-
2
-
-
0034598746
-
Distinct types of diffuse large B-cell lymphoma identified by gene expression profiling
-
A.A. Alizadeh, M.B. Eisen, R.E. Davis, C. Ma et al. Distinct types of diffuse large B-cell lymphoma identified by gene expression profiling. Nature, 403(6769):503-511, 2000.
-
(2000)
Nature
, vol.403
, Issue.6769
, pp. 503-511
-
-
Alizadeh, A.A.1
Eisen, M.B.2
Davis, R.E.3
Ma, C.4
-
4
-
-
19344374050
-
Similarities and differences in genome-wide expression data of six organisms
-
S. Bergman, J. Ihmels, and N. Barkai. Similarities and differences in genome-wide expression data of six organisms. PLoS, 2(1):E9, 2004.
-
(2004)
PLoS
, vol.2
, Issue.1
, pp. E9
-
-
Bergman, S.1
Ihmels, J.2
Barkai, N.3
-
5
-
-
84864994884
-
Iterative signature algorithm for the analysis of large-scale gene expression data
-
S. Bergmann, J. Ihmels, and N. Barkai. Iterative signature algorithm for the analysis of large-scale gene expression data. Phys Rev E Stat Nonlin Soft Matter Phys, 67(3 Pt 1):03190201-18, 2003.
-
(2003)
Phys Rev E Stat Nonlin Soft Matter Phys
, vol.67
, Issue.3
-
-
Bergmann, S.1
Ihmels, J.2
Barkai, N.3
-
6
-
-
0034566393
-
Biclustering of expression data
-
AAAI Press
-
Y. Cheng and G.M. Church. Biclustering of expression data. In Proc. ISMB'00, pages 93-103. AAAI Press, 2000.
-
(2000)
Proc. ISMB'00
, pp. 93-103
-
-
Cheng, Y.1
Church, G.M.2
-
7
-
-
0029852580
-
Use of a cDNA microarray to analyse gene expression patterns in human cancer
-
J. DeRisi, L. Penland, P.O. Brown, and M.L. Bittner et al. Use of a cDNA microarray to analyse gene expression patterns in human cancer. Nat Genet, 14:457-460, 1996.
-
(1996)
Nat Genet
, vol.14
, pp. 457-460
-
-
DeRisi, J.1
Penland, L.2
Brown, P.O.3
Bittner, M.L.4
-
8
-
-
0035162698
-
Genomic expression responses to DNA-damaging agents and the regulatory role of the yeast ATR homolog mec1p
-
A.P. Gasch, M. Huang, S. Metzner, and D. Botstein et al. Genomic expression responses to DNA-damaging agents and the regulatory role of the yeast ATR homolog mec1p. Mol. Biol. Cell, 12(10):2987-3003, 2001.
-
(2001)
Mol. Biol. Cell
, vol.12
, Issue.10
, pp. 2987-3003
-
-
Gasch, A.P.1
Huang, M.2
Metzner, S.3
Botstein, D.4
-
9
-
-
0034710876
-
Coupled two-way clustering analysis of gene microarray data
-
G. Getz, E. Levine, and E. Domany. Coupled two-way clustering analysis of gene microarray data. Proc. Natl. Acad. Sci. USA, 97(22):12079-84, 2000.
-
(2000)
Proc. Natl. Acad. Sci. USA
, vol.97
, Issue.22
, pp. 12079-12084
-
-
Getz, G.1
Levine, E.2
Domany, E.3
-
10
-
-
0033746670
-
Super-paramagnetic clustering of yeast gene expression profiles
-
G. Getz, E. Levine, E. Domany, and M.Q. Zhang. Super-paramagnetic clustering of yeast gene expression profiles. Physica, A279:457, 2000.
-
(2000)
Physica
, vol.A279
, pp. 457
-
-
Getz, G.1
Levine, E.2
Domany, E.3
Zhang, M.Q.4
-
11
-
-
0034628901
-
Computational identification of cis-regulatory elements associated with groups of functionally related genes in Saccharomyces Cerevisiae
-
J.D. Hughes, P.E. Estep, S. Tavazoie, and G.M. Church. Computational identification of cis-regulatory elements associated with groups of functionally related genes in Saccharomyces Cerevisiae. J. Mol. Biol., 296:1205-1214, 2000. http://atlas.med.harvard.edu/.
-
(2000)
J. Mol. Biol
, vol.296
, pp. 1205-1214
-
-
Hughes, J.D.1
Estep, P.E.2
Tavazoie, S.3
Church, G.M.4
-
12
-
-
0036699526
-
Revealing modular organization in the yeast transcriptional network
-
J. Ihmels, G. Friedlander, S. Bergmann, and O. Sarig et al. Revealing modular organization in the yeast transcriptional network. Nature Genetics, 31(4):370-7, 2002.
-
(2002)
Nature Genetics
, vol.31
, Issue.4
, pp. 370-377
-
-
Ihmels, J.1
Friedlander, G.2
Bergmann, S.3
Sarig, O.4
-
13
-
-
0037399130
-
Spectral biclustering of microarray data: Coclustering genes and conditions
-
Y. Kluger, R. Barsi, J.T. Cheng, and M. Gerstein. Spectral biclustering of microarray data: coclustering genes and conditions. Genome Res., 13(4):703-16, 2003.
