-
1
-
-
0025370815
-
Dominant forces in protein folding
-
Dill, K.A. Dominant forces in protein folding. Biochemistry29, 7133-7155 (1990).
-
(1990)
Biochemistry
, vol.29
, pp. 7133-7155
-
-
Dill, K.A.1
-
2
-
-
0025678737
-
Modelling of the three-dimensional architecture of group I catalytic introns based on comparative sequence analysis
-
Michel, F. & Westhof, E. Modelling of the three-dimensional architecture of group I catalytic introns based on comparative sequence analysis., /. Mol. Biol. 216, 585-610 (1990).
-
(1990)
Mol. Biol.
, vol.216
, pp. 585-610
-
-
Michel, F.1
Westhof, E.2
-
3
-
-
0029949699
-
Domain structure of the ribozyme from eubacterial ribonuclease
-
Loria, A. & Pan, T. Domain structure of the ribozyme from eubacterial ribonuclease P.RNA 2, 551-563(1996).
-
(1996)
P.RNA
, vol.2
, pp. 551-563
-
-
Loria, A.1
Pan, T.2
-
4
-
-
0027183545
-
Ribozymes: A distinct class of metalloenzymes
-
Pyle, A.M. Ribozymes: a distinct class of metalloenzymes. Science 261, 709-714 (1993).
-
(1993)
Science
, vol.261
, pp. 709-714
-
-
Pyle, A.M.1
-
5
-
-
0015497450
-
Conformational changes of transfer ribonnucleicacid: Equilibrium phase diagrams
-
Cole. P.E., Yang, S.K. & Crothers, D.M. Conformational changes of transfer ribonnucleicacid: Equilibrium phase diagrams Biochemistry 11, 4358-4368 (1972).
-
(1972)
Biochemistry
, vol.11
, pp. 4358-4368
-
-
Cole, P.E.1
Yang, S.K.2
Crothers, D.M.3
-
6
-
-
0027434244
-
Thermal unfolding of a group I ribozyme: The low-temperature transition is primarily disruption of tertiary structure
-
Banerjee, A.R., Jaeger, J.A. & Turner, D.H. Thermal unfolding of a group I ribozyme: the low-temperature transition is primarily disruption of tertiary structure. Biochemistry 32, 153-163 (1993).
-
(1993)
Biochemistry
, vol.32
, pp. 153-163
-
-
Banerjee, A.R.1
Jaeger, J.A.2
Turner, D.H.3
-
7
-
-
0027991626
-
Kinetic intermediates in RNA folding
-
Zarrinkar, P.P. & Williamson, J.R. Kinetic intermediates in RNA folding. Science 265, 918-924(1994).
-
(1994)
Science
, vol.265
, pp. 918-924
-
-
Zarrinkar, P.P.1
Williamson, J.R.2
-
8
-
-
0017762944
-
A nuclear magnetic resonance study of secondary and tertiary structure in yeast tRNA Phe
-
Robillard, G.T., Tarr, CE., Vosman, F. S Reid, B.R. A nuclear magnetic resonance study of secondary and tertiary structure in yeast tRNA Phe. Biochemistry 16, 5261-5273(1977).
-
(1977)
Biochemistry
, vol.16
, pp. 5261-5273
-
-
Robillard, G.T.1
Tarr, C.E.2
Vosman, F.S.3
Reid, B.R.4
-
9
-
-
0028063567
-
Three-dimensional structure of a hammerhead ribozyme
-
Pley, H.W., Flaherty, K.M. & McKay, D.B. Three-dimensional structure of a hammerhead ribozyme. Nature 372, 68-74 (1994).
-
(1994)
Nature 372
, pp. 68-74
-
-
Pley, H.W.1
Flaherty, K.M.2
McKay, D.B.3
-
10
-
-
0030476765
-
Capturing the structure of a catalytic RNA intermediate: The hammerhead ribozyme
-
Scott, W.G., Murray, J.B., Arnold, J.R.P., Stoddard, B.L & Klug, A. Capturing the structure of a catalytic RNA intermediate: the hammerhead ribozyme. Science 274, 2065-2069(1996).
-
(1996)
Science
, vol.274
, pp. 2065-2069
-
-
Scott, W.G.1
Murray, J.B.2
Arnold, J.R.P.3
Stoddard, B.L.4
Klug, A.5
-
11
-
-
0025963132
-
Visualizing the higher order folding of a catalytic RNA molecule
-
Celander, D.W. & Cech, T.R. Visualizing the higher order folding of a catalytic RNA molecule. Science 251, 401-407 (1991).
