-
2
-
-
79251621970
-
Dynamic DNA nanotechnology using strand-displacement reactions
-
Zhang, D. Y. and Seelig, G. (2011) Dynamic DNA nanotechnology using strand-displacement reactions. Nat. Chem. 3, 103-113, 10.1038/nchem.957
-
(2011)
Nat. Chem.
, vol.3
, pp. 103-113
-
-
Zhang, D.Y.1
Seelig, G.2
-
3
-
-
33847036990
-
Strategies for silencing human disease using RNA interference
-
Kim, D. H. and Rossi, J. J. (2007) Strategies for silencing human disease using RNA interference. Nat. Rev. Genet. 8, 173-184, 10.1038/nrg2006
-
(2007)
Nat. Rev. Genet.
, vol.8
, pp. 173-184
-
-
Kim, D.H.1
Rossi, J.J.2
-
4
-
-
60149094505
-
RNA interference: From basic research to therapeutic applications
-
Kurreck, J. (2009) RNA interference: From basic research to therapeutic applications. Angew. Chem., Int. Ed. 48, 1378-1398, 10.1002/anie.200802092
-
(2009)
Angew. Chem., Int. Ed.
, vol.48
, pp. 1378-1398
-
-
Kurreck, J.1
-
5
-
-
73249132354
-
An activatable siRNA probe: Trigger-RNA-dependent activation of RNAi function
-
Masu, H., Narita, A., Tokunaga, T., Ohashi, M., Aoyama, Y., and Sando, S. (2009) An activatable siRNA probe: Trigger-RNA-dependent activation of RNAi function. Angew. Chem., Int. Ed. 48, 9481-9483, 10.1002/anie.200903925
-
(2009)
Angew. Chem., Int. Ed.
, vol.48
, pp. 9481-9483
-
-
Masu, H.1
Narita, A.2
Tokunaga, T.3
Ohashi, M.4
Aoyama, Y.5
Sando, S.6
-
6
-
-
77952503333
-
Logic integration of mRNA signals by an RNAi-based molecular computer
-
Xie, Z., Liu, S. J., Bleris, L., and Benenson, Y. (2010) Logic integration of mRNA signals by an RNAi-based molecular computer. Nucleic Acids Res. 38, 2692-2701, 10.1093/nar/gkq117
-
(2010)
Nucleic Acids Res.
, vol.38
, pp. 2692-2701
-
-
Xie, Z.1
Liu, S.J.2
Bleris, L.3
Benenson, Y.4
-
7
-
-
79952262998
-
Combinatorially inducible RNA interference triggered by chemically modified oligonucleotides
-
Kumar, D., Kim, S. H., and Yokobayashi, Y. (2011) Combinatorially inducible RNA interference triggered by chemically modified oligonucleotides. J. Am. Chem. Soc. 133, 2783-2788, 10.1021/ja1107436
-
(2011)
J. Am. Chem. Soc.
, vol.133
, pp. 2783-2788
-
-
Kumar, D.1
Kim, S.H.2
Yokobayashi, Y.3
-
8
-
-
84888357944
-
Conditional Dicer substrate formation via shape and sequence transduction with small conditional RNAs
-
Hochrein, L. M., Schwarzkopf, M., Shahgholi, M., Yin, P., and Pierce, N. A. (2013) Conditional Dicer substrate formation via shape and sequence transduction with small conditional RNAs. J. Am. Chem. Soc. 135, 17322-17330, 10.1021/ja404676x
-
(2013)
J. Am. Chem. Soc.
, vol.135
, pp. 17322-17330
-
-
Hochrein, L.M.1
Schwarzkopf, M.2
Shahgholi, M.3
Yin, P.4
Pierce, N.A.5
-
9
-
-
84960510666
-
Multistrand structure prediction of nucleic acid assemblies and design of RNA switches
-
Bindewald, E., Afonin, K. A., Viard, M., Zakrevsky, P., Kim, T., and Shapiro, B. A. (2016) Multistrand structure prediction of nucleic acid assemblies and design of RNA switches. Nano Lett. 16, 1726-1735, 10.1021/acs.nanolett.5b04651
-
(2016)
Nano Lett.
