메뉴 건너뛰기




Volumn 7, Issue 3, 1997, Pages 405-409

From gene to screen with yeast

Author keywords

[No Author keywords available]

Indexed keywords

FUNGAL RNA;

EID: 0030750492     PISSN: 0959437X     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0959-437X(97)80156-6     Document Type: Article
Times cited : (40)

References (49)
  • 2
    • 17144474759 scopus 로고    scopus 로고
    • Entire E. coli genome sequenced - at last
    • O'Brien C: Entire E. coli genome sequenced - at last. Nature 1997, 385:472.
    • (1997) Nature , vol.385 , pp. 472
    • O'Brien, C.1
  • 3
    • 0029955765 scopus 로고    scopus 로고
    • The European Bacillus subtilis genome sequencing project - Current status and accessibility of the data from a new world-wide-web site
    • Moszer I, Kunst F, Danchin A: The European Bacillus subtilis genome sequencing project - current status and accessibility of the data from a new world-wide-web site. Microbiology 1996, 142:2987-2991.
    • (1996) Microbiology , vol.142 , pp. 2987-2991
    • Moszer, I.1    Kunst, F.2    Danchin, A.3
  • 4
    • 0029911218 scopus 로고    scopus 로고
    • The systematic sequencing of Bacillus subtilis genome in Japan
    • Ogasawara N, Yoshikawa H: The systematic sequencing of Bacillus subtilis genome in Japan. Microbiology 1996, 142:2993-2994.
    • (1996) Microbiology , vol.142 , pp. 2993-2994
    • Ogasawara, N.1    Yoshikawa, H.2
  • 5
    • 0028803763 scopus 로고
    • The genome of Caenorhabditis elegans
    • Waterston R, Sulston J: The genome of Caenorhabditis elegans. Proc Natl Acad Sci USA 1995, 92:10836-10840.
    • (1995) Proc Natl Acad Sci USA , vol.92 , pp. 10836-10840
    • Waterston, R.1    Sulston, J.2
  • 6
    • 0030071902 scopus 로고    scopus 로고
    • From DNA sequence to biological function
    • Oliver SG: From DNA sequence to biological function. Nature 1996, 379:597-600. A comprehensive consideration of the strategies that may be employed in the elucidation of the function of novel genes revealed by systematic genome sequencing. In this paper, I concentrate on yeast but include concepts of general relevance to functional genomics.
    • (1996) Nature , vol.379 , pp. 597-600
    • Oliver, S.G.1
  • 7
    • 0029954881 scopus 로고    scopus 로고
    • Towards a complete understanding of how a simple eukaryotic cell works
    • Johnston M: Towards a complete understanding of how a simple eukaryotic cell works. Trends Genet 1996, 12:242-243.
    • (1996) Trends Genet , vol.12 , pp. 242-243
    • Johnston, M.1
  • 8
    • 0029973775 scopus 로고    scopus 로고
    • A network approach to the systematic analysis of yeast gene function
    • Oliver SG: A network approach to the systematic analysis of yeast gene function. Trends in Genet 1996, 12:241-242.
    • (1996) Trends in Genet , vol.12 , pp. 241-242
    • Oliver, S.G.1
  • 12
    • 0028676232 scopus 로고
    • New heterologous modules for classical or PCR-based gene disruptions in Saccharomyces cerevisiae
    • Wach A, Brachat A, Pohlmann R, Philippsen P: New heterologous modules for classical or PCR-based gene disruptions in Saccharomyces cerevisiae. Yeast 1994, 10:1793-1808.
    • (1994) Yeast , vol.10 , pp. 1793-1808
    • Wach, A.1    Brachat, A.2    Pohlmann, R.3    Philippsen, P.4
  • 13
    • 0028884177 scopus 로고
    • Precise gene disruption in Saccharomyces cerevisiae by double fusion polymerase chain reaction
    • Amberg DC, Botstein D, Beasley EM: Precise gene disruption in Saccharomyces cerevisiae by double fusion polymerase chain reaction. Yeast 1995, 11:1275-1280.
    • (1995) Yeast , vol.11 , pp. 1275-1280
    • Amberg, D.C.1    Botstein, D.2    Beasley, E.M.3
  • 14
    • 0029871347 scopus 로고    scopus 로고
    • PCR-synthesis of marker cassettes with long flanking homology regions for gene disruptions in S. cerevisiae
    • Wach A: PCR-synthesis of marker cassettes with long flanking homology regions for gene disruptions in S. cerevisiae. Yeast 1996, 12:259-265.
