authors
    • FLEISCHMANN, R. D., M. D. ADAMS, O. WHITE et al. (37 co-authors). 1995. Whole-genome random sequencing and assembly of Haemophilus influenzae Rd. Science 269:496-512.
    • (1995) Science , vol.269 , pp. 496-512
    • Fleischmann, R.D.1    Adams, M.D.2    White, O.3
  • 11
    • 0024373336 scopus 로고
    • Purification and characterization of a novel type of catalase from the bacterium Klebsiella pneumoniae
    • GOLDBERG, I., and A. HOCHMAN. 1989. Purification and characterization of a novel type of catalase from the bacterium Klebsiella pneumoniae. Biochim. Biophys. Acta 991:330-336.
    • (1989) Biochim. Biophys. Acta , vol.991 , pp. 330-336
    • Goldberg, I.1    Hochman, A.2
  • 12
    • 0029045134 scopus 로고
    • Molecular characterization of katA from Campylobacter jejuni and generation of a catalase-deficient mutant of Campylobacter coli by inter-specific allelic exchange
    • GRANT, K. A., and S. F. PARK. 1995. Molecular characterization of katA from Campylobacter jejuni and generation of a catalase-deficient mutant of Campylobacter coli by inter-specific allelic exchange. Microbiology 141:1369-1376.
    • (1995) Microbiology , vol.141 , pp. 1369-1376
    • Grant, K.A.1    Park, S.F.2
  • 13
    • 0029992263 scopus 로고    scopus 로고
    • Molecular evolution of maize catalases and their relationship to other eukaryotic and prokaryotic catalases
    • GUAN, L., and J. G. SCANDALIOS. 1996. Molecular evolution of maize catalases and their relationship to other eukaryotic and prokaryotic catalases. J. Mol. Evol. 42:570-579.
    • (1996) J. Mol. Evol. , vol.42 , pp. 570-579
    • Guan, L.1    Scandalios, J.G.2
  • 14
    • 84872118244 scopus 로고
    • Crystalline bacterial catalase
    • HERBERT, D., and J. PINSENT. 1948. Crystalline bacterial catalase. Biochem. J. 43:193-202.
    • (1948) Biochem. J. , vol.43 , pp. 193-202
    • Herbert, D.1    Pinsent, J.2
  • 15
    • 0029830431 scopus 로고    scopus 로고
    • Cloning and characterization of the katA gene of Rhizobium meliloti encoding a hydrogen peroxide-inducible catalase
    • HEROUART, D., S. SIGAUD, S. MOREAU, P. FRENDO, D. TOUATI, and A. PUPPO. 1996. Cloning and characterization of the katA gene of Rhizobium meliloti encoding a hydrogen peroxide-inducible catalase. J. Bacteriol. 178:6802-6809.
    • (1996) J. Bacteriol. , vol.178 , pp. 6802-6809
    • Herouart, D.1    Sigaud, S.2    Moreau, S.3    Frendo, P.4    Touati, D.5    Puppo, A.6
  • 16
    • 0029003302 scopus 로고
    • Purification of three catalase isozymes from facultatively alkaliphilic Bacillus firmus OF4
    • HICKS, D. B. 1995. Purification of three catalase isozymes from facultatively alkaliphilic Bacillus firmus OF4. Biochim. Biophys. Acta 1229:347-355.
    • (1995) Biochim. Biophys. Acta , vol.1229 , pp. 347-355
    • Hicks, D.B.1
  • 17
    • 0029958917 scopus 로고    scopus 로고
    • Cloning and analysis of sodC, encoding the copper-zinc Superoxide dismutase of Escherichia coli
    • IMLAY, K. R. C., and J. A. IMLAY. 1996. Cloning and analysis of sodC, encoding the copper-zinc Superoxide dismutase of Escherichia coli. J. Bacteriol. 178:2564-2571.
    • (1996) J. Bacteriol. , vol.178 , pp. 2564-2571
    • Imlay, K.R.C.1    Imlay, J.A.2
  • 18
    • 0020625142 scopus 로고
    • Purification and properties of the Proteus mirabilis catalase
    • JOUVE, H. M., S. TESSIER, and J. PELMONT. 1983. Purification and properties of the Proteus mirabilis catalase. Can. J. Biochem. Cell Biol. 61:8-14.
