-
1
-
-
0028239805
-
Crystal structure of unmodified tRNA(Gln) complexed with glutaminyl-tRNA synthetase and ATP suggests a possible role for pseudo-uridines in stabilization of RNA structure
-
Arnez, J.G. and Steitz, T.A. 1994. Crystal structure of unmodified tRNA(Gln) complexed with glutaminyl-tRNA synthetase and ATP suggests a possible role for pseudo-uridines in stabilization of RNA structure. Biochemistry 33: 7560-7567.
-
(1994)
Biochemistry
, vol.33
, pp. 7560-7567
-
-
Arnez, J.G.1
Steitz, T.A.2
-
2
-
-
0027459936
-
Small nuclear ribonucleoprotein (RNP) U2 contains numerous additional proteins and has a bipartite RNP structure under splicing conditions
-
Behrens, S.E., Tyc, K., Kastner, B., Reichelt, J., and Lührmann, R. 1993. Small nuclear ribonucleoprotein (RNP) U2 contains numerous additional proteins and has a bipartite RNP structure under splicing conditions. Mol. Cell. Biol. 13: 307-319.
-
(1993)
Mol. Cell. Biol.
, vol.13
, pp. 307-319
-
-
Behrens, S.E.1
Tyc, K.2
Kastner, B.3
Reichelt, J.4
Lührmann, R.5
-
3
-
-
0001468848
-
Splicing of precursors to mRNA by the spliceosome
-
(eds. R.F. Gesteland et al.). Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY
-
Burge, C.B., Tuschl, T., and Sharp, P.A. 1999. Splicing of precursors to mRNA by the spliceosome. In The RNA world (eds. R.F. Gesteland et al.), pp 525-560. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
-
(1999)
The RNA World
, pp. 525-560
-
-
Burge, C.B.1
Tuschl, T.2
Sharp, P.A.3
-
4
-
-
0033935223
-
Pseudouridine in RNA: What, where, how, and why
-
Charette, M. and Gray, M.W. 2000. Pseudouridine in RNA: What, where, how, and why. IUBMB Life 49: 341-351.
-
(2000)
IUBMB Life
, vol.49
, pp. 341-351
-
-
Charette, M.1
Gray, M.W.2
-
5
-
-
0032708815
-
Resolution of the mammalian E complex and the ATP-dependent spliceosomal complexes on native agarose mini-gels
-
Das, R. and Reed, R. 1999. Resolution of the mammalian E complex and the ATP-dependent spliceosomal complexes on native agarose mini-gels. RNA 5: 1504-1508.
-
(1999)
RNA
, vol.5
, pp. 1504-1508
-
-
Das, R.1
Reed, R.2
-
6
-
-
0032880119
-
Characterization of a protein complex containing spliceosomal proteins SAPs 49, 130, 145, and 155
-
Das, B.K., Xia, L., Palandjian, L., Gozani, O., Chyung, Y., and Reed, R. 1999. Characterization of a protein complex containing spliceosomal proteins SAPs 49, 130, 145, and 155. Mol. Cell. Biol. 19: 6796-6802.
-
(1999)
Mol. Cell. Biol.
, vol.19
, pp. 6796-6802
-
-
Das, B.K.1
Xia, L.2
Palandjian, L.3
Gozani, O.4
Chyung, Y.5
Reed, R.6
-
7
-
-
0033636518
-
Functional association of U2 snRNP with the ATP-independent spliceosomal complex E
-
Das, R., Zhou, Z., and Reed, R. 2000. Functional association of U2 snRNP with the ATP-independent spliceosomal complex E. Mol. Cell 5: 779-787.
-
(2000)
Mol. Cell
, vol.5
, pp. 779-787
-
-
Das, R.1
Zhou, Z.2
Reed, R.3
-
8
-
-
0002841715
-
Biophysical and conformational properties of modified nucleosides in RNA (Nuclear Magnetic Resonance studies)
-
(eds. H. Grosjean and R. Benne). ASM Press, Washington, DC
-
Davies, D.R. 1998. Biophysical and conformational properties of modified nucleosides in RNA (Nuclear Magnetic Resonance studies). In Modification and editing of RNA (eds. H. Grosjean and R. Benne), pp 85-102. ASM Press, Washington, DC.
