-
1
-
-
0037015054
-
Structural genomics of the Thermotoga maritima proteome implemented in a high-throughput structure determination pipeline
-
S.A. Lesley, P. Kuhn, A. Godzik, A.M. Deacon, I. Mathews, and A. Kreusch Structural genomics of the Thermotoga maritima proteome implemented in a high-throughput structure determination pipeline Proc. Natl Acad. Sci USA 99 2002 11664 11669
-
(2002)
Proc. Natl Acad. Sci USA
, vol.99
, pp. 11664-11669
-
-
Lesley, S.A.1
Kuhn, P.2
Godzik, A.3
Deacon, A.M.4
Mathews, I.5
Kreusch, A.6
-
2
-
-
0038384417
-
Shotgun crystallization strategy for structural genomics: An optimized two-tiered crystallization screen against the Thermatoga maritima proteome
-
R. Page, S.K. Grzechnik, J.M. Canaves, G. Spraggon, A. Kreusch, R.C. Stevens, and S.A. Lesley Shotgun crystallization strategy for structural genomics: an optimized two-tiered crystallization screen against the Thermatoga maritima proteome Acta Crystallog. sect. D 59 2003 1028 1037
-
(2003)
Acta Crystallog. Sect. D
, vol.59
, pp. 1028-1037
-
-
Page, R.1
Grzechnik, S.K.2
Canaves, J.M.3
Spraggon, G.4
Kreusch, A.5
Stevens, R.C.6
Lesley, S.A.7
-
3
-
-
0036965184
-
Domain organization of D-AKAP2 revealed by enhanced deuterium exchange mass spectrometry (DXMS)
-
Y. Hamuro, L.L. Burns, J.M. Canaves, R.C. Hoffman, S.S. Taylor, and V.L. Woods Domain organization of D-AKAP2 revealed by enhanced deuterium exchange mass spectrometry (DXMS) J. Mol. Biol. 321 2002 703 714
-
(2002)
J. Mol. Biol.
, vol.321
, pp. 703-714
-
-
Hamuro, Y.1
Burns, L.L.2
Canaves, J.M.3
Hoffman, R.C.4
Taylor, S.S.5
Woods, V.L.6
-
4
-
-
0033976458
-
The Pfam Protein Families Database
-
A. Bateman, E. Birney, R. Durbin, S.R. Eddy, K.L. Howe, and E.L.L. Sonnhammer The Pfam Protein Families Database Nucl. Acids Res. 28 2000 263 266
-
(2000)
Nucl. Acids Res.
, vol.28
, pp. 263-266
-
-
Bateman, A.1
Birney, E.2
Durbin, R.3
Eddy, S.R.4
Howe, K.L.5
Sonnhammer, E.L.L.6
-
5
-
-
0035024436
-
Protein crystallization by rational mutagenesis of surface residues: Lys to Ala mutations promote crystallization of RhoGDI
-
K.L. Longenecker, S.M. Garrard, P.J. Sheffield, and Z.S. Derewenda Protein crystallization by rational mutagenesis of surface residues: Lys to Ala mutations promote crystallization of RhoGDI Acta Crystallog. sect. D 57 2001 679 688
-
(2001)
Acta Crystallog. Sect. D
, vol.57
, pp. 679-688
-
-
Longenecker, K.L.1
Garrard, S.M.2
Sheffield, P.J.3
Derewenda, Z.S.4
-
6
-
-
0036900352
-
The impact of Glu→Ala and Glu→Asp mutations on the crystallization properties of RhoGDI: The structure of RhoGDI at 1.3 Å resolution
-
A. Mateja, Y. Devedjiev, D. Krowarsch, K. Longenecker, Z. Dauter, J. Otlewski, and Z.S. Derewenda The impact of Glu→Ala and Glu→Asp mutations on the crystallization properties of RhoGDI: the structure of RhoGDI at 1.3 Å resolution Acta Crystallog. sect. D 58 2002 1983 1991
-
(2002)
Acta Crystallog. Sect. D
, vol.58
, pp. 1983-1991
-
-
Mateja, A.1
Devedjiev, Y.2
Krowarsch, D.3
Longenecker, K.4
Dauter, Z.5
Otlewski, J.6
Derewenda, Z.S.7
-
7
-
-
0029004044
-
Probing the solution structure of the DNA-binding protein MAX by a combination of proteolysis and mass spectrometry
-
S.L. Cohen, A.R. Ferre-D'Amare, S.K. Burley, and B.T. Chait Probing the solution structure of the DNA-binding protein MAX by a combination of proteolysis and mass spectrometry Protein Sci. 4 1995 1088 1099
-
(1995)
Protein Sci.
