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Volumn 343, Issue 1, 2004, Pages 99-106

Single-chain integration host factors as probes for high-precision nucleoprotein complex formation

Author keywords

DNA architectural protein; DNA bending; DNA replication; Integration host factor; Nucleoprotein complex; Protein engineering; Site specific recombination

Indexed keywords

AMINO ACID; INTEGRASE; INTEGRATION HOST FACTOR; MONOMER; NUCLEOPROTEIN; POLYPEPTIDE;

EID: 9244243059     PISSN: 03781119     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.gene.2004.08.030     Document Type: Article
Times cited : (7)

References (22)
  • 1
    • 0001931646 scopus 로고    scopus 로고
    • λ Int and the λ Int family
    • N.L. Craig R. Craigie A. M. Lambowitz ASM Press Washington, DC
    • M.A. Azaro, and A. Landy λ Int and the λ Int family N.L. Craig R. Craigie A. M. Lambowitz Mobile DNA II 2002 ASM Press Washington, DC 118 148
    • (2002) Mobile DNA II , pp. 118-148
    • Azaro, M.A.1    Landy, A.2
  • 3
    • 0345518010 scopus 로고    scopus 로고
    • Alterations in the directionality of lambda site-specific recombination catalyzed by mutant integrases in vivo
    • N. Christ, and P. Dröge Alterations in the directionality of lambda site-specific recombination catalyzed by mutant integrases in vivo J. Mol. Biol. 288 1999 825 836
    • (1999) J. Mol. Biol. , vol.288 , pp. 825-836
    • Christ, N.1    Dröge, P.2
  • 4
    • 0036202935 scopus 로고    scopus 로고
    • Genetic manipulation of mouse embryonic stem cells by mutant lambda integrases
    • N. Christ, and P. Dröge Genetic manipulation of mouse embryonic stem cells by mutant lambda integrases Genesis 32 2002 203 208
    • (2002) Genesis , vol.32 , pp. 203-208
    • Christ, N.1    Dröge, P.2
  • 5
    • 0344012228 scopus 로고    scopus 로고
    • Activation of site-specific integration in human cells by a single chain integration host factor
    • T. Corona, Q. Bao, N. Christ, T. Schwartz, J. Li, and P. Dröge Activation of site-specific integration in human cells by a single chain integration host factor Nucleic Acids Res. 31 2003 5140 5148
    • (2003) Nucleic Acids Res. , vol.31 , pp. 5140-5148
    • Corona, T.1    Bao, Q.2    Christ, N.3    Schwartz, T.4    Li, J.5    Dröge, P.6
  • 6
    • 0036304119 scopus 로고    scopus 로고
    • Concerted binding and bending of DNA by E. coli integration host factor
    • G.M. Dhavan, D.M. Crothers, M.R. Chance, and M. Brenowitz Concerted binding and bending of DNA by E. coli integration host factor J. Mol. Biol. 315 2002 1027 1037
    • (2002) J. Mol. Biol. , vol.315 , pp. 1027-1037
    • Dhavan, G.M.1    Crothers, D.M.2    Chance, M.R.3    Brenowitz, M.4
  • 7
    • 0022501136 scopus 로고
    • Multiple DNA-protein interactions governing high-precision DNA transactions
    • H. Echols Multiple DNA-protein interactions governing high-precision DNA transactions Science 233 1986 1050 1056
    • (1986) Science , vol.233 , pp. 1050-1056
    • Echols, H.1
  • 8
    • 0025148348 scopus 로고
    • Nucleoprotein structures initiating DNA replication, transcription, and site-specific recombination
    • H. Echols Nucleoprotein structures initiating DNA replication, transcription, and site-specific recombination J. Biol. Chem. 265 1990 14697 14700
    • (1990) J. Biol. Chem. , vol.265 , pp. 14697-14700
    • Echols, H.1
  • 9
    • 0031568786 scopus 로고    scopus 로고
    • A good turn for DNA: The structure of integration host factor bound to DNA
    • T. Ellenberger, and A. Landy A good turn for DNA: the structure of integration host factor bound to DNA Structure 5 1997 153 157
    • (1997) Structure , vol.5 , pp. 153-157
    • Ellenberger, T.1    Landy, A.2
  • 11
    • 0025180835 scopus 로고
    • Searching for and predicting the activity of sites for DNA binding proteins: Compilation and analysis of the binding sites for Escherichia coli integration host factor (IHF)
    • J.A. Goodrich, M.L. Schwartz, and W.R. McClure Searching for and predicting the activity of sites for DNA binding proteins: compilation and analysis of the binding sites for Escherichia coli integration host factor (IHF) Nucleic Acids Res. 18 1990 4993 5000
    • (1990) Nucleic Acids Res. , vol.18 , pp. 4993-5000
    • Goodrich, J.A.1    Schwartz, M.L.2    McClure, W.R.3
  • 12
    • 0028922082 scopus 로고
    • The regulation of transcription initiation by integration host factor