    • (1996) Yeast , vol.12 , pp. 259-265
    • Wach, A.1
  • 15
    • 0029836924 scopus 로고    scopus 로고
    • New vectors for combinatorial deletions in yeast chromosomes and for gap-repair cloning using split-marker recombination
    • Fairhead C, Llorente B, Denis F, Soler M, Dujon B: New vectors for combinatorial deletions in yeast chromosomes and for gap-repair cloning using split-marker recombination. Yeast 1996, 12:1439-1458.
    • (1996) Yeast , vol.12 , pp. 1439-1458
    • Fairhead, C.1    Llorente, B.2    Denis, F.3    Soler, M.4    Dujon, B.5
  • 17
    • 0029805415 scopus 로고    scopus 로고
    • Intergenic flip flop, a method for systematic gene disruption and cloning in yeast
    • Mallet L, Jacquet M: Intergenic flip flop, a method for systematic gene disruption and cloning in yeast. Yeast 1996, 12:1351-1358.
    • (1996) Yeast , vol.12 , pp. 1351-1358
    • Mallet, L.1    Jacquet, M.2
  • 18
    • 0029804246 scopus 로고    scopus 로고
    • Quantitative phenotypic analysis of yeast deletion mutants using a highly parallel molecular bar-coding strategy
    • Shoemaker DD, Lashkari DA, Morris D, Mittmann M, Davis RW: Quantitative phenotypic analysis of yeast deletion mutants using a highly parallel molecular bar-coding strategy. Nat Genet 1996, 14:450-456. This article explains how individual yeast strains may be provided with unique molecular tags as part of the gene-replacement protocol (see [12]) used to construct specific yeast deletion mutants.
    • (1996) Nat Genet , vol.14 , pp. 450-456
    • Shoemaker, D.D.1    Lashkari, D.A.2    Morris, D.3    Mittmann, M.4    Davis, R.W.5
  • 20
    • 0030574107 scopus 로고    scopus 로고
    • Top down metabolic control analysis
    • Brand MD: Top down metabolic control analysis. J Theor Biol 1996, 182:351-360.
    • (1996) J Theor Biol , vol.182 , pp. 351-360
    • Brand, M.D.1
  • 21
    • 14744275430 scopus 로고
    • Heritable damage to yeast caused by transformation
    • Danhash N, Gardner DCJ, Oliver SG: Heritable damage to yeast caused by transformation. Bio-Technology 1991, 9:179-182.
    • (1991) Bio-Technology , vol.9 , pp. 179-182
    • Danhash, N.1    Gardner, D.C.J.2    Oliver, S.G.3
  • 22
    • 0029022831 scopus 로고
    • Genetic footprinting - A genomic strategy for determining a genes function given its sequence
    • Smith V, Botstein D, Brown PO: Genetic footprinting - a genomic strategy for determining a genes function given its sequence. Proc Natl Acad Sci USA 1995, 92:6479-6483.
    • (1995) Proc Natl Acad Sci USA , vol.92 , pp. 6479-6483
    • Smith, V.1    Botstein, D.2    Brown, P.O.3
  • 23
    • 0030450059 scopus 로고    scopus 로고
    • Functional analysis of the genes of yeast chromosome V by genetic footprinting
    • Smith V, Chou KN, Lashkari D, Botstein D, Brown PO: Functional analysis of the genes of yeast chromosome V by genetic footprinting. Science 1996, 274:2069-2074. A paper that illustrates the power of quantitative analyses (here, by following the competition between different Ty-induced yeast mutants under a variety of conditions) not only in revealing phenotypes associated with novel genes but also in providing a new perspective on the cellular role of genes of established function.
    • (1996) Science , vol.274 , pp. 2069-2074
    • Smith, V.1    Chou, K.N.2    Lashkari, D.3    Botstein, D.4    Brown, P.O.5
  • 24
    • 0343834097 scopus 로고    scopus 로고
    • Metabolic Control Analysis as a tool in the elucidation of the function of novel genes
    • Edited by Tuite MF, Brown AJ. London: Academic Press; in press
    • Teusink B, Baganz F, Westerhoff HV, Oliver SG: Metabolic Control Analysis as a tool in the elucidation of the function of novel genes. In Methods in Microbiology: Yeast Gene Analysis. Edited by Tuite MF, Brown AJ. London: Academic Press; 1997, in press. An explanation of MCA aimed at an audience of molecular biologists. Worked examples of the use of the approach in functional analysis are provided.
