메뉴 건너뛰기




Volumn 18, Issue 9, 1998, Pages 5425-5434

A role for SRp54 during intron bridging of small introns with pyrimidine tracts upstream of the branch point

Author keywords

[No Author keywords available]

Indexed keywords

ANIMAL CELL; ARTICLE; CONTROLLED STUDY; DROSOPHILA MELANOGASTER; EXON; INTRON; MOLECULAR RECOGNITION; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; PROTEIN PROCESSING; RNA SPLICING; RNA STRUCTURE; RNA TRANSLATION; SPLICEOSOME;

EID: 0031842450     PISSN: 02707306     EISSN: None     Source Type: Journal    
DOI: 10.1128/MCB.18.9.5425     Document Type: Article
Times cited : (29)

References (39)
  • 1
    • 0028273768 scopus 로고
    • The yeast MUD2 protein: An interaction with PRP11 defines a bridge between commitment complexes and U2 snRNP addition
    • Abovich, N., X. C. Liao, and M. Rosbush. 1994. The yeast MUD2 protein: an interaction with PRP11 defines a bridge between commitment complexes and U2 snRNP addition. Genes Dev. 8:843-854.
    • (1994) Genes Dev. , vol.8 , pp. 843-854
    • Abovich, N.1    Liao, X.C.2    Rosbush, M.3
  • 2
    • 0030911051 scopus 로고    scopus 로고
    • Cross-intron bridging interactions in the yeast commitment complex are conserved in mammals
    • Abovich, N., and M. Rosbash. 1997. Cross-intron bridging interactions in the yeast commitment complex are conserved in mammals. Cell 89:403-412.
    • (1997) Cell , vol.89 , pp. 403-412
    • Abovich, N.1    Rosbash, M.2
  • 4
    • 0029890441 scopus 로고    scopus 로고
    • Biochemistry and regulation of pre-mRNA splicing
    • Adams, M. D., D. Z. Rudner, and D. C. Rio. 1996. Biochemistry and regulation of pre-mRNA splicing. Curr. Opin. Cell Biol. 8:331-339.
    • (1996) Curr. Opin. Cell Biol. , vol.8 , pp. 331-339
    • Adams, M.D.1    Rudner, D.Z.2    Rio, D.C.3
  • 5
    • 0029949698 scopus 로고    scopus 로고
    • Mammalian splicing factor SF1 is encoded by variant cDNAs and binds to RNA
    • Arning, S., P. Gruter, G. Bilbe, and A. Krämer. 1996, Mammalian splicing factor SF1 is encoded by variant cDNAs and binds to RNA. RNA 2:794-810.
    • (1996) RNA , vol.2 , pp. 794-810
    • Arning, S.1    Gruter, P.2    Bilbe, G.3    Krämer, A.4
  • 6
    • 0028895417 scopus 로고
    • Exon recognition in vertebrate splicing
    • Berget, S. M. 1995. Exon recognition in vertebrate splicing. J. Biol. Chem. 2: 2411-2414.
    • (1995) J. Biol. Chem. , vol.2 , pp. 2411-2414
    • Berget, S.M.1
  • 7
    • 0030696675 scopus 로고    scopus 로고
    • The Splicing factor BBP interacts specifically with the pre-mRNA branchpoint sequence UACUAAC
    • Berglund, J. A., K. Chua, N. Abovich, R. Reed, and M. Rosbash. 1997. The Splicing factor BBP interacts specifically with the pre-mRNA branchpoint sequence UACUAAC. Cell 89:781-787.
    • (1997) Cell , vol.89 , pp. 781-787
    • Berglund, J.A.1    Chua, K.2    Abovich, N.3    Reed, R.4    Rosbash, M.5
  • 8
    • 0032521186 scopus 로고    scopus 로고
    • A cooperative interaction between U2AF65 and mBBP/SF1 facilitates branchpoint region recognition
    • Berglund, J. A., N. Abovich, and M. Rosbash. 1998. A cooperative interaction between U2AF65 and mBBP/SF1 facilitates branchpoint region recognition. Genes Dev. 12:858-867.
    • (1998) Genes Dev. , vol.12 , pp. 858-867
    • Berglund, J.A.1    Abovich, N.2    Rosbash, M.3
  • 9
    • 0029382603 scopus 로고
    • Finding splice sites in a wilderness of RNA
    • Black, D. L. 1995. Finding splice sites in a wilderness of RNA. RNA 1:763-771.
    • (1995) RNA , vol.1 , pp. 763-771
    • Black, D.L.1
  • 10
    • 0029118221 scopus 로고
    • Accumulation of a novel spliceosomeal complex on pre-mRNAs containing branch site mutations
    • Champion-Arnaud, P., O. Gozani, L. Palandijian, and R. Reed. 1995. Accumulation of a novel spliceosomeal complex on pre-mRNAs containing branch site mutations. Mol. Cell. Biol. 15:5750-5756.
