-
2
-
-
0028123452
-
A specific orientation of RNA secondary structures is required for initiation of reverse transcription
-
Aiyar, A., Z. Ge, and J. Leis. 1994. A specific orientation of RNA secondary structures is required for initiation of reverse transcription. J. Virol. 68:611-618.
-
(1994)
J. Virol.
, vol.68
, pp. 611-618
-
-
Aiyar, A.1
Ge, Z.2
Leis, J.3
-
3
-
-
0029682812
-
Site-directed mutagenesis using overlap extension PCR
-
Aiyar, A., Y. Xiang, and J. Leis. 1995. Site-directed mutagenesis using overlap extension PCR. Methods Mol. Biol. 57:177-191.
-
(1995)
Methods Mol. Biol.
, vol.57
, pp. 177-191
-
-
Aiyar, A.1
Xiang, Y.2
Leis, J.3
-
4
-
-
0029974222
-
Concerted integration of linear retroviral DNA by the ASV integrase in vitro: Dependence on both long terminal repeat termini
-
Aiyar, A., P. Hindmarsh, A. M. Skalka, and J. Leis. 1996. Concerted integration of linear retroviral DNA by the ASV integrase in vitro: dependence on both long terminal repeat termini. J. Virol. 70:3571-3580.
-
(1996)
J. Virol.
, vol.70
, pp. 3571-3580
-
-
Aiyar, A.1
Hindmarsh, P.2
Skalka, A.M.3
Leis, J.4
-
5
-
-
0027396856
-
Avian retroviral RNA encapsidation: Reexamination of functional 5′ RNA sequences and the role of nucleocapsid Cys-His motifs
-
Aronoff, R., A. M. Hajjar, and M. Linial. 1993. Avian retroviral RNA encapsidation: reexamination of functional 5′ RNA sequences and the role of nucleocapsid Cys-His motifs. J. Virol. 67:178-188.
-
(1993)
J. Virol.
, vol.67
, pp. 178-188
-
-
Aronoff, R.1
Hajjar, A.M.2
Linial, M.3
-
6
-
-
0029664626
-
Restoration of tRNA-primed minus strand DNA synthesis to a reverse transcriptase mutant with tRNA/DNA chimeras: TRNA-viral RNA duplexes and initiation of HIV replication
-
Arts, E., M. Ghosh, P. Jacques, B. Ehresmann, and S. LeGrice. 1996. Restoration of tRNA-primed minus strand DNA synthesis to a reverse transcriptase mutant with tRNA/DNA chimeras: tRNA-viral RNA duplexes and initiation of HIV replication. J. Biol. Chem. 271:9054-9061.
-
(1996)
J. Biol. Chem.
, vol.271
, pp. 9054-9061
-
-
Arts, E.1
Ghosh, M.2
Jacques, P.3
Ehresmann, B.4
Legrice, S.5
-
7
-
-
0029814780
-
Lys-3 interactions inhibiting primer utilization by retroviral reverse transcriptases
-
Lys-3 interactions inhibiting primer utilization by retroviral reverse transcriptases. Proc. Natl. Acad. Sci. USA 93:10063-10068.
-
(1996)
Proc. Natl. Acad. Sci. USA
, vol.93
, pp. 10063-10068
-
-
Arts, E.1
Stetor, S.2
Li, X.3
Rausch, J.4
Howard, K.5
Ehresmann, B.6
North, T.7
Wohrl, B.8
Goody, R.9
Wainberg, M.10
Legrice, S.11
-
8
-
-
0027479628
-
Functional sites in the 5' region of HIV-1 RNA form defined structural domains
-
Baudin, F., R. Marquet, C. Isel, J.-L. Darlix, B. Ehresmann, and C. Ehresmann. 1993. Functional sites in the 5' region of HIV-1 RNA form defined structural domains. J. Mol. Biol. 229:382-397.
-
(1993)
J. Mol. Biol.
, vol.229
, pp. 382-397
-
-
Baudin, F.1
Marquet, R.2
Isel, C.3
Darlix, J.-L.4
Ehresmann, B.5
Ehresmann, C.6
-
9
-
-
0027267286
-
Secondary structure of HIV-2 leader RNA comprising the tRNA-primer binding site
-
Berkhout, B., and I. Schoneveld. 1993. Secondary structure of HIV-2 leader RNA comprising the tRNA-primer binding site. Nucleic Acids Res. 21:1171-1178.
-
(1993)
Nucleic Acids Res.