-
(2003)
Genome Res
, vol.13
, Issue.4
, pp. 703-716
-
-
Kluger, Y.1
Barsi, R.2
Cheng, J.T.3
Gerstein, M.4
-
14
-
-
0036012349
-
Plaid models for gene expression data
-
L. Lazzeroni and A. Owen. Plaid models for gene expression data. Statistica Sinica, 12:61-86, 2002.
-
(2002)
Statistica Sinica
, vol.12
, pp. 61-86
-
-
Lazzeroni, L.1
Owen, A.2
-
15
-
-
0004161838
-
-
Cambridge University Press, Cambridge (UK) and New York, 2nd edition
-
W.H. Press, B.P. Flannery, S.A. Teukolsky, and W.T. Vetterling. Numerical Recipes: The Art of Scientific Computing. Cambridge University Press, Cambridge (UK) and New York, 2nd edition, 1992.
-
(1992)
Numerical Recipes: The Art of Scientific Computing
-
-
Press, W.H.1
Flannery, B.P.2
Teukolsky, S.A.3
Vetterling, W.T.4
-
16
-
-
0347201147
-
Multiclass cancer diagnosis using tumor gene expression signature
-
S. Ramaswamy, P. Tamayo, R. Rifkin and S. Mukherjee et al. Multiclass cancer diagnosis using tumor gene expression signature. Proc. Natl. Acad. Sci. USA, 98(26):15149-15154, 2001.
-
(2001)
Proc. Natl. Acad. Sci. USA
, vol.98
, Issue.26
, pp. 15149-15154
-
-
Ramaswamy, S.1
Tamayo, P.2
Rifkin, R.3
Mukherjee, S.4
-
17
-
-
0038271734
-
Expression profiles of acute lymphoblastic and myeloblastic leukemias with all-1 rearrangements
-
T. Rozovskaia, O. Ravid-Amir, S. Tillib, and G. Getz et al Expression profiles of acute lymphoblastic and myeloblastic leukemias with all-1 rearrangements. Proc Natl Acad Sci USA, 100(13):7853-8, 2003.
-
(2003)
Proc Natl Acad Sci USA
, vol.100
, Issue.13
, pp. 7853-7858
-
-
Rozovskaia, T.1
Ravid-Amir, O.2
Tillib, S.3
Getz, G.4
-
18
-
-
0028806048
-
Quantitative monitoring of gene expression patterns with a complementary DNA microarray
-
M. Schena, D. Sharon, R.W. Davis, and P.O. Brown et al. Quantitative monitoring of gene expression patterns with a complementary DNA microarray. Science, 270:467-470, 1995.
-
(1995)
Science
, vol.270
, pp. 467-470
-
-
Schena, M.1
Sharon, D.2
Davis, R.W.3
Brown, P.O.4
-
19
-
-
0037941585
-
Module networks: Identifying regulatory modules and their condition-specific regulators from gene expression data
-
E. Segal, M. Shapira, A. Regev, and D. Pe'er et al. Module networks: identifying regulatory modules and their condition-specific regulators from gene expression data. Nat Genet., 34(2):166-76, 2003.
-
(2003)
Nat Genet
, vol.34
, Issue.2
, pp. 166-176
-
-
Segal, E.1
Shapira, M.2
Regev, A.3
Pe'er, D.4
-
20
-
-
85145626290
-
-
Software package, Tel-Aviv University
-
R. Sharan, A. Maron-Katz, N. Arbili, and R. Shamir. EXPANDER: EXPression ANalyzer and DisplayER, 2002. Software package, Tel-Aviv University, http://www.cs.tau.ac.il/~rshamir/expander/expander.html.
-
(2002)
EXPANDER: EXPression ANalyzer and DisplayER
-
-
Sharan, R.1
Maron-Katz, A.2
Arbili, N.3
Shamir, R.4
-
21
-
-
0141506116
-
CLICK and EXPANDER: A system for clustering and visualizing gene expression data
-
R. Sharan, A. Maron-Katz, and R. Shamir. CLICK and EXPANDER: a system for clustering and visualizing gene expression data. Bioinformatics, 2003.
-
(2003)
Bioinformatics
-
-
Sharan, R.1
Maron-Katz, A.2
Shamir, R.3
-
22
-
-
4444367133
-
Biclustering gene expression data by Gibbs sampling
-
Q. Sheng, Y. Moreau, and B. De Moor. Biclustering gene expression data by Gibbs sampling. Bioinformatics, 19(Supp 2):i196-i205, 2003.
-
(2003)
Bioinformatics
, vol.19
, pp. i196-i205
-
-
Sheng, Q.1
Moreau, Y.2
De Moor, B.3
-
23
-
-
0031742022
-
Comprehensive identification of cell cycle-regulated genes of the yeast Saccharomyces cerevisiae by microarray hybridization
-
P.T. Spellman, G. Sherlock,M.Q. Zhang, and V.R. Iyer et al Comprehensive identification of cell cycle-regulated genes of the yeast Saccharomyces cerevisiae by microarray hybridization. Mol. Biol. Cell, 9:3273-3297, 1998.
-
(1998)
Mol. Biol. Cell
, vol.9
, pp. 3273-3297
-
-
Spellman, P.T.1
Sherlock, G.2
Zhang, M.Q.3
Iyer, V.R.4
-
24
-
-
1542357674
-
Revealing modularity and organization in the yeast molecular network by integrated analysis of highly heterogeneous genomewide data
-
A. Tanay, R. Sharan, M. Kupiec, and R. Shamir. Revealing modularity and organization in the yeast molecular network by integrated analysis of highly heterogeneous genomewide data. Proc Natl Acad Sci U S A., 101(9):2981-6, 2004.
-
(2004)
Proc Natl Acad Sci U S A
, vol.101
, Issue.9
, pp. 2981-2986
-
-
Tanay, A.1
Sharan, R.2
Kupiec, M.3
Shamir, R.4
|