-
(1998)
Modification and Editing of RNA
, pp. 85-102
-
-
Davies, D.R.1
-
9
-
-
0021100690
-
Accurate transcription initiation by RNA polymerase II in a soluble extract from isolated mammalian nuclei
-
Dignam, J.D., Lebovitz, R.M., and Roeder, R.G. 1983. Accurate transcription initiation by RNA polymerase II in a soluble extract from isolated mammalian nuclei. Nucleic Acids Res. 11: 1475-1489.
-
(1983)
Nucleic Acids Res.
, vol.11
, pp. 1475-1489
-
-
Dignam, J.D.1
Lebovitz, R.M.2
Roeder, R.G.3
-
10
-
-
0018120558
-
3′-terminal labeling of RNA with T4 RNA ligase
-
England, I.E. and Uhlenbeck, O.C. 1978. 3′-terminal labeling of RNA with T4 RNA ligase. Nature 275: 560-561.
-
(1978)
Nature
, vol.275
, pp. 560-561
-
-
England, I.E.1
Uhlenbeck, O.C.2
-
11
-
-
0024999077
-
An essential signaling role for the m3G cap in the transport of U1 snRNP to the nucleus
-
Fischer, U. and Lührmann, R. 1990. An essential signaling role for the m3G cap in the transport of U1 snRNP to the nucleus. Science 249: 786-790.
-
(1990)
Science
, vol.249
, pp. 786-790
-
-
Fischer, U.1
Lührmann, R.2
-
12
-
-
0030044836
-
Evidence that sequence-independent binding of highly conserved U2 snRNP proteins upstream of the branch site is required for assembly of spliceosomal complex A
-
Gozani, O., Feld, R., and Reed, R. 1996. Evidence that sequence-independent binding of highly conserved U2 snRNP proteins upstream of the branch site is required for assembly of spliceosomal complex A. Genes & Dev. 10: 233-243.
-
(1996)
Genes & Dev.
, vol.10
, pp. 233-243
-
-
Gozani, O.1
Feld, R.2
Reed, R.3
-
13
-
-
0029903805
-
In vitro complementation analysis localizes 23S rRNA posttranscriptional modifications that are required for Escherichia coli 50S ribosomal subunit assembly and function
-
Green, R. and Noller, H.F. 1996. In vitro complementation analysis localizes 23S rRNA posttranscriptional modifications that are required for Escherichia coli 50S ribosomal subunit assembly and function. RNA 2: 1011-1021.
-
(1996)
RNA
, vol.2
, pp. 1011-1021
-
-
Green, R.1
Noller, H.F.2
-
14
-
-
0029904017
-
Localization of modified nucleotides in Schizosaccharomyces pombe spliceosomal small nuclear RNAs: Modified nucleotides are clustered in functionally important regions
-
Gu, J., Patton, J.R., Shimba, S., and Reddy, R. 1996. Localization of modified nucleotides in Schizosaccharomyces pombe spliceosomal small nuclear RNAs: Modified nucleotides are clustered in functionally important regions. RNA 2: 909-918.
-
(1996)
RNA
, vol.2
, pp. 909-918
-
-
Gu, J.1
Patton, J.R.2
Shimba, S.3
Reddy, R.4
-
15
-
-
0024466269
-
Mapping of B cell epitopes on small nuclear ribonucleoproteins that react with human autoantibodies as well as with experimentally-induced mouse monoclonal antibodies
-
Habets, W.J., Hoet, M.H., De Jong, B.A., Van der Kemp, A., and Van Venrooij, W.J. 1989. Mapping of B cell epitopes on small nuclear ribonucleoproteins that react with human autoantibodies as well as with experimentally-induced mouse monoclonal antibodies. J. Immunol. 143: 2560-2566.