, vol.21
, pp. 1171-1178
-
-
Berkhout, B.1
Schoneveld, A.I.2
-
10
-
-
0025043509
-
A mutant of human immunodeficiency virus with reduced RNA packaging and abnormal particle morphology
-
Clavel, F., and J. Orenstein. 1990. A mutant of human immunodeficiency virus with reduced RNA packaging and abnormal particle morphology. J. Virol. 64:5230-5234.
-
(1990)
J. Virol.
, vol.64
, pp. 5230-5234
-
-
Clavel, F.1
Orenstein, A.J.2
-
11
-
-
0028904512
-
RNA secondary structure and binding sites for gag gene products in the 5′ packaging signal of human immunodeficiency virus type 1
-
Clever, J., C. Saddetti, and T. Parslow. 1995. RNA secondary structure and binding sites for gag gene products in the 5′ packaging signal of human immunodeficiency virus type 1. J. Virol. 69:2101-2109.
-
(1995)
J. Virol.
, vol.69
, pp. 2101-2109
-
-
Clever, J.1
Saddetti, C.2
Parslow, T.3
-
12
-
-
0025861696
-
Overlapping retroviral U5 sequence elements are required for efficient integration and initiation of reverse transcription
-
Cobrinik, D., A. Aiyar, Z. Ge, M. Katzman, H. Huang, and J, Leis. 1991. Overlapping retroviral U5 sequence elements are required for efficient integration and initiation of reverse transcription. J. Virol. 65:3864-3872.
-
(1991)
J. Virol.
, vol.65
, pp. 3864-3872
-
-
Cobrinik, D.1
Aiyar, A.2
Ge, Z.3
Katzman, M.4
Huang, H.5
Leis, J.6
-
13
-
-
0023732046
-
A retroviral RNA secondary structure required for efficient initiation of reverse transcription
-
Cobrinik, D., L. Soskey, and J. Leis. 1988. A retroviral RNA secondary structure required for efficient initiation of reverse transcription. J. Virol. 62:3622-3630.
-
(1988)
J. Virol.
, vol.62
, pp. 3622-3630
-
-
Cobrinik, D.1
Soskey, L.2
Leis, J.3
-
15
-
-
0026760617
-
Role of the open reading frames of Rous sarcoma virus leader RNA in translation and genome packaging
-
Donze, O., and P.-F. Spahr. 1992. Role of the open reading frames of Rous sarcoma virus leader RNA in translation and genome packaging. EMBO J. 11:3747-3757.
-
(1992)
EMBO J.
, vol.11
, pp. 3747-3757
-
-
Donze, O.1
Spahr, A.P.-F.2
-
16
-
-
0028925912
-
The first and third uORFs in RSV leader RNA are efficiently translated: Implications for translational regulation and viral RNA packaging
-
Donze, O., P. Damay, and P.-F. Spahr. 1995. The first and third uORFs in RSV leader RNA are efficiently translated: implications for translational regulation and viral RNA packaging. Nucleic Acids Res. 23:861-868.
-
(1995)
Nucleic Acids Res.
, vol.23
, pp. 861-868
-
-
Donze, O.1
Damay, P.2
Spahr, P.-F.3
-
17
-
-
0026329560
-
Phylogenetic and physical analysis of the 5′ leader RNA sequences of avian retroviruses
-
Hackett, P. B., M. W. Dalton, D. P. Johnson, and R. B. Petersen. 1991. Phylogenetic and physical analysis of the 5′ leader RNA sequences of avian retroviruses. Nucleic Acids Res. 19:6929-6934.
-
(1991)
Nucleic Acids Res.
, vol.19
, pp. 6929-6934
-
-
Hackett, P.B.1
Dalton, M.W.2
Johnson, D.P.3
Petersen, R.B.4
-
18
-
-
0026647836
-
The human immunodeficiency virus type 1 packaging signal and major splice donor region have a conserved stable secondary structure
-
Harrison, G., and A. Lever. 1992. The human immunodeficiency virus type 1 packaging signal and major splice donor region have a conserved stable secondary structure, J. Virol. 66:4144-4153.
-
(1992)
J. Virol.
, vol.66
, pp. 4144-4153
-
-
Harrison, G.1
Lever, A.2
-
19
-
-
0026632944
-
RNA packaging signal of human immunodeficiency virus type 1
-
Hayashi, T., T. Shioda, Y. Iwakura, and H. Shibuta. 1992. RNA packaging signal of human immunodeficiency virus type 1. Virology 188:590-599.