-
(1991)
Science
, vol.251
, pp. 401-407
-
-
Celander, D.W.1
Cech, T.R.2
-
13
-
-
0029904022
-
Kinetic pathway for folding of the Tetrahymena ribozyme revealed by three UV-inducible crosslinks
-
Downs, W.D. & Cech, T.R. Kinetic pathway for folding of the Tetrahymena ribozyme revealed by three UV-inducible crosslinks. RNA 2, 718-732 (1996).
-
(1996)
RNA
, vol.2
, pp. 718-732
-
-
Downs, W.D.1
Cech, T.R.2
-
14
-
-
0027173193
-
An independently folding domain of RNA tertiary structure within the Tetrahymena ribozyme
-
Murphy, F.L & Cech, T.R. An independently folding domain of RNA tertiary structure within the Tetrahymena ribozyme. Biochemistry 32, 5291-5300 (1993).
-
(1993)
Biochemistry
, vol.32
, pp. 5291-5300
-
-
Murphy, F.L.1
Cech, T.R.2
-
15
-
-
0029820625
-
Crystal structure of a group I ribozyme domain: Principles of RNA packing
-
Cate, J.H. et al. Crystal structure of a group I ribozyme domain: Principles of RNA packing. Science 273.1678-1685 (1996).
-
(1996)
Science
, vol.273
, pp. 1678-1685
-
-
Cate, J.H.1
-
16
-
-
0030587890
-
Metal binding sites in the major groove of a large ribozyme domain
-
Cate, J.H. & Doudna, J.A. Metal binding sites in the major groove of a large ribozyme domain. Structure 4, 1221-1229 (1996).
-
(1996)
Structure
, vol.4
, pp. 1221-1229
-
-
Cate, J.H.1
Doudna, J.A.2
-
17
-
-
0029796982
-
RNA tertiary structure mediation by adenosine platforms
-
Cate, J.H. et al. RNA tertiary structure mediation by adenosine platforms. Science 273, 1696-1699(1996).
-
(1996)
Science
, vol.273
, pp. 1696-1699
-
-
Cate, J.H.1
-
18
-
-
0027049570
-
Analysis of the role of phosphate oxygens in the group I intronfrom
-
Christian, E.L & Yarus, M. Analysis of the role of phosphate oxygens in the group I intronfrom Tetrahymena. J Mol. Biol. 228, 743-758(1992).
-
(1992)
Tetrahymena. J Mol. Biol.
, vol.228
, pp. 743-758
-
-
Christian, E.L.1
Yarus, M.2
-
19
-
-
0021769550
-
2+ complexes of adenine nucleotides and thionucleotides and rate constants for formation and dissociation of Mg-ATP and Mg-ADP
-
2+ complexes of adenine nucleotides and thionucleotides and rate constants for formation and dissociation of Mg-ATP and Mg-ADP. Biochemistry 23, 5262-5271 (1984).
-
(1984)
Biochemistry
, vol.23
, pp. 5262-5271
-
-
Pecoraro, V.L.1
Hermes, J.D.2
Cleland, W.W.3
-
20
-
-
0028301674
-
GAAA tetraloop and conserved bulge stabilize tertiary structure of a group I intron domain
-
Murphy, F.L. & Cech, T.R. GAAA tetraloop and conserved bulge stabilize tertiary structure of a group I intron domain. JMol. Biol. 236, 49-63 (1994).
-
(1994)
JMol. Biol.
, vol.236
, pp. 49-63
-
-
Murphy, F.L.1
Cech, T.R.2
-
21
-
-
0024283277
-
DNA and RNA sequence determination based on phosphorothioate chemistry
-
Gish, G. & Eckstein, F. DNA and RNA sequence determination based on phosphorothioate chemistry. Science 240, 1520-1522(1988).
-
(1988)
Science
, vol.240
, pp. 1520-1522
-
-
Gish, G.1
Eckstein, F.2
-
22
-
-
0022418143
-
Bond order and charge localization in nucleoside phosphorothioates
-
Frey, P.A. S Sammons, R.D. Bond order and charge localization in nucleoside phosphorothioates. Science 228, 541-545 (1985).
-
(1985)
Science
, vol.228
, pp. 541-545
-
-
Frey, P.A.S.1
Sammons, R.D.2
-
23
-
-
0023664514
-
Absolute configuration of Rpuridine 3', 5'-cyclic phosphorothioate
-
Hinrichs, W., Steifa, M., Saenger, W. S Eckstein, F. Absolute configuration of Rpuridine 3', 5'-cyclic phosphorothioate. Nucleic Acids Res. 15, 4945-4955 (1987).
-
(1987)
Nucleic Acids Res.