    • (1997) Methods in Microbiology: Yeast Gene Analysis
    • Teusink, B.1    Baganz, F.2    Westerhoff, H.V.3    Oliver, S.G.4
  • 25
    • 0029884590 scopus 로고    scopus 로고
    • How to recognize monofunctional units in a metabolic system
    • Rohwer JM, Schuster S, Westerhoff HV: How to recognize monofunctional units in a metabolic system. J Theor Biol 1996, 179:213-228.
    • (1996) J Theor Biol , vol.179 , pp. 213-228
    • Rohwer, J.M.1    Schuster, S.2    Westerhoff, H.V.3
  • 26
    • 0003087415 scopus 로고    scopus 로고
    • What can infrared spectroscopy tell us about the structure and composition of intact bacterial cells?
    • Edited by Mantsch HH, Chapman D. New York: Wiley-Liss
    • Naumann D, Schultz C, Helm D: What can infrared spectroscopy tell us about the structure and composition of intact bacterial cells? In Infrared Spectroscopy of Biomolecules. Edited by Mantsch HH, Chapman D. New York: Wiley-Liss; 1996:279-310.
    • (1996) Infrared Spectroscopy of Biomolecules , pp. 279-310
    • Naumann, D.1    Schultz, C.2    Helm, D.3
  • 27
    • 0030199890 scopus 로고    scopus 로고
    • Rapid identification of Streptococcus and Enterococcus species using diffuse reflectance-absorbency fourier-transform infrared-spectroscopy and artificial neural networks
    • Goodacre R, Timmins EM, Rooney PJ, Rowland JJ, Kell DB: Rapid identification of Streptococcus and Enterococcus species using diffuse reflectance-absorbency fourier-transform infrared-spectroscopy and artificial neural networks. FEMS Microbiol Letts 1996, 140:233-239. The first example of the use of diffuse reflectance IR to analyze whole microbial cells. Principal component analysis, aided by artificial neural networks, is used to establish a chemometric system that permits the identification of different bacterial species using this non-invasive analytical method.
    • (1996) FEMS Microbiol Letts , vol.140 , pp. 233-239
    • Goodacre, R.1    Timmins, E.M.2    Rooney, P.J.3    Rowland, J.J.4    Kell, D.B.5
  • 28
    • 0029121111 scopus 로고
    • Diagnosis of inborn errors of metabolism from bloodspots by acylcarnitines and amino acids profiling using automated tandem mass spectrometry
    • Rashed MS, Oznand PT, Bucknall MP, Little D: Diagnosis of inborn errors of metabolism from bloodspots by acylcarnitines and amino acids profiling using automated tandem mass spectrometry. Pediatr Res 1995, 38:324-331.
    • (1995) Pediatr Res , vol.38 , pp. 324-331
    • Rashed, M.S.1    Oznand, P.T.2    Bucknall, M.P.3    Little, D.4
  • 31
    • 0026674886 scopus 로고
    • Differential display of eukaryotic messenger RNA by means of the polymerase chain reaction
    • Liang P, Pardee AB: Differential display of eukaryotic messenger RNA by means of the polymerase chain reaction. Science 1992, 257:967-971.
    • (1992) Science , vol.257 , pp. 967-971
    • Liang, P.1    Pardee, A.B.2
  • 33
    • 0028867670 scopus 로고
    • Compilation and characteristics of dedicated transcription factors in Saccharomyces cerevisiae
    • Svetlov W, Cooper TG: Compilation and characteristics of dedicated transcription factors in Saccharomyces cerevisiae. Yeast 1995, 11:1439-1485.
    • (1995) Yeast , vol.11 , pp. 1439-1485
    • Svetlov, W.1    Cooper, T.G.2
  • 34
    • 0027940725 scopus 로고
    • A genetic screen to isolate genes regulated by the yeast CCAAT-box binding protein HAP2p
    • Dang VD, Valens M, Bolotin-Fukuhara M, Daignan-Fornier B: A genetic screen to isolate genes regulated by the yeast CCAAT-box binding protein HAP2p. Yeast 1994, 10:1273-1283.