    • (1995) Mol. Cell. Biol. , vol.15 , pp. 5750-5756
    • Champion-Arnaud, P.1    Gozani, O.2    Palandijian, L.3    Reed, R.4
  • 11
    • 0030891302 scopus 로고    scopus 로고
    • RNA splicing specificity determined by the coordinated action of RNA recognition motifs in SR proteins
    • Chandler, S. D., A. Mayeda, J. M. Yeakley, A. R. Krainer, and X. D. Fu. 1997. RNA splicing specificity determined by the coordinated action of RNA recognition motifs in SR proteins. Proc. Natl. Acad. Sci. USA 94:3596-3601.
    • (1997) Proc. Natl. Acad. Sci. USA , vol.94 , pp. 3596-3601
    • Chandler, S.D.1    Mayeda, A.2    Yeakley, J.M.3    Krainer, A.R.4    Fu, X.D.5
  • 12
    • 0025777258 scopus 로고
    • Primary structure of a human arginine-rich nuclear protein that colocalizes with spliceosome components
    • Chaudhary, N., C. McMahon, and G. Blobel. 1991. Primary structure of a human arginine-rich nuclear protein that colocalizes with spliceosome components. Proc. Natl. Acad. Sci. USA 88:8189-8193.
    • (1991) Proc. Natl. Acad. Sci. USA , vol.88 , pp. 8189-8193
    • Chaudhary, N.1    McMahon, C.2    Blobel, G.3
  • 13
    • 0029372979 scopus 로고
    • The superfamily of arginine/serine rich splicing factors
    • Fu, X.-D. 1995. The superfamily of arginine/serine rich splicing factors. RNA 1:663-680.
    • (1995) RNA , vol.1 , pp. 663-680
    • Fu, X.-D.1
  • 14
    • 0027500141 scopus 로고
    • Species-specific signals for the splicing of a short Drosophila intron in vitro
    • Guo, M., P. C. H. Lo, and S. M. Mount. 1993. Species-specific signals for the splicing of a short Drosophila intron in vitro. Mol. Cell. Biol. 13:1104-1118.
    • (1993) Mol. Cell. Biol. , vol.13 , pp. 1104-1118
    • Guo, M.1    Lo, P.C.H.2    Mount, S.M.3
  • 15
    • 0026423013 scopus 로고
    • Messenger RNA splicing in yeast: Clues to why the spliceosome is a ribonucleoprotein
    • Guthrie, C. 1991. Messenger RNA splicing in yeast: clues to why the spliceosome is a ribonucleoprotein. Science 253:157-163.
    • (1991) Science , vol.253 , pp. 157-163
    • Guthrie, C.1
  • 16
    • 0023685544 scopus 로고
    • A survey on intron and exon lengths
    • Hawkins, J. D. 1988. A survey on intron and exon lengths. Nucleic Acids Res. 16:9893-9908.
    • (1988) Nucleic Acids Res. , vol.16 , pp. 9893-9908
    • Hawkins, J.D.1
  • 17
    • 0027445241 scopus 로고
    • The conserved pre-mRNA splicing factor U2AF from Drosophila: Requirement for viability
    • Kanaar, R., S. E. Roche, E. L. Beall, M. R. Green, and D. C. Rio. 1993. The conserved pre-mRNA splicing factor U2AF from Drosophila: requirement for viability. Science 262:569-572.
    • (1993) Science , vol.262 , pp. 569-572
    • Kanaar, R.1    Roche, S.E.2    Beall, E.L.3    Green, M.R.4    Rio, D.C.5
  • 18
    • 0030899120 scopus 로고    scopus 로고
    • Pyrimidine tracts between the 5′ splice site and branch point facilitate splicing and recognition of a small Drosophila intron
    • Kennedy, C. F., and S. M. Berget. 1997. Pyrimidine tracts between the 5′ splice site and branch point facilitate splicing and recognition of a small Drosophila intron. Mol. Cell. Biol. 17:2774-2780.
    • (1997) Mol. Cell. Biol. , vol.17 , pp. 2774-2780
    • Kennedy, C.F.1    Berget, S.M.2
  • 19
    • 0026668641 scopus 로고
    • Purification of splicing factor SF1, a heat-stable protein that functions in the assembly of a presplicing complex
    • Krämer, A. 1992. Purification of splicing factor SF1, a heat-stable protein that functions in the assembly of a presplicing complex. Mol. Cell. Biol 12: 4545-1552.
    • (1992) Mol. Cell. Biol , vol.12 , pp. 4545-11552
    • Krämer, A.1
  • 20
    • 0029891101 scopus 로고    scopus 로고