-
(1989)
J. Immunol.
, vol.143
, pp. 2560-2566
-
-
Habets, W.J.1
Hoet, M.H.2
De Jong, B.A.3
Van Der Kemp, A.4
Van Venrooij, W.J.5
-
16
-
-
0025007910
-
The trimethylguanosine cap structure of U1 snRNA is a component of a bipartite nuclear targeting signal
-
Hamm, J., Darzynkiewicz, E., Tahara, S.M., and Mattaj, I.W. 1990. The trimethylguanosine cap structure of U1 snRNA is a component of a bipartite nuclear targeting signal. Cell 62: 569-577.
-
(1990)
Cell
, vol.62
, pp. 569-577
-
-
Hamm, J.1
Darzynkiewicz, E.2
Tahara, S.M.3
Mattaj, I.W.4
-
17
-
-
0037168541
-
Protein composition of human prespliceosomes isolated by a tobramycin affinity-selection method
-
Hartmuth, K., Urlaub, H., Vornlocher, H.-P., Will, C.L., Gentzel, M., Wilm, M., and Lührmann, R. 2002. Protein composition of human prespliceosomes isolated by a tobramycin affinity-selection method. Proc. Natl. Acad. Sci. 99: 16719-16724.
-
(2002)
Proc. Natl. Acad. Sci.
, vol.99
, pp. 16719-16724
-
-
Hartmuth, K.1
Urlaub, H.2
Vornlocher, H.-P.3
Will, C.L.4
Gentzel, M.5
Wilm, M.6
Lührmann, R.7
-
18
-
-
0027331556
-
Modified nucleotides of tRNA(3Lys) modulate primer/template loop-loop interaction in the initiation complex of HIV-1 reverse transcription
-
Isel, C., Marquet, R., Keith, G., Ehresmann, C., and Ehresmann, B. 1993. Modified nucleotides of tRNA(3Lys) modulate primer/template loop-loop interaction in the initiation complex of HIV-1 reverse transcription. J. Biol. Chem. 268: 25269-25272.
-
(1993)
J. Biol. Chem.
, vol.268
, pp. 25269-25272
-
-
Isel, C.1
Marquet, R.2
Keith, G.3
Ehresmann, C.4
Ehresmann, B.5
-
19
-
-
0030019943
-
Specific initiation and switch to elongation of human immunodeficiency virus type 1 reverse transcription require the post-transcriptional modifications of primer tRNA3Lys
-
Isel, C., Lanchy, J.M., Le Grice, S.F., Ehresmann, C., Ehresmann, B., and Marquet, R. 1996. Specific initiation and switch to elongation of human immunodeficiency virus type 1 reverse transcription require the post-transcriptional modifications of primer tRNA3Lys. EMBO J. 15: 917-924.
-
(1996)
EMBO J.
, vol.15
, pp. 917-924
-
-
Isel, C.1
Lanchy, J.M.2
Le Grice, S.F.3
Ehresmann, C.4
Ehresmann, B.5
Marquet, R.6
-
20
-
-
0027509065
-
U2 small nuclear RNA 3′ end formation is directed by a critical internal structure distinct from the processing site
-
Jacobson, M.R., Rhoadhouse, M., and Pederson, T. 1993. U2 small nuclear RNA 3′ end formation is directed by a critical internal structure distinct from the processing site. Mol. Cell. Biol. 13: 1119-1129.
-
(1993)
Mol. Cell. Biol.
, vol.13
, pp. 1119-1129
-
-
Jacobson, M.R.1
Rhoadhouse, M.2
Pederson, T.3
-
21
-
-
0344080588
-
Modification of Sm small nuclear RNAs occurs in the nucleoplasmic Cajal body following import from the cytoplasm
-
Jády, B.E., Darzacq, X., Tucker, K.E., Matera, A.G., Bertrand, E., and Kiss, T. 2003. Modification of Sm small nuclear RNAs occurs in the nucleoplasmic Cajal body following import from the cytoplasm. EMBO J. 22: 1878-1888.
-
(2003)
EMBO J.