, vol.15
, pp. 4945-4955
-
-
Hinrichs, W.1
Steifa, M.2
Saenger, W.S.3
Eckstein, F.4
-
24
-
-
0017361887
-
Crystallographic study of metal-binding to yeast phenylalanine transfer RNA
-
Jack, A., Ladner, J.E., Rhodes, D., Brown, R.S. & Klug, A. A crystallographic study of metal-binding to yeast phenylalanine transfer RNA. J. Mol. Biol. 111, 315-328 (1977).
-
(1977)
J. Mol. Biol.
, vol.111
, pp. 315-328
-
-
Jack, A.1
Ladner, J.E.2
Rhodes, D.3
Brown, R.S.4
Klug, A.A.5
-
25
-
-
0017366365
-
RNA-ligand interactions: (1) magnesium binding sites in yeast tRNAPhe
-
Holbrook, S.R., Sussman, J.L., Warrant. R.W., Church, G.M. & Kim, S.-H. RNA-ligand interactions: (1) magnesium binding sites in yeast tRNAPhe. Nucleic Adds Res. 4, 2811-2820(1977).
-
(1977)
Nucleic Adds Res.
, vol.4
, pp. 2811-2820
-
-
Holbrook, S.R.1
Sussman, J.L.2
Warrant, R.W.3
Church, G.M.4
Kim, S.-H.5
-
26
-
-
0029564595
-
Are buried salt bridges important for protein stability and conformational specificity?
-
Waldburger, CD., Schildbach, J.F. & Sauer, R.T. Are buried salt bridges important for protein stability and conformational specificity? Nature Struct. Biol. 2, 122-128 (1995).
-
(1995)
Nature Struct. Biol.
, vol.2
, pp. 122-128
-
-
Waldburger, C.D.1
Schildbach, J.F.2
Sauer, R.T.3
-
27
-
-
0028204490
-
Do salt bridges stabilize proteins? a continuum electrostatic analysis
-
Hendsch, Z.S. & Tidor, B. Do salt bridges stabilize proteins? A continuum electrostatic analysis. Prot. Sei. 3, 211-226 (1994).
-
(1994)
Prot. Sei.
, vol.3
, pp. 211-226
-
-
Hendsch, Z.S.1
Tidor, B.2
-
28
-
-
4243067681
-
Protein stabilization by removal of unsatisfied polar groups: Computational approaches and experimental tests
-
Hendsch, Z.S., Jonsson, T., Sauer, R.T. & Tidor. B. Protein stabilization by removal of unsatisfied polar groups: computational approaches and experimental tests. Biochemistry 35, 7621-762S (1996).
-
(1996)
Biochemistry 35
-
-
Hendsch, Z.S.1
Jonsson, T.2
Sauer, R.T.3
Tidor, B.4
-
29
-
-
0025091663
-
Melting and chemical modification of a cyclized self-splicing group I intron: Similarity of structures in 1 M Nat, in 10 mM Mg2+, and in the presence of substrate
-
Jaeger, J.A., Zuker, M. & Turner, D.H. Melting and chemical modification of a cyclized self-splicing group I intron: similarity of structures in 1 M Nat, in 10 mM Mg2+, and in the presence of substrate. Biochemistry 29, 10147-10158 (1990).
-
(1990)
Biochemistry
, vol.29
, pp. 10147-10158
-
-
Jaeger, J.A.1
Zuker, M.2
Turner, D.H.3
-
30
-
-
0028105774
-
Metal ion dependence of active-site structure of the Tetrahymena ribozyme revealed by site-specific photo-cross-linking
-
Wang, J.-F. & Cech, T.R. Metal ion dependence of active-site structure of the Tetrahymena ribozyme revealed by site-specific photo-cross-linking. J. Am. Chem. Soc.116, 4178(1994).
-
(1994)
J. Am. Chem. Soc.
, vol.116
, pp. 4178
-
-
Wang, J.-F.1
Cech, T.R.2
-
31
-
-
0027247579
-
Metal coordination sites that contribute to structure and catalysis in the group I intron from
-
Christian, E.L. & Yarus, M. Metal coordination sites that contribute to structure and catalysis in the group I intron from Tetrahymena. Biochemistry 32, 4475-4480 (1993).
-
(1993)
Tetrahymena. Biochemistry
, vol.32
, pp. 4475-4480
-
-
Christian, E.L.1
Yarus, M.2
-
32
-
-
0030965811
-
Defining the chemical groups essential for Tetrahymena group I intron function by nucleotide analog interference mapping
-
Strobel, S.A. & Shetty, K. Defining the chemical groups essential for Tetrahymena group I intron function by nucleotide analog interference mapping. Proc. Natl. Acad. Sel. U.S.A. 94, 2903 (1997).