    • The structure and function of proteins involved in mammalian pre-mRNA splicing
    • Krämer, A. 1996, The structure and function of proteins involved in mammalian pre-mRNA splicing. Annu. Rev. Biochem. 65:367-409.
    • (1996) Annu. Rev. Biochem. , vol.65 , pp. 367-409
    • Krämer, A.1
  • 21
    • 0028965970 scopus 로고
    • An RBD that does not bind RNA: NMR secondary structure determination and biochemical properties of the C-terminal RNA binding domain from the human U1A protein
    • Lu, J., and K. B. Hall. 1995. An RBD that does not bind RNA: NMR secondary structure determination and biochemical properties of the C-terminal RNA binding domain from the human U1A protein. J. Mol. Biol 247:739-752.
    • (1995) J. Mol. Biol , vol.247 , pp. 739-752
    • Lu, J.1    Hall, K.B.2
  • 22
    • 0029767662 scopus 로고    scopus 로고
    • SR proteins and splicing control
    • Manley, J. L., and R. Tacke. 1996. SR proteins and splicing control. Genes Dev. 10:16569-1579.
    • (1996) Genes Dev. , vol.10 , pp. 16569-21579
    • Manley, J.L.1    Tacke, R.2
  • 24
    • 0026657738 scopus 로고
    • Splicing signals in Drosophila: Intron size, information content, and consensus sequences
    • Mount, S. M., C. Burks, G. Hertz, G. D. Stormo, O. White, and C. Fields. 1992. Splicing signals in Drosophila: intron size, information content, and consensus sequences. Nucleic Acids Res. 20:4255-4262.
    • (1992) Nucleic Acids Res. , vol.20 , pp. 4255-4262
    • Mount, S.M.1    Burks, C.2    Hertz, G.3    Stormo, G.D.4    White, O.5    Fields, C.6
  • 25
    • 0041372953 scopus 로고    scopus 로고
    • Multiple RRMs contribute to RNA binding specificity and affinity for polypyrimidine tract binding protein
    • Ferez, I., J. G. McAfee, and J. G. Palton. 1997. Multiple RRMs contribute to RNA binding specificity and affinity for polypyrimidine tract binding protein. Biochemistry 36:11881-11890.
    • (1997) Biochemistry , vol.36 , pp. 11881-11890
    • Ferez, I.1    McAfee, J.G.2    Palton, J.G.3
  • 26
    • 0029933504 scopus 로고    scopus 로고
    • Initial splice site recognition and pairing during pre-mRNA splicing
    • Reed, R. 1996. Initial splice site recognition and pairing during pre-mRNA splicing. Curr. Opin. Genet. Dev. 6:215-220.
    • (1996) Curr. Opin. Genet. Dev. , vol.6 , pp. 215-220
    • Reed, R.1
  • 27
    • 0027296213 scopus 로고
    • Splicing of pre-mRNA: Mechanism, regulation and role in development
    • Rio, D. C. 1993. Splicing of pre-mRNA: mechanism, regulation and role in development. Curr. Opin. Genet. Dev. 3:574-584.
    • (1993) Curr. Opin. Genet. Dev. , vol.3 , pp. 574-584
    • Rio, D.C.1
  • 28
    • 0025098474 scopus 로고
    • Exon definition may facilitate splice site selection in RNAs with multiple exons
    • Robberson, B. L., G. J. Cote, and S. M. Berget. 1990. Exon definition may facilitate splice site selection in RNAs with multiple exons. Mol. Cell. Biol. 10:84-94.
    • (1990) Mol. Cell. Biol. , vol.10 , pp. 84-94
    • Robberson, B.L.1    Cote, G.J.2    Berget, S.M.3
  • 29
    • 0029055472 scopus 로고
    • Distinct binding specificities and functions of higher eukaryotic polypyrimidine-tract binding proteins
    • Singh, R., J. Valcárcel, and M. R. Green. 1995. Distinct binding specificities and functions of higher eukaryotic polypyrimidine-tract binding proteins. Science 268:1173-1176.
    • (1995) Science , vol.268 , pp. 1173-1176
    • Singh, R.1    Valcárcel, J.2    Green, M.R.3
  • 30
    • 0028288693 scopus 로고
    • Intron definition in splicing of small Drosophila introns
    • Talerico, M., and S. M. Berget. 1994. Intron definition in splicing of small Drosophila introns. Mol. Cell. Biol. 14:3434-3445.
    • (1994) Mol. Cell. Biol. , vol.14 , pp. 3434-3445