, vol.22
, pp. 1878-1888
-
-
Jády, B.E.1
Darzacq, X.2
Tucker, K.E.3
Matera, A.G.4
Bertrand, E.5
Kiss, T.6
-
22
-
-
0037292453
-
Ribosome structure and activity are altered in cells lacking snoRNPs that form pseudouridines in the peptidyl transferase center
-
King, T.H., Liu, B., McCully, R.R., and Fournier, M.J. 2003. Ribosome structure and activity are altered in cells lacking snoRNPs that form pseudouridines in the peptidyl transferase center. Mol. Cell 11: 425-135.
-
(2003)
Mol. Cell
, vol.11
, pp. 425-135
-
-
King, T.H.1
Liu, B.2
McCully, R.R.3
Fournier, M.J.4
-
23
-
-
0029891101
-
The structure and function of proteins involved in mammalian pre-mRNA splicing
-
Krämer, A. 1996. The structure and function of proteins involved in mammalian pre-mRNA splicing. Annu. Rev. Biochem. 65: 367-409.
-
(1996)
Annu. Rev. Biochem.
, vol.65
, pp. 367-409
-
-
Krämer, A.1
-
24
-
-
0033612569
-
Combined biochemical and electron microscopic analyses reveal the architecture of the mammalian U2 snRNP
-
Krämer, A., Gruter, P., Groning, K., and Kastner, B. 1999. Combined biochemical and electron microscopic analyses reveal the architecture of the mammalian U2 snRNP. J. Cell Biol. 145: 1355-1368.
-
(1999)
J. Cell Biol.
, vol.145
, pp. 1355-1368
-
-
Krämer, A.1
Gruter, P.2
Groning, K.3
Kastner, B.4
-
25
-
-
0029617911
-
Cytoplasmic 3′ poly(A) addition induces 5′ cap ribose methylation: Implications for translational control of maternal mRNA
-
Kuge, H. and Richter, J.D. 1995. Cytoplasmic 3′ poly(A) addition induces 5′ cap ribose methylation: Implications for translational control of maternal mRNA. EMBO J. 14: 6301-6310.
-
(1995)
EMBO J.
, vol.14
, pp. 6301-6310
-
-
Kuge, H.1
Richter, J.D.2
-
26
-
-
0032126521
-
Cap ribose methylation of c-mos mRNA stimulates translation and oocyte maturation in Xenopus laevis
-
Kuge, H., Brownlee, G.G., Gershon, P.D., and Richter, J.D. 1998. Cap ribose methylation of c-mos mRNA stimulates translation and oocyte maturation in Xenopus laevis. Nucleic Acids Res. 26: 3208-3214.
-
(1998)
Nucleic Acids Res.
, vol.26
, pp. 3208-3214
-
-
Kuge, H.1
Brownlee, G.G.2
Gershon, P.D.3
Richter, J.D.4
-
27
-
-
0000341684
-
Antibodies to small nuclear RNAs complexed with proteins are produced by patients with systemic lupus erythematosus
-
Lerner, M.R. and Steitz, J.A. 1979. Antibodies to small nuclear RNAs complexed with proteins are produced by patients with systemic lupus erythematosus. Proc. Natl. Acad. Sci. 76: 5495-5499.
-
(1979)
Proc. Natl. Acad. Sci.
, vol.76
, pp. 5495-5499
-
-
Lerner, M.R.1
Steitz, J.A.2
-
28
-
-
0033634673
-
Functional recognition of 5′ splice site by U4/U6.U5 tri-snRNP defines a novel ATP-dependent step in early spliceosome assembly
-
Maroney, P.A., Romfo, C.M., and Nilsen, T.W. 2000. Functional recognition of 5′ splice site by U4/U6.U5 tri-snRNP defines a novel ATP-dependent step in early spliceosome assembly. Mol. Cell 6: 317-328.