    • (1994) Yeast , vol.10 , pp. 1273-1283
    • Dang, V.D.1    Valens, M.2    Bolotin-Fukuhara, M.3    Daignan-Fornier, B.4
  • 36
    • 0029972156 scopus 로고    scopus 로고
    • Identification of proteins of the yeast protein map using genetically manipulated strains and peptide-mass fingerprinting
    • Sagliocco F, Guillemot J, Monribot C, Capdevielle M, Perrot M, Ferran E, Ferrara P, Boucherie H: Identification of proteins of the yeast protein map using genetically manipulated strains and peptide-mass fingerprinting. Yeast 1996, 12:1519-1534.
    • (1996) Yeast , vol.12 , pp. 1519-1534
    • Sagliocco, F.1    Guillemot, J.2    Monribot, C.3    Capdevielle, M.4    Perrot, M.5    Ferran, E.6    Ferrara, P.7    Boucherie, H.8
  • 37
    • 10544244161 scopus 로고    scopus 로고
    • Linking genome and proteome by mass spectrometry - Large-scale identification of yeast proteins from 2-dimensional gels
    • Shevchenko A, Jensen ON, Podtelejnikov AV, Sagliocco F, Wilm M, Vorm O, Mortensen P, Shevchenko A, Boucherie H, Mann M: Linking genome and proteome by mass spectrometry - large-scale identification of yeast proteins from 2-dimensional gels. Proc Natl Acad Sci USA 1996, 93:14440-14445. The coming-of-age of the two-dimensional gel approach for the analysis of an organism's complete protein set (proteome). This paper demonstrates the power of using mass spectrometry, combined with the information of a complete genome sequence, in protein identification.
    • (1996) Proc Natl Acad Sci USA , vol.93 , pp. 14440-14445
    • Shevchenko, A.1    Jensen, O.N.2    Podtelejnikov, A.V.3    Sagliocco, F.4    Wilm, M.5    Vorm, O.6    Mortensen, P.7    Shevchenko, A.8    Boucherie, H.9    Mann, M.10
  • 38
    • 0001408720 scopus 로고
    • Internal peptide sequence of protein digested in-gel after one- or two-dimensional gel elctrophoresis
    • Ferrara P, Rosenfeld J, Guillemot JC, Capdeville J: Internal peptide sequence of protein digested in-gel after one- or two-dimensional gel elctrophoresis. Tech Protein Chem 1994, 4:379-387.
    • (1994) Tech Protein Chem , vol.4 , pp. 379-387
    • Ferrara, P.1    Rosenfeld, J.2    Guillemot, J.C.3    Capdeville, J.4
  • 39
    • 0030026070 scopus 로고    scopus 로고
    • Femtomole sequencing of proteins from polyacrylamide gels by nano-electrospray mass spectrometry
    • Wilm M, Shevchenko S, Houthaeve T, Brei D, Schweigerer L, Fotsis T, Mann M: Femtomole sequencing of proteins from polyacrylamide gels by nano-electrospray mass spectrometry. Nature 1996, 379:466-469.
    • (1996) Nature , vol.379 , pp. 466-469
    • Wilm, M.1    Shevchenko, S.2    Houthaeve, T.3    Brei, D.4    Schweigerer, L.5    Fotsis, T.6    Mann, M.7
  • 40
    • 0030045605 scopus 로고    scopus 로고
    • A protein linkage map of Escherichia coli bacteriophage T7
    • Bartel PL, Roecklein JA, SenGupta D, Fields S: A protein linkage map of Escherichia coli bacteriophage T7. Nat Genet 1996, 12:72-77.
    • (1996) Nat Genet , vol.12 , pp. 72-77
    • Bartel, P.L.1    Roecklein, J.A.2    Sengupta, D.3    Fields, S.4
  • 41
    • 0030747938 scopus 로고    scopus 로고
    • Human genetic diseases: A cross-talk between man and yeast
    • in press
    • Foury F: Human genetic diseases: a cross-talk between man and yeast. Gene 1997, in press.
    • (1997) Gene
    • Foury, F.1
  • 42
    • 0025213981 scopus 로고
    • Cloning of three human multifunctional de novo purine biosynthetic genes by functional complementation of yeast mutations
    • Schild D, Brake AJ, Kiefer MC, Young D, Barr PC: Cloning of three human multifunctional de novo purine biosynthetic genes by functional complementation of yeast mutations. Proc Natl Acad Sci USA 1990, 87:2916-2920.
    • (1990) Proc Natl Acad Sci USA , vol.87 , pp. 2916-2920
    • Schild, D.1    Brake, A.J.2    Kiefer, M.C.3    Young, D.4    Barr, P.C.5
  • 43
    • 0027431477 scopus 로고
    • Cloning of the human homolog of the CDC34 cell cycle gene by complementation in yeast
    • Plon SE, Leppig KA, Do H-N, Groudine M: Cloning of the human homolog of the CDC34 cell cycle gene by complementation in yeast. Proc Natl Acad Sci USA 1993, 90:10484-10488.