    • (1983) Can. J. Biochem. Cell Biol. , vol.61 , pp. 8-14
    • Jouve, H.M.1    Tessier, S.2    Pelmont, J.3
  • 19
    • 0028588511 scopus 로고
    • Characterization of the major catalase from Streptomyces coelicolor ATCC10147
    • KIM, H., J.-S. LEE, Y. C. HAH, and J.-H. ROE. 1994. Characterization of the major catalase from Streptomyces coelicolor ATCC10147. Microbiology 140:3391-3397.
    • (1994) Microbiology , vol.140 , pp. 3391-3397
    • Kim, H.1    Lee, J.-S.2    Hah, Y.C.3    Roe, J.-H.4
  • 20
    • 0026562804 scopus 로고
    • Cloning, sequence, and phenotypic expression of katA, which encodes the catalase of Lactobacillus sake LTH677
    • KNAUF, H. J., R. F. VOGEL, and W. P. HAMMES. 1992. Cloning, sequence, and phenotypic expression of katA, which encodes the catalase of Lactobacillus sake LTH677. Appl. Environ. Microbiol. 68:832-839.
    • (1992) Appl. Environ. Microbiol. , vol.68 , pp. 832-839
    • Knauf, H.J.1    Vogel, R.F.2    Hammes, W.P.3
  • 21
    • 0021111935 scopus 로고
    • Isolation and characterization of the pseudocatalase of Lactobacillus plantarum. A new manganese containing enzyme
    • KONO, Y., and I. FRIDOVICH. 1983. Isolation and characterization of the pseudocatalase of Lactobacillus plantarum. A new manganese containing enzyme. J. Biol. Chem. 258:6015-6019.
    • (1983) J. Biol. Chem. , vol.258 , pp. 6015-6019
    • Kono, Y.1    Fridovich, I.2
  • 22
    • 0027359258 scopus 로고
    • Evolution of the recA gene and the molecular phylogeny of bacteria
    • LLOYD, A. T., and P. M. SHARP. 1993. Evolution of the recA gene and the molecular phylogeny of bacteria. J. Mol. Evol. 37:399-407.
    • (1993) J. Mol. Evol. , vol.37 , pp. 399-407
    • Lloyd, A.T.1    Sharp, P.M.2
  • 23
    • 0022530846 scopus 로고
    • Purification and characterization of catalase HPII from Escherichia coli K12
    • LOEWEN, P. C., and J. SWITALA. 1986. Purification and characterization of catalase HPII from Escherichia coli K12. Biochem. Cell Biol. 64:638-646.
    • (1986) Biochem. Cell Biol. , vol.64 , pp. 638-646
    • Loewen, P.C.1    Switala, J.2
  • 24
    • 0022366614 scopus 로고
    • Catalases HPI arid HPII in Escherichia coli are induced independently
    • LOEWEN, P. C., J. SWITALA, and B. L. TRIGGS-RAIME. 1985. Catalases HPI arid HPII in Escherichia coli are induced independently. Arch. Biochem. Biophys. 243:144-149.
    • (1985) Arch. Biochem. Biophys. , vol.243 , pp. 144-149
    • Loewen, P.C.1    Switala, J.2    Triggs-Raime, B.L.3
  • 25
    • 0029946166 scopus 로고    scopus 로고
    • Anomalous phylogenies based on bacterial catalase gene sequences
    • MAYFIELD, J. E., and M. R. DUVALL. 1996. Anomalous phylogenies based on bacterial catalase gene sequences. J. Mol.
    • (1996) J. Mol.
    • Mayfield, J.E.1    Duvall, M.R.2
  • 26
    • 0013596021 scopus 로고
    • The guanine and cytosine content of genomic DNA and bacterial evolution
    • MUTO, A., and S. OZAWA. 1987. The guanine and cytosine content of genomic DNA and bacterial evolution. Proc. Natl. Acad. Sci. USA 84:166-169.
    • (1987) Proc. Natl. Acad. Sci. USA , vol.84 , pp. 166-169
    • Muto, A.1    Ozawa, S.2
  • 27
    • 0029809179 scopus 로고    scopus 로고
    • Clpning and genetic characterization of Helicobacter pylori catalase and construction of a catalase-deficient mutant strain
    • ODENBREIT, S., B. WIELAND, and R. HAAS. 1996. Clpning and genetic characterization of Helicobacter pylori catalase and construction of a catalase-deficient mutant strain. J. Bacteriol. 178:6960-6967.