-
(2000)
Mol. Cell
, vol.6
, pp. 317-328
-
-
Maroney, P.A.1
Romfo, C.M.2
Nilsen, T.W.3
-
29
-
-
0035735484
-
A multiprotein complex mediates the ATP-dependent assembly of spliceosomal U snRNPs
-
Meister, G., Buhler, D., Pillai, R., Lottspeich F., and Fischer, U. 2001. A multiprotein complex mediates the ATP-dependent assembly of spliceosomal U snRNPs. Nat. Cell. Biol. 3: 945-949.
-
(2001)
Nat. Cell. Biol.
, vol.3
, pp. 945-949
-
-
Meister, G.1
Buhler, D.2
Pillai, R.3
Lottspeich, F.4
Fischer, U.5
-
30
-
-
0034657608
-
Unique structural and stabilizing roles for the individual pseudouridine residues in the 1920 region of Escherichia coli 23S rRNA
-
Meroueh, M., Grohar, P.J., Qiu, J., SantaLucia Jr., J., Scaringe, S.A., and Chow, C.S. 2000. Unique structural and stabilizing roles for the individual pseudouridine residues in the 1920 region of Escherichia coli 23S rRNA. Nucleic Acids Res. 28: 2075-2083.
-
(2000)
Nucleic Acids Res.
, vol.28
, pp. 2075-2083
-
-
Meroueh, M.1
Grohar, P.J.2
Qiu, J.3
SantaLucia Jr., J.4
Scaringe, S.A.5
Chow, C.S.6
-
31
-
-
0024819449
-
Synthesis of small RNAs using T7 RNA polymerase
-
Milligan, J.F. and Uhlenbeck, O.C. 1989. Synthesis of small RNAs using T7 RNA polymerase. Methods Enzymol. 180: 51-62.
-
(1989)
Methods Enzymol.
, vol.180
, pp. 51-62
-
-
Milligan, J.F.1
Uhlenbeck, O.C.2
-
32
-
-
0026680843
-
Site-specific modification of pre-mRNA: The 2′-hydroxyl groups at the splice sites
-
Moore, M.J. and Sharp, P.A. 1992. Site-specific modification of pre-mRNA: The 2′-hydroxyl groups at the splice sites. Science 256: 992-997.
-
(1992)
Science
, vol.256
, pp. 992-997
-
-
Moore, M.J.1
Sharp, P.A.2
-
33
-
-
0024788786
-
U2 snRNA sequences that bind U2-specific proteins are dispensable for the function of U2 snRNP in splicing
-
Pan, Z.Q. and Prives, C. 1989. U2 snRNA sequences that bind U2-specific proteins are dispensable for the function of U2 snRNP in splicing. Genes & Dev. 3: 1887-1898.
-
(1989)
Genes & Dev.
, vol.3
, pp. 1887-1898
-
-
Pan, Z.Q.1
Prives, C.2
-
34
-
-
0000189848
-
Spliceosome assembly
-
(ed. A.R. Krainer). IRL Press, Oxford, UK
-
Reed, R. and Palandijan, L. 1997. Spliceosome assembly. In Eukaryotic mRNA processing (ed. A.R. Krainer), pp 103-129. IRL Press, Oxford, UK.
-
(1997)
Eukaryotic mRNA Processing
, pp. 103-129
-
-
Reed, R.1
Palandijan, L.2
-
35
-
-
0029124901
-
In vitro reconstitution of mammalian U2 and U5 snRNPs active in splicing: Sm proteins are functionally interchangeable and are essential for the formation of functional U2 and U5 snRNPs
-
Ségault, V., Will, C.L., Sproat, B.S., and Lührmann, R. 1995. In vitro reconstitution of mammalian U2 and U5 snRNPs active in splicing: Sm proteins are functionally interchangeable and are essential for the formation of functional U2 and U5 snRNPs. EMBO J. 14: 4010-4021.
-
(1995)
EMBO J.
, vol.14
, pp. 4010-4021
-
-
Ségault, V.1
Will, C.L.2
Sproat, B.S.3
Lührmann, R.4
-
36
-
-
0026582386
-
Reconstitution of functional mammalian U4 small nuclear ribonucleoprotein: Sm protein binding is not essential for splicing in vitro
-
Wersig, C. and Bindereif, A. 1992. Reconstitution of functional mammalian U4 small nuclear ribonucleoprotein: Sm protein binding is not essential for splicing in vitro. Mol. Cell. Biol. 12: 1460-1468.