    • (1993) Proc Natl Acad Sci USA , vol.90 , pp. 10484-10488
    • Plon, S.E.1    Leppig, K.A.2    Do, H.-N.3    Groudine, M.4
  • 44
    • 0027531831 scopus 로고
    • Isolation of human glycogen branching enzyme cDNAs by screening complementation in yeast
    • Thon VJ, Khalil M, Cannon JF: Isolation of human glycogen branching enzyme cDNAs by screening complementation in yeast. J Biol Chem 1993, 268:7509-7513.
    • (1993) J Biol Chem , vol.268 , pp. 7509-7513
    • Thon, V.J.1    Khalil, M.2    Cannon, J.F.3
  • 45
    • 0028038276 scopus 로고
    • Isolation of a human cDNA for heme A: Farnesyltransferase by functional complementation of a yeast cox10 mutant
    • Glerum DM, Tzagaloff A: Isolation of a human cDNA for heme A: farnesyltransferase by functional complementation of a yeast cox10 mutant. Proc Natl Acad Sci USA 1994, 91:8452-8456.
    • (1994) Proc Natl Acad Sci USA , vol.91 , pp. 8452-8456
    • Glerum, D.M.1    Tzagaloff, A.2
  • 46
    • 0029047328 scopus 로고
    • Functional complementation of the ste6 gene of Saccharomyces cerevisiae with the pfmdr1 gene of Plasmodium falciparum
    • Volkman SK, Cowman AF, Wirth DF: Functional complementation of the ste6 gene of Saccharomyces cerevisiae with the pfmdr1 gene of Plasmodium falciparum. Proc Natl Acad Sci USA 1990, 92:8921-8925.
    • (1990) Proc Natl Acad Sci USA , vol.92 , pp. 8921-8925
    • Volkman, S.K.1    Cowman, A.F.2    Wirth, D.F.3
  • 47
    • 0031002773 scopus 로고    scopus 로고
    • Analysis in yeast of antimalarial drugs that target the dihydrofolate reductase of Plasmodium falciparum
    • Wooden JM, Hartwell LH, Vazquez B, Sibley CH: Analysis in yeast of antimalarial drugs that target the dihydrofolate reductase of Plasmodium falciparum. Mol Biochem Parasitol 1997, 85:25-40. This paper not only shows that lesions in the yeast genome may be complemented by coding sequences from the malaria parasite, Plasmodium falciparum, but also demonstrates that the recombinant yeast expressing a parasite protein (in this case, dihydrofolate reductase) can be used to screen for anti-malarial drugs.
    • (1997) Mol Biochem Parasitol , vol.85 , pp. 25-40
    • Wooden, J.M.1    Hartwell, L.H.2    Vazquez, B.3    Sibley, C.H.4
  • 48
    • 0025153120 scopus 로고
    • Control of yeast mating signal transduction by a mammalian β-2-adrenergic receptor and GSα subunit
    • King K, Dohlman HG, Thorner J, Caron MG, Lefkowitz RJ: Control of yeast mating signal transduction by a mammalian β-2-adrenergic receptor and GSα subunit. Science 1990, 250:121-123.
    • (1990) Science , vol.250 , pp. 121-123
    • King, K.1    Dohlman, H.G.2    Thorner, J.3    Caron, M.G.4    Lefkowitz, R.J.5
  • 49
    • 0028840683 scopus 로고
    • Functional coupling of a mammalian somatostatin receptor to the yeast pheromone response pathway
    • Price LA, Kajkowski EM, Hadcock JR, Ozenberger BA, Pausch MH: Functional coupling of a mammalian somatostatin receptor to the yeast pheromone response pathway. Mol Cell Biol 1995, 15:6188-6195. A technical tour de force which should stimulate renewed interest in the use of smart yeast screens in drug discovery. The use of chimeric proteins to establish effective coupling of a membrane receptor protein to a yeast reporter system will, it is hoped, provide a general strategy that may be successfully employed in the design of a wide range of such systems.
    • (1995) Mol Cell Biol , vol.15 , pp. 6188-6195
    • Price, L.A.1    Kajkowski, E.M.2    Hadcock, J.R.3    Ozenberger, B.A.4    Pausch, M.H.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.