, vol.4
, pp. 1088-1099
-
-
Cohen, S.L.1
Ferre-D'Amare, A.R.2
Burley, S.K.3
Chait, B.T.4
-
8
-
-
9144261138
-
Mining the structural genomics pipeline: Identification of protein properties that affect high-throughput experimental analysis
-
C.S. Goh, N. Lan, S.M. Douglas, B. Wu, N. Echols, and A. Smith Mining the structural genomics pipeline: identification of protein properties that affect high-throughput experimental analysis J. Mol. Biol. 336 2004 115 130
-
(2004)
J. Mol. Biol.
, vol.336
, pp. 115-130
-
-
Goh, C.S.1
Lan, N.2
Douglas, S.M.3
Wu, B.4
Echols, N.5
Smith, A.6
-
9
-
-
0029901640
-
Analysis of compositionally biased regions in sequence databases
-
J.C. Wootton, and S. Federhen Analysis of compositionally biased regions in sequence databases Methods Enzymol. 266 1996 554 571
-
(1996)
Methods Enzymol.
, vol.266
, pp. 554-571
-
-
Wootton, J.C.1
Federhen, S.2
-
11
-
-
0033485517
-
Improved microbial gene identification with GLIMMER
-
A.L. Delcher, D. Harmon, S. Kasif, O. White, and S.L. Salzberg Improved microbial gene identification with GLIMMER Nucl. Acids Res. 27 1999 4636 4641
-
(1999)
Nucl. Acids Res.
, vol.27
, pp. 4636-4641
-
-
Delcher, A.L.1
Harmon, D.2
Kasif, S.3
White, O.4
Salzberg, S.L.5
-
13
-
-
0027521381
-
The focusing positions of polypeptides in immobilized pH gradients can be predicted from their amino acid sequences
-
B. Bjellqvist, G.J. Hughes, C. Pasquali, N. Paquet, F. Ravier, and J.-C. Sanchez The focusing positions of polypeptides in immobilized pH gradients can be predicted from their amino acid sequences Electrophoresis 14 1993 1023 1031
-
(1993)
Electrophoresis
, vol.14
, pp. 1023-1031
-
-
Bjellqvist, B.1
Hughes, G.J.2
Pasquali, C.3
Paquet, N.4
Ravier, F.5
Sanchez, J.-C.6
-
14
-
-
5044250423
-
Protein isoelectric point as a predictor for increased crystallization screening efficiency
-
K.A. Kantardjieff, and B. Rupp Protein isoelectric point as a predictor for increased crystallization screening efficiency Bioinformatics 20 2004 2162 2168
-
(2004)
Bioinformatics
, vol.20
, pp. 2162-2168
-
-
Kantardjieff, K.A.1
Rupp, B.2
-
15
-
-
0031053054
-
Reductive alkylation of lysine residues to alter crystallization properties of proteins
-
I. Rayment Reductive alkylation of lysine residues to alter crystallization properties of proteins Methods Enzymol. 276 1997 171 179
-
(1997)
Methods Enzymol.
, vol.276
, pp. 171-179
-
-
Rayment, I.1
-
16
-
-
0030915773
-
Significant role of electrostatic interactions for stabilization of protein assemblies
-
T. Takahashi Significant role of electrostatic interactions for stabilization of protein assemblies Advan. Biophys. 34 1997 41 54
-
(1997)
Advan. Biophys.
, vol.34
, pp. 41-54
-
-
Takahashi, T.1
-
17
-
-
0033198986
-
Crystal engineering: A case study using the 24 kDa fragment of the DNA gyrase B subunit from Escherichia coli
-
A. D'Arcy, M. Stihle, D. Kostrewa, and G. Dale Crystal engineering: a case study using the 24 kDa fragment of the DNA gyrase B subunit from Escherichia coli Acta Crystallog. sect. D 55 1999 1623 1625
-
(1999)
Acta Crystallog. Sect. D
, vol.55
, pp. 1623-1625
-
-
D'Arcy, A.1
Stihle, M.2
Kostrewa, D.3
Dale, G.4
-
18
-
-
0020475449
-
A simple method for displaying the hydropathic character of a protein
-
J. Kyte, and R.F. Doolittle A simple method for displaying the hydropathic character of a protein J. Mol. Biol. 157 1982 105 132
-
(1982)
J. Mol. Biol.
, vol.157
, pp. 105-132
-
-
Kyte, J.1
Doolittle, R.F.2
-
19
-
-
0034899781
-
Evaluation of methods for the prediction of membrane spanning regions
-
S. Möller, M.D.R. Croning, and R. Apweiler Evaluation of methods for the prediction of membrane spanning regions Bioinformatics 17 2001 646 653
-
(2001)
Bioinformatics
, vol.17
, pp. 646-653
-
-
Möller, S.1
Croning, M.D.R.2
Apweiler, R.3
-
20
-
-
0037132511
-
Reliability of transmembrane predictions in whole-genome data
-
L. Käll, and E.L.L. Sonnhammer Reliability of transmembrane predictions in whole-genome data FEBS Letters 532 2002 415 418
-
(2002)
FEBS Letters
, vol.532
, pp. 415-418
-
-
Käll, L.1
Sonnhammer, E.L.L.2
-
21
-
-
0030614959
-
Identification of prokaryotic and eukaryotic signal peptides and prediction of their cleavage sites
-
H. Nielsen, J. Engelbrecht, S. Brunak, and G. von Heijne Identification of prokaryotic and eukaryotic signal peptides and prediction of their cleavage sites Protein Eng. 10 1997 1 6
-
(1997)
Protein Eng.