-
(1992)
Mol. Cell. Biol.
, vol.12
, pp. 1460-1468
-
-
Wersig, C.1
Bindereif, A.2
-
37
-
-
0029847221
-
In vitro reconstitution of mammalian U1 snRNPs active in splicing: The U1-C protein enhances the formation of early (E) spliceosomal complexes
-
Will, C.L., Rümpler, S., Klein Gunnewiek, J., van Venrooij, W.J., and Lührmann, R. 1996. In vitro reconstitution of mammalian U1 snRNPs active in splicing: The U1-C protein enhances the formation of early (E) spliceosomal complexes. Nucleic Acids Res. 24: 4614-4623.
-
(1996)
Nucleic Acids Res.
, vol.24
, pp. 4614-4623
-
-
Will, C.L.1
Rümpler, S.2
Klein Gunnewiek, J.3
Van Venrooij, W.J.4
Lührmann, R.5
-
38
-
-
0035882161
-
A novel U2 and U11/U12 snRNP protein that associates with the pre-mRNA branch site
-
Will, C.L., Schneider, C, MacMillan, A.M., Katopodis, N.F., Neubauer, G., Wilm, M., Lührmann, R., and Query, C.C. 2001. A novel U2 and U11/U12 snRNP protein that associates with the pre-mRNA branch site. EMBO J. 20: 4536-4546.
-
(2001)
EMBO J.
, vol.20
, pp. 4536-4546
-
-
Will, C.L.1
Schneider, C.2
MacMillan, A.M.3
Katopodis, N.F.4
Neubauer, G.5
Wilm, M.6
Lührmann, R.7
Query, C.C.8
-
39
-
-
0037119975
-
Characterization of novel SF3b and 17S U2 snRNP proteins, including a human Prp5p homolog and an SF3b DEAD-box protein
-
Will, C.L., Urlaub, H., Achsel, T., Gentzel, M., Wilm, M., and Lührmann, R. 2002. Characterization of novel SF3b and 17S U2 snRNP proteins, including a human Prp5p homolog and an SF3b DEAD-box protein. EMBO J. 21: 4978-4988.
-
(2002)
EMBO J.
, vol.21
, pp. 4978-4988
-
-
Will, C.L.1
Urlaub, H.2
Achsel, T.3
Gentzel, M.4
Wilm, M.5
Lührmann, R.6
-
40
-
-
0026500367
-
Reconstituted mammalian U4/U6 snRNP complements splicing: A mutational analysis
-
Wolff, T. and Bindereif, A. 1992. Reconstituted mammalian U4/U6 snRNP complements splicing: A mutational analysis. EMBO J. 11:345-359.
-
(1992)
EMBO J.
, vol.11
, pp. 345-359
-
-
Wolff, T.1
Bindereif, A.2
-
41
-
-
0032189145
-
Modifications of U2 snRNA are required for snRNP assembly and pre-mRNA splicing
-
Yu, Y.T., Shu, M.D., and Steitz, J.A. 1998. Modifications of U2 snRNA are required for snRNP assembly and pre-mRNA splicing. EMBO J. 17: 5783-5795.
-
(1998)
EMBO J.
, vol.17
, pp. 5783-5795
-
-
Yu, Y.T.1
Shu, M.D.2
Steitz, J.A.3
-
42
-
-
1642447085
-
Pseudouridines in and near the branch site recognition region of U2 snRNA are required for snRNP biogenesis and pre-mRNA splicing in Xenopus oocytes
-
Zhao, X. and Yu, Y.T. 2004. Pseudouridines in and near the branch site recognition region of U2 snRNA are required for snRNP biogenesis and pre-mRNA splicing in Xenopus oocytes. RNA 10: 681-690.
-
(2004)
RNA
, vol.10
, pp. 681-690
-
-
Zhao, X.1
Yu, Y.T.2
|