-
(1992)
Virology
, vol.188
, pp. 590-599
-
-
Hayashi, T.1
Shioda, T.2
Iwakura, Y.3
Shibuta, H.4
-
21
-
-
0030019943
-
Lys,3
-
Lys,3. EMBO J. 15:917-924.
-
(1996)
EMBO J.
, vol.15
, pp. 917-924
-
-
Isel, C.1
Lanchy, J.-M.2
Legrice, S.3
Ehresmann, C.4
Ehresmann, B.5
Marquet, R.6
-
22
-
-
0030586782
-
Mutations in both the U5 region and primer binding site influence the selection of the tRNA used for initiation of HIV-1 reverse transcription
-
Kang, S.-M., J. Wakefield, and C. Morrow. 1996. Mutations in both the U5 region and primer binding site influence the selection of the tRNA used for initiation of HIV-1 reverse transcription. Virology 222:401-414.
-
(1996)
Virology
, vol.222
, pp. 401-414
-
-
Kang, S.-M.1
Wakefield, J.2
Morrow, C.3
-
24
-
-
0022527281
-
A conserved c/s-acting sequence in the 5′ leader of avian sarcoma virus RNA is required for packaging
-
Katz, R., R. Terry, and A. M. Skalka. 1986. A conserved c/s-acting sequence in the 5′ leader of avian sarcoma virus RNA is required for packaging. J. Virol. 59:163-167.
-
(1986)
J. Virol.
, vol.59
, pp. 163-167
-
-
Katz, R.1
Terry, R.2
Skalka, A.M.3
-
25
-
-
0024431589
-
The avian retroviral integration protein cleaves the terminal sequences of linear viral DNA at the in vivo sites of integration
-
Katzman, M., R. A. Katz, A. M. Skalka, and J. Leis. 1989. The avian retroviral integration protein cleaves the terminal sequences of linear viral DNA at the in vivo sites of integration. J. Virol. 63:5319-5327.
-
(1989)
J. Virol.
, vol.63
, pp. 5319-5327
-
-
Katzman, M.1
Katz, R.A.2
Skalka, A.M.3
Leis, J.4
-
26
-
-
0028332542
-
A base-paired structure in the avian sarcoma virus 5′ leader is required for efficient encapsidation of RNA
-
Knight, J. B., Z. H. Si, and C. M. Stoltzfus. 1994. A base-paired structure in the avian sarcoma virus 5′ leader is required for efficient encapsidation of RNA. J. Virol. 68:4493-4502.
-
(1994)
J. Virol.
, vol.68
, pp. 4493-4502
-
-
Knight, J.B.1
Si, Z.H.2
Stoltzfus, C.M.3
-
28
-
-
0017141769
-
RNA-dependent DNA polymerase activity of RNA tumor viruses
-
Leis, J. 1976. RNA-dependent DNA polymerase activity of RNA tumor viruses. J. Virol. 19:932-939.
-
(1976)
J. Virol.
, vol.19
, pp. 932-939
-
-
Leis, J.1
-
29
-
-
0003143370
-
Regulation of initiation of reverse transcription of retroviruses
-
A. M. Skalka and S. P. Goff (ed.), Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y
-
Lets, J., A. Aiyar, and D. Cobrinik. 1993. Regulation of initiation of reverse transcription of retroviruses, p. 33-47. In A. M. Skalka and S. P. Goff (ed.), Reverse transcriptase. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y.
-
(1993)
Reverse Transcriptase
, pp. 33-47
-
-
Lets, J.1
Aiyar, A.2
Cobrinik, D.3
-
30
-
-
0024320772
-
Identification of a sequence for efficient packaging of human immunodeficiency virus type 1 RNA into virions
-
Lever, A., H. Gottlinger, W. Haseltine, and J. Sodroski. 1989. Identification of a sequence for efficient packaging of human immunodeficiency virus type 1 RNA into virions. J. Virol. 63:4085-4087.
-
(1989)
J. Virol.
, vol.63
, pp. 4085-4087
-
-
Lever, A.1
Gottlinger, H.2
Haseltine, W.3
Sodroski, J.4
-
31
-
-
0028122546
-
Effects of alterations of primer-binding site sequences on human immunodeficiency virus type 1 replication
-
Li, X., J. Mak, E. J. Arts, Z. Gu, L. Kldman, M, A. Wainberg, and M. A. Parniak. 1994. Effects of alterations of primer-binding site sequences on human immunodeficiency virus type 1 replication. J. ViroL 68:6198-6206.