    • (1996) J. Bacteriol. , vol.178 , pp. 6960-6967
    • Odenbreit, S.1    Wieland, B.2    Haas, R.3
  • 28
    • 0028055018 scopus 로고
    • The winds of (evolutionary) change: Breathing new life into microbiology
    • OLSEN, G. J., C. R. WOESE, and R. OVERBEEK. 1994, The winds of (evolutionary) change: breathing new life into microbiology. J. Bacteriol. 176:1-6.
    • (1994) J. Bacteriol. , vol.176 , pp. 1-6
    • Olsen, G.J.1    Woese, C.R.2    Overbeek, R.3
  • 29
    • 0029019571 scopus 로고
    • Biochemical and genetic analyses of a catalase from the anaerobic bacterium Bacteroides fragilis
    • ROCHA, E. R., and C. J. SMITH. 1995. Biochemical and genetic analyses of a catalase from the anaerobic bacterium Bacteroides fragilis. J. Bacteriol. 177:3111-3119.
    • (1995) J. Bacteriol. , vol.177 , pp. 3111-3119
    • Rocha, E.R.1    Smith, C.J.2
  • 30
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • SAITOU, N., and M. NEI. 1987. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4:406-425.
    • (1987) Mol. Biol. Evol. , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 31
    • 0028138839 scopus 로고
    • Brucella abortus catalase is a periplasmic protein lacking a standard signal sequence
    • SHA, Z., T. J. STABEL, and J. E. MAYFIELD. 1994. Brucella abortus catalase is a periplasmic protein lacking a standard signal sequence. J. Bacteriol. 176:7375-7377.
    • (1994) J. Bacteriol. , vol.176 , pp. 7375-7377
    • Sha, Z.1    Stabel, T.J.2    Mayfield, J.E.3
  • 32
    • 0024116811 scopus 로고
    • "Silent" sites in Drosophila genes are not neutral: Evidence of selection among synonymous codons
    • SHIELD, D. C., P. M. SHARP, D. G. HIGGINS, and F. WRIGHT. 1988. "Silent" sites in Drosophila genes are not neutral: evidence of selection among synonymous codons. Mol. Biol. Evol. 5:704-716.
    • (1988) Mol. Biol. Evol. , vol.5 , pp. 704-716
    • Shield, D.C.1    Sharp, P.M.2    Higgins, D.G.3    Wright, F.4
  • 33
    • 0027333416 scopus 로고
    • Protein import into peroxisomes and the biogenesis of the organelle
    • SUBRAMANI, S. 1993. Protein import into peroxisomes and the biogenesis of the organelle. Annu. Rev. Cell Biol. 9:445-478.
    • (1993) Annu. Rev. Cell Biol. , vol.9 , pp. 445-478
    • Subramani, S.1
  • 34
    • 0027968068 scopus 로고
    • ClustalW: Improving the sensitivity of progressive multiple sequence alignments through sequence weighting, positions-specific gap penalties and weight matrix choice
    • THOMPSON, J. D., D. G. HIGGINS, and T. J. GIBSON. 1994. ClustalW: improving the sensitivity of progressive multiple sequence alignments through sequence weighting, positions-specific gap penalties and weight matrix choice. Nucleic Acids Res. 22:4673-4680.
    • (1994) Nucleic Acids Res. , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 35
    • 0027167719 scopus 로고
    • Molecular evolutionary analysis based on the amino acid sequence of catalase
    • VON OSSOWSKI, I., G. HAUSNER, and P. C. LOEWEN. 1993. Molecular evolutionary analysis based on the amino acid sequence of catalase. J. Mol. Evol. 37:71-76.
    • (1993) J. Mol. Evol. , vol.37 , pp. 71-76
    • Von Ossowski, I.1    Hausner, G.2    Loewen, P.C.3
  • 36
    • 0028123803 scopus 로고
    • Mutations affecting hyphal colonization and pyoverdine production in pseudomonads antagonistic toward Phytophthora parasitica
    • YANG, C.-H., J. A. MENGE, and D. A. COOKSEY. 1994. Mutations affecting hyphal colonization and pyoverdine production in pseudomonads antagonistic toward Phytophthora parasitica. Appl. Environ. Microbiol. 60:473-481.
    • (1994) Appl. Environ. Microbiol. , vol.60 , pp. 473-481
    • Yang, C.-H.1    Menge, J.A.2    Cooksey, D.A.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.