    • N. Goosen, and P. van de Putte The regulation of transcription initiation by integration host factor Mol. Microbiol. 16 1995 1 7
    • (1995) Mol. Microbiol. , vol.16 , pp. 1-7
    • Goosen, N.1    Van De Putte, P.2
  • 13
    • 0019833645 scopus 로고
    • Specific-purpose plasmid cloning vectors: I. Low copy number, temperature-sensitive, mobilization-defective pSC101-derived containment vectors
    • T. Hashimoto-Gotoh, F.C. Franklin, A. Nordheim, and K.N. Timmis Specific-purpose plasmid cloning vectors: I. Low copy number, temperature-sensitive, mobilization-defective pSC101-derived containment vectors Gene 16 1981 227 235
    • (1981) Gene , vol.16 , pp. 227-235
    • Hashimoto-Gotoh, T.1    Franklin, F.C.2    Nordheim, A.3    Timmis, K.N.4
  • 14
    • 0035816212 scopus 로고    scopus 로고
    • Specific and non-specific interactions of integration host factor with DNA: Thermodynamic evidence for disruption of multiple IHF surface salt-bridges coupled to DNA binding
    • J.A. Holbrook, O.V. Tsodikov, R.M. Saecker, and M.T. Record Jr. Specific and non-specific interactions of integration host factor with DNA: thermodynamic evidence for disruption of multiple IHF surface salt-bridges coupled to DNA binding J. Mol. Biol. 310 2001 379 401
    • (2001) J. Mol. Biol. , vol.310 , pp. 379-401
    • Holbrook, J.A.1    Tsodikov, O.V.2    Saecker, R.M.3    Record Jr., M.T.4
  • 15
    • 0038047138 scopus 로고    scopus 로고
    • Integration host factor: Putting a twist on protein-DNA recognition
    • T.W. Lynch, E.K. Read, A.N. Mattis, J.F. Gardner, and P.A. Rice Integration host factor: putting a twist on protein-DNA recognition J. Mol. Biol. 330 2003 493 502
    • (2003) J. Mol. Biol. , vol.330 , pp. 493-502
    • Lynch, T.W.1    Read, E.K.2    Mattis, A.N.3    Gardner, J.F.4    Rice, P.A.5
  • 16
    • 0002480960 scopus 로고    scopus 로고
    • The HU and IHF proteins: Accessory factors for complex protein-DNA assemblies
    • E.C.C. Lin A.S. Lynch
    • H.A. Nash The HU and IHF proteins: accessory factors for complex protein-DNA assemblies E.C.C. Lin A.S Lynch Regulation of Gene Expression in E. coli 1996 149 179
    • (1996) Regulation of Gene Expression in E. Coli , pp. 149-179
    • Nash, H.A.1
  • 17
    • 0030451819 scopus 로고    scopus 로고
    • Crystal structure of an IHF-DNA complex: A protein-induced DNA U-turn
    • P.A. Rice, S.-w. Yang, K. Mizuuchi, and H. Nash Crystal structure of an IHF-DNA complex: a protein-induced DNA U-turn Cell 87 1996 1295 1306
    • (1996) Cell , vol.87 , pp. 1295-1306
    • Rice, P.A.1    Yang, S.-W.2    Mizuuchi, K.3    Nash, H.4
  • 18
    • 0035881460 scopus 로고    scopus 로고
    • Mechanistic aspects of DnaA-RepA interaction as revealed by yeast forward and reverse two-hybrid analysis
    • R. Sharma, A. Kachroo, and D. Bastia Mechanistic aspects of DnaA-RepA interaction as revealed by yeast forward and reverse two-hybrid analysis EMBO J. 20 2001 4577 4587
    • (2001) EMBO J. , vol.20 , pp. 4577-4587
    • Sharma, R.1    Kachroo, A.2    Bastia, D.3
  • 19
    • 0023644961 scopus 로고
    • The integration host factor of E. coli binds to bent DNA at the origin of replication of the plasmid pSC101
    • T.T. Stenzel, P. Patel, and D. Bastia The integration host factor of E. coli binds to bent DNA at the origin of replication of the plasmid pSC101 Cell 49 1987 709 717
    • (1987) Cell , vol.49 , pp. 709-717
    • Stenzel, T.T.1    Patel, P.2    Bastia, D.3
  • 20
    • 0031111296 scopus 로고    scopus 로고
    • DNA-protein interactions: IHF-the master bender
    • A. Travers DNA-protein interactions: IHF-the master bender Curr. Biol. 7 1997 R252 R254
    • (1997) Curr. Biol. , vol.7
    • Travers, A.1
  • 21
    • 0032167615 scopus 로고    scopus 로고
    • Mechansitic studies of initiator-initiator interaction and replication initiation
    • L. Ya-Bin, H.J. Datta, and D. Bastia Mechansitic studies of initiator-initiator interaction and replication initiation EMBO J. 17 1998 5192 5200
    • (1998) EMBO J. , vol.17 , pp. 5192-5200
    • Ya-Bin, L.1    Datta, H.J.2    Bastia, D.3
  • 22
    • 0029561532 scopus 로고
    • Comparison of protein binding to DNA in vivo and in vitro: Defining an effective intracellular target
    • S.-w. Yang, and H.A. Nash Comparison of protein binding to DNA in vivo and in vitro: defining an effective intracellular target EMBO J. 14 1995 6292 6300
    • (1995) EMBO J. , vol.14 , pp. 6292-6300
    • Yang, S.-W.1    Nash, H.A.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.