, vol.10
, pp. 1-6
-
-
Nielsen, H.1
Engelbrecht, J.2
Brunak, S.3
Von Heijne, G.4
-
22
-
-
0031240609
-
A neural network method for identification of prokaryotic and eukaryotic signal peptides and prediction of their cleavage sites
-
H. Nielsen, J. Engelbrecht, S. Brunak, and G. von Heijne A neural network method for identification of prokaryotic and eukaryotic signal peptides and prediction of their cleavage sites Int. J. Neural Sys. 8 1997 581 599
-
(1997)
Int. J. Neural Sys.
, vol.8
, pp. 581-599
-
-
Nielsen, H.1
Engelbrecht, J.2
Brunak, S.3
Von Heijne, G.4
-
23
-
-
0028501914
-
Non-globular domains in protein sequences: Automated segmentation using complexity measures
-
J.C. Wootton Non-globular domains in protein sequences: automated segmentation using complexity measures Comput. Chem. 18 1994 269 285
-
(1994)
Comput. Chem.
, vol.18
, pp. 269-285
-
-
Wootton, J.C.1
-
24
-
-
0035188314
-
Sequence complexity of disordered protein
-
P. Romero, Z. Obradovic, X. Li, E.C. Garner, C. Brown, and A.K. Dunker Sequence complexity of disordered protein Proteins: Struct. Funct. Genet. 42 2001 38 48
-
(2001)
Proteins: Struct. Funct. Genet.
, vol.42
, pp. 38-48
-
-
Romero, P.1
Obradovic, Z.2
Li, X.3
Garner, E.C.4
Brown, C.5
Dunker, A.K.6
-
25
-
-
0001514262
-
Statistics of local complexity in amino acid sequences and sequence databases
-
J.C. Wootton, and S. Federhen Statistics of local complexity in amino acid sequences and sequence databases Comput. Chem. 17 1993 149 163
-
(1993)
Comput. Chem.
, vol.17
, pp. 149-163
-
-
Wootton, J.C.1
Federhen, S.2
-
26
-
-
0033954256
-
The Protein Data Bank
-
H.M. Berman, J. Westbrook, Z. Feng, G. Gilliland, T.N. Bhat, and H. Weissig The Protein Data Bank Nucl. Acids Res. 28 2000 235 242
-
(2000)
Nucl. Acids Res.
, vol.28
, pp. 235-242
-
-
Berman, H.M.1
Westbrook, J.2
Feng, Z.3
Gilliland, G.4
Bhat, T.N.5
Weissig, H.6
-
29
-
-
18344375268
-
An approach to rapid protein crystallization using nanodroplets
-
B.D. Santarsiero, D.T. Yegian, C.C. Lee, G. Spraggon, J. Gu, and D. Scheibe An approach to rapid protein crystallization using nanodroplets J. Appl. Crystallog. 35 2002 278 281
-
(2002)
J. Appl. Crystallog.
, vol.35
, pp. 278-281
-
-
Santarsiero, B.D.1
Yegian, D.T.2
Lee, C.C.3
Spraggon, G.4
Gu, J.5
Scheibe, D.6
-
30
-
-
0001290045
-
PROSITE: A documented database using patterns and profiles as motif descriptors
-
C.J.A. Sigrist, L. Cerutti, N. Hulo, A. Gattiker, L. Falquet, and M. Pagni PROSITE: A documented database using patterns and profiles as motif descriptors Brief. Bioinform. 3 2002 265 274
-
(2002)
Brief. Bioinform.
, vol.3
, pp. 265-274
-
-
Sigrist, C.J.A.1
Cerutti, L.2
Hulo, N.3
Gattiker, A.4
Falquet, L.5
Pagni, M.6
-
31
-
-
0001244666
-
ScanProsite: A reference implementation of a PROSITE scanning tool
-
A. Gattiker, E. Gasteiger, and A. Bairoch ScanProsite: a reference implementation of a PROSITE scanning tool Appl. Bioinf. 1 2002 107 108
-
(2002)
Appl. Bioinf.
, vol.1
, pp. 107-108
-
-
Gattiker, A.1
Gasteiger, E.2
Bairoch, A.3
-
32
-
-
0033067705
-
WinGene/WinPep: User-friendly software for the analysis of amino acid sequences
-
L. Hennig WinGene/WinPep: user-friendly software for the analysis of amino acid sequences BioTechniques 26 1999 1170 1172
-
(1999)
BioTechniques
, vol.26
, pp. 1170-1172
-
-
Hennig, L.1
-
33
-
-
0026356891
-
Predicting coiled coils from protein sequences
-
A. Lupas, M. Van Dyke, and J. Stock Predicting coiled coils from protein sequences Science 252 1991 1162 1164
-
(1991)
Science
, vol.252
, pp. 1162-1164
-
-
Lupas, A.1
Van Dyke, M.2
Stock, J.3
|