-
(1994)
J. ViroL
, vol.68
, pp. 6198-6206
-
-
Li, X.1
Mak, J.2
Arts, E.J.3
Gu, Z.4
Kldman, L.5
Wainberg, M.A.6
Parniak, M.A.7
-
32
-
-
0021823925
-
Varying the position of a retrovirus packaging sequence results in the encapsidation of both unspliced and spliced RNAs
-
Mann, R., and D. Baltimore. 1985. Varying the position of a retrovirus packaging sequence results in the encapsidation of both unspliced and spliced RNAs. J. Virol. 54:401-407.
-
(1985)
J. Virol.
, vol.54
, pp. 401-407
-
-
Mann, R.1
Baltimore, A.D.2
-
33
-
-
0029040494
-
The bovine leukemia virus encapsidation signal is discontinuous and extends into the 5′ end of the gag gene
-
Mansky, L. M., A. E. Krueger, and H, M. Temin. 1995. The bovine leukemia virus encapsidation signal is discontinuous and extends into the 5′ end of the gag gene. J. Virol. 69:3282-3289.
-
(1995)
J. Virol.
, vol.69
, pp. 3282-3289
-
-
Mansky, L.M.1
Krueger, A.E.2
Temin, H.M.3
-
34
-
-
9244219568
-
The human immunodeficiency virus type 1 encapsidation site is a multipartite RNA element composed of functional hairpin structures
-
McBride, S., and A. Panganiban. 1996. The human immunodeficiency virus type 1 encapsidation site is a multipartite RNA element composed of functional hairpin structures. J. Virol. 70:2963-2973.
-
(1996)
J. Virol.
, vol.70
, pp. 2963-2973
-
-
McBride, S.1
Panganiban, A.2
-
35
-
-
0023651444
-
Oligoribonucleotide synthesis using T7 RNA polymerase and synthetic DNA templates
-
Milligan, J., D. Groebe, G. Witherell, and O, Uhlenbeck. 1987. Oligoribonucleotide synthesis using T7 RNA polymerase and synthetic DNA templates. Nucleic Acids Res. 15:8783-8798.
-
(1987)
Nucleic Acids Res.
, vol.15
, pp. 8783-8798
-
-
Milligan, J.1
Groebe, D.2
Witherell, G.3
Uhlenbeck, O.4
-
37
-
-
0030001105
-
Cis-active structural motifs in specific encapsidation of Moloney murine leukemia virus RNA
-
Mougel, M., Y. Zhang, and E. Barklis. 1996. cis-active structural motifs in specific encapsidation of Moloney murine leukemia virus RNA. J. Virol. 70:5043-5050.
-
(1996)
J. Virol.
, vol.70
, pp. 5043-5050
-
-
Mougel, M.1
Zhang, Y.2
Barklis, E.3
-
38
-
-
0027426883
-
Conformational analysis of the 5′ leader and the gag initiation site of Mo-MuLV RNA and allosteric transitions induced by dimerization
-
Mougel, M., N. Touneki, J.-L. Darlix, J. Paoletti, B. Ehresmann, and C. Ehresmann. 1993. Conformational analysis of the 5′ leader and the gag initiation site of Mo-MuLV RNA and allosteric transitions induced by dimerization. Nucleic Acids Res. 21:4677-4684.
-
(1993)
Nucleic Acids Res.
, vol.21
, pp. 4677-4684
-
-
Mougel, M.1
Touneki, N.2
Darlix, J.-L.3
Paoletti, J.4
Ehresmann, B.5
Ehresmann, C.6
-
39
-
-
0027159960
-
Alterations of the three short open reading frames in the Rous sarcoma virus leader RNA modulate viral replication and gene expression
-
Moustakas, A., T. Sonstegaard, and P. Hackett. 1993. Alterations of the three short open reading frames in the Rous sarcoma virus leader RNA modulate viral replication and gene expression. J. Virol. 67:4337-4349.
-
(1993)
J. Virol.
, vol.67
, pp. 4337-4349
-
-
Moustakas, A.1
Sonstegaard, T.2
Hackett, P.3
-
40
-
-
0024548408
-
Construction and analysis of deletion, mutations in the U5 region of Moloney murine leukemia virus: Effects 41 RNA packaging and reverse transcription
-
Murphy, J. E., and S. P. Goff. 1989. Construction and analysis of deletion, mutations in the U5 region of Moloney murine leukemia virus: effects 41 RNA packaging and reverse transcription. J. Virol. 63:319-327.