    • Talerico, M.1    Berget, S.M.2
  • 31
    • 0030595187 scopus 로고    scopus 로고
    • 65 RS region with pre-mRNA branch point and promotion of base pairing with U2 snRNA
    • 65 RS region with pre-mRNA branch point and promotion of base pairing with U2 snRNA. Science 273:1706-1709.
    • (1996) Science , vol.273 , pp. 1706-1709
    • Valcárcel, J.1    Gaur, R.K.2    Singh, R.3    Green, M.R.4
  • 32
    • 0030218143 scopus 로고    scopus 로고
    • The SR protein family: Pleiotropic functions in pre-mRNA splicing
    • Valcárcel, J., and M. R. Green. 1996. The SR protein family: pleiotropic functions in pre-mRNA splicing. Trends Biochem. Sci. 21:296-301.
    • (1996) Trends Biochem. Sci. , vol.21 , pp. 296-301
    • Valcárcel, J.1    Green, M.R.2
  • 33
    • 0029258817 scopus 로고
    • Intrinsic U2AF binding is modulated by exon enhancer signals in parallel with changes in splicing activity
    • Wang, Z., H. M. Hoffman, and P. J. Grabowski. 1995. Intrinsic U2AF binding is modulated by exon enhancer signals in parallel with changes in splicing activity. RNA 1:21-35.
    • (1995) RNA , vol.1 , pp. 21-35
    • Wang, Z.1    Hoffman, H.M.2    Grabowski, P.J.3
  • 34
    • 0027137934 scopus 로고
    • Specific interactions between proteins implicated in splice site selection and regulated alternative splicing
    • Wu, J. Y., and T. Maniatis. 1993. Specific interactions between proteins implicated in splice site selection and regulated alternative splicing. Cell 75: 1061-1070.
    • (1993) Cell , vol.75 , pp. 1061-1070
    • Wu, J.Y.1    Maniatis, T.2
  • 35
    • 0031569797 scopus 로고    scopus 로고
    • Crystal structure of human UP1. the domain of hnRNP A1 that contains two RNA 1 recognition motifs
    • Xu, R. M., I. Jokhan, X. Cheng, A. Mayeda, and A. R. Krainer. 1997. Crystal structure of human UP1. the domain of hnRNP A1 that contains two RNA 1 recognition motifs. Structure 5:559-570.
    • (1997) Structure , vol.5 , pp. 559-570
    • Xu, R.M.1    Jokhan, I.2    Cheng, X.3    Mayeda, A.4    Krainer, A.R.5
  • 36
    • 0024408832 scopus 로고
    • Identification, purification and characterization of U2 small nuclear ribonucleoprotein auxiliary factor
    • Zamore, P. D., and M. R. Green. 1989. Identification, purification and characterization of U2 small nuclear ribonucleoprotein auxiliary factor. Proc. 1 Natl. Acad. Sci. USA 86:9243-9247.
    • (1989) Proc. 1 Natl. Acad. Sci. USA , vol.86 , pp. 9243-9247
    • Zamore, P.D.1    Green, M.R.2
  • 37
    • 0026026981 scopus 로고
    • Biochemical characterization of U2 snRNP auxiliary factor: An essential pre-mRNA splicing factor with a novel 1 intracellular distribution
    • Zamore, P. D., and M. R. Green. 1991. Biochemical characterization of U2 snRNP auxiliary factor: an essential pre-mRNA splicing factor with a novel 1 intracellular distribution. EMBO J. 10:207-214.
    • (1991) EMBO J. , vol.10 , pp. 207-214
    • Zamore, P.D.1    Green, M.R.2
  • 38
    • 0029843012 scopus 로고    scopus 로고
    • Functional properties of p54, a novel SR protein active in constitutive and alternative splicing
    • Zhang, W.-J., and J. Y. Wu. 1996. Functional properties of p54, a novel SR protein active in constitutive and alternative splicing. Mol. Cell. Biol. 16: 1 5400-5408.
    • (1996) Mol. Cell. Biol. , vol.16 , pp. 15400-15408
    • Zhang, W.-J.1    Wu, J.Y.2
  • 39
    • 0029665533 scopus 로고    scopus 로고
    • 35 mediates critical protein-protein interactions in constitutive and enhancer-dependent splicing
    • 35 mediates critical protein-protein interactions in constitutive and enhancer-dependent splicing. Genes Dev. 10:1356-1368.
    • (1996) Genes Dev. , vol.10 , pp. 1356-1368
    • Zuo, P.1    Maniatis, T.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.