-
(1997)
Proc. Natl. Acad. Sel. U.S.A.
, vol.94
, pp. 2903
-
-
Strobel, S.A.1
Shetty, K.2
-
33
-
-
0024967388
-
Catalytic activity is retained in the Tetrahymena group I intron despite removal of the large extension of element P5
-
Joyce, G.F., van der Horst, G. & Inoue, T. Catalytic activity is retained in the Tetrahymena group I intron despite removal of the large extension of element P5. Nucleic Acids Res 17, 7879-7889 (1989).
-
(1989)
Nucleic Acids Res
, vol.17
, pp. 7879-7889
-
-
Joyce, G.F.1
Van Der Horst, G.2
Inoue, T.3
-
34
-
-
0028239266
-
Two major tertiary folding transitions of the
-
Laggerbauer, B., Murphy, F.L & Cech, T.R. Two major tertiary folding transitions of the Tetrahymena catalytic RNA. CMBOJ. 13, 2669-2676 (1994).
-
(1994)
Tetrahymena Catalytic RNA. CMBOJ.
, vol.13
, pp. 2669-2676
-
-
Laggerbauer, B.1
Murphy, F.L.2
Cech, T.R.3
-
35
-
-
0026017131
-
Reconstitution of a group I intron selfsplicing reaction with an activator RNA
-
van der Horst, G., Christian, A. & Inoue, T. Reconstitution of a group I intron selfsplicing reaction with an activator RNA. Proc. Watl. Acad. Sei. USA 88, 184-188 (1991).
-
(1991)
Proc. Watl. Acad. Sei. USA
, vol.88
, pp. 184-188
-
-
Van Der Horst, G.1
Christian, A.2
Inoue, T.3
-
36
-
-
0030452773
-
New loop-loop tertiary interactions in self-splicing introns of subgroup 1C and ID - A complete 3D model of the Tetrahymena thermophila ribozyme
-
Lehnen, V., Jaeger, L, Michel, F. & Westhof, E. New loop-loop tertiary interactions in self-splicing introns of subgroup 1C and ID - A complete 3D model of the Tetrahymena thermophila ribozyme. Chem. & Biol. 3, 993-1009 (1996).
-
(1996)
Chem. & Biol.
, vol.3
, pp. 993-1009
-
-
Lehnen, V.1
Jaeger, L.2
Michel, F.3
Westhof, E.4
-
37
-
-
0029864990
-
The P9.1-P9.2 peripheral extension helps guide folding of the Tetrahymena ribozyme
-
Zarrinkar, P.P. & Williamson, J.R. The P9.1-P9.2 peripheral extension helps guide folding of the Tetrahymena ribozyme. Nucleic Acids Res. 24, 854 (1996).
-
(1996)
Nucleic Acids Res.
, vol.24
, pp. 854
-
-
Zarrinkar, P.P.1
Williamson, J.R.2
-
38
-
-
0026766977
-
Zinc proteins: Enzymes, storage proteins, transcription factors and replication proteins
-
Coleman, J.E. Zinc proteins: enzymes, storage proteins, transcription factors and replication proteins. Anmi. Rev. Biochem. 61, 897-946 (1992).
-
(1992)
Anmi. Rev. Biochem.
, vol.61
, pp. 897-946
-
-
Coleman, J.E.1
-
39
-
-
0030025082
-
Disulfide determinants of calcium-induced packing in alpha-lactalbumin
-
Wu, L.C., Schulman, B.A., Peng, Z. & Kim, P.S. Disulfide determinants of calcium-induced packing in alpha-lactalbumin. Biochemistry 3S, 859-863 (1996).
-
(1996)
Biochemistry
, vol.3 S
, pp. 859-863
-
-
Wu, L.C.1
Schulman, B.A.2
Peng, Z.3
Kim, P.S.4
-
41
-
-
0028103275
-
-
Collaborative Computing Project, N.4. The CCP4 suite: programs for protein crystallography. Acta Crystallogr.. D 50, 760-763 (1994).
-
(1994)
Acta Crystallogr..
, vol.50 D
, pp. 760-763
-
-
-
42
-
-
0027237520
-
Crystallization of ribozymes and small RNA motifs by a sparse matrix approach
-
Doudna, J.A., Grosshans. C, Gooding, A. & Kundrot, C.E. Crystallization of ribozymes and small RNA motifs by a sparse matrix approach. Proc Watl Acad Sri USA 90, 7829-7833 (1993).
-
(1993)
Proc Watl Acad Sri USA
, vol.90
, pp. 7829-7833
-
-
Doudna, J.A.1
Grosshans, C.2
Gooding, A.3
Kundrot, C.E.4
|