-
(1989)
J. Virol.
, vol.63
, pp. 319-327
-
-
Murphy, J.E.1
Goff, A.S.P.2
-
41
-
-
0024075591
-
Mutational analysis of the 5′ non-coding region of human immunodeficiency virus type 1: Effects of secondary structure on translation
-
Parkin, N. T., E. A. Cohen, A. Darveau, C. Rosen, W. Haseltine, and N. Sonenberg. 1988. Mutational analysis of the 5′ non-coding region of human immunodeficiency virus type 1: effects of secondary structure on translation. EMBO J. 7:2831-2837.
-
(1988)
EMBO J.
, vol.7
, pp. 2831-2837
-
-
Parkin, N.T.1
Cohen, E.A.2
Darveau, A.3
Rosen, C.4
Haseltine, W.5
Sonenberg, N.6
-
42
-
-
0027480059
-
Simian immunodeficiency virus RNA is efficiently encapsidated by human immunodeficiency virus type I particles
-
Rizvi, T., and A. Panganiban. 1993. Simian immunodeficiency virus RNA is efficiently encapsidated by human immunodeficiency virus type I particles. J. Virol. 67:2681-2688.
-
(1993)
J. Virol.
, vol.67
, pp. 2681-2688
-
-
Rizvi, T.1
Panganiban, A.2
-
43
-
-
0004136246
-
-
Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y
-
Sambrook, J., E. F. Fritsch, and T. Maniatis. 1989. Molecular cloning: a laboratory manual, 2nd ed. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y.
-
(1989)
Molecular Cloning: a Laboratory Manual, 2nd Ed.
-
-
Sambrook, J.1
Fritsch, E.F.2
Maniatis, T.3
-
44
-
-
0020594561
-
Nucleotide sequence of Rous sarcoma virus
-
Schwartz, D. E., R. Tizard, and W. Gilbert. 1983. Nucleotide sequence of Rous sarcoma virus. Cell 22:853-869.
-
(1983)
Cell
, vol.22
, pp. 853-869
-
-
Schwartz, D.E.1
Tizard, R.2
Gilbert, W.3
-
45
-
-
0029010766
-
RNA sequences controlling the initiation and transfer of duck hepatitis B virus minus-strand DNA
-
Tavis, J. E., and D. Ganem. 1995. RNA sequences controlling the initiation and transfer of duck hepatitis B virus minus-strand DNA. J, ViroL 69:4283-4291.
-
(1995)
J, ViroL
, vol.69
, pp. 4283-4291
-
-
Tavis, J.E.1
Ganem, D.2
-
46
-
-
0026651981
-
RNA pseudoknots that inhibit human immunodeficiency virus type 1 reverse transcriptase
-
Tuerk, C., S. MacDougaK and L. Gold. 1992. RNA pseudoknots that inhibit human immunodeficiency virus type 1 reverse transcriptase. Proc. Natl. Acad. Sci. USA 89:6988-6992.
-
(1992)
Proc. Natl. Acad. Sci. USA
, vol.89
, pp. 6988-6992
-
-
Tuerk, C.1
MacDougak, S.2
Gold, L.3
-
47
-
-
0030013267
-
Mutations within the primer binding site of human immunodeficiency virus type 1 define sequence requirements essential for reverse transcription
-
Wakefield, J. K., and C. D. Morrow. 1996. Mutations within the primer binding site of human immunodeficiency virus type 1 define sequence requirements essential for reverse transcription. Virology 220:290-298.
-
(1996)
Virology
, vol.220
, pp. 290-298
-
-
Wakefield, J.K.1
Morrow, C.D.2
-
49
-
-
0027952631
-
A double hairpin structure is necessary for the efficient encapsidation of spleen necrosis virus retroviral RNA
-
Yang, S., and H. Temin. 1994. A double hairpin structure is necessary for the efficient encapsidation of spleen necrosis virus retroviral RNA. EMBO J. 13:713-726.
-
(1994)
EMBO J.
, vol.13
, pp. 713-726
-
-
Yang, S.1
Temin, A.H.2
-
50
-
-
0029149643
-
Nucleocapsid protein effects on the specificity of retrovirus RNA encapsidation
-
Zhang, Y., and E. Barklis. 1995. Nucleocapsid protein effects on the specificity of retrovirus RNA encapsidation. J. Virol. 69:5716-5722.
-
(1995)
J. Virol.
, vol.69
, pp. 5716-5722
-
-
Zhang, Y.1
Barklis, E.2
|