, vol.16
, pp. 1726-1735
-
-
Bindewald, E.1
Afonin, K.A.2
Viard, M.3
Zakrevsky, P.4
Kim, T.5
Shapiro, B.A.6
-
10
-
-
79952358406
-
A role for human Dicer in pre-RISC loading of siRNAs
-
Sakurai, K., Amarzguioui, M., Kim, D. H., Alluin, J., Heale, B., Song, M. S., Gatignol, A., Behlke, M. A., and Rossi, J. J. (2011) A role for human Dicer in pre-RISC loading of siRNAs. Nucleic Acids Res. 39, 1510-1525, 10.1093/nar/gkq846
-
(2011)
Nucleic Acids Res.
, vol.39
, pp. 1510-1525
-
-
Sakurai, K.1
Amarzguioui, M.2
Kim, D.H.3
Alluin, J.4
Heale, B.5
Song, M.S.6
Gatignol, A.7
Behlke, M.A.8
Rossi, J.J.9
-
11
-
-
78649683035
-
Quantitative evaluation of siRNA delivery in vivo
-
Pei, Y., Hancock, P. J., Zhang, H., Bartz, R., Cherrin, C., Innocent, N., Pomerantz, C. J., Seitzer, J., Koser, M. L., Abrams, M. T., Xu, Y., Kuklin, N. A., Burke, P. A., Sachs, A. B., Sepp-Lorenzino, L., and Barnett, S. F. (2010) Quantitative evaluation of siRNA delivery in vivo. RNA 16, 2553-2563, 10.1261/rna.2255810
-
(2010)
RNA
, vol.16
, pp. 2553-2563
-
-
Pei, Y.1
Hancock, P.J.2
Zhang, H.3
Bartz, R.4
Cherrin, C.5
Innocent, N.6
Pomerantz, C.J.7
Seitzer, J.8
Koser, M.L.9
Abrams, M.T.10
Xu, Y.11
Kuklin, N.A.12
Burke, P.A.13
Sachs, A.B.14
Sepp-Lorenzino, L.15
Barnett, S.F.16
-
12
-
-
78149355812
-
NUPACK: Analysis and design of nucleic acid systems
-
Zadeh, J. N., Steenberg, C. D., Bois, J. S., Wolfe, B. R., Pierce, M. B., Khan, A. R., Dirks, R. M., and Pierce, N. A. (2011) NUPACK: Analysis and design of nucleic acid systems. J. Comput. Chem. 32, 170-173, 10.1002/jcc.21596
-
(2011)
J. Comput. Chem.
, vol.32
, pp. 170-173
-
-
Zadeh, J.N.1
Steenberg, C.D.2
Bois, J.S.3
Wolfe, B.R.4
Pierce, M.B.5
Khan, A.R.6
Dirks, R.M.7
Pierce, N.A.8
-
13
-
-
85014290774
-
Constrained multistate sequence design for nucleic acid reaction pathway engineering
-
Wolfe, B. R., Porubsky, N. J., Zadeh, J. N., Dirks, R. M., and Pierce, N. A. (2017) Constrained multistate sequence design for nucleic acid reaction pathway engineering. J. Am. Chem. Soc. 139, 3134-3144, 10.1021/jacs.6b12693
-
(2017)
J. Am. Chem. Soc.
, vol.139
, pp. 3134-3144
-
-
Wolfe, B.R.1
Porubsky, N.J.2
Zadeh, J.N.3
Dirks, R.M.4
Pierce, N.A.5
-
14
-
-
33847609597
-
Thermodynamic analysis of interacting nucleic acid strands
-
Dirks, R. M., Bois, J. S., Schaeffer, J. M., Winfree, E., and Pierce, N. A. (2007) Thermodynamic analysis of interacting nucleic acid strands. SIAM Rev. 49, 65-88, 10.1137/060651100
-
(2007)
SIAM Rev.
, vol.49
, pp. 65-88
-
-
Dirks, R.M.1
Bois, J.S.2
Schaeffer, J.M.3
Winfree, E.4
Pierce, N.A.5
-
15
-
-
0033591465
-
Expanded sequence dependence of thermodynamic parameters improves prediction of RNA secondary structure
-
Mathews, D. H., Sabina, J., Zuker, M., and Turner, D. H. (1999) Expanded sequence dependence of thermodynamic parameters improves prediction of RNA secondary structure. J. Mol. Biol. 288, 911-940, 10.1006/jmbi.1999.2700
-
(1999)
J. Mol. Biol.
, vol.288
, pp. 911-940
-
-
Mathews, D.H.1
Sabina, J.2
Zuker, M.3
Turner, D.H.4
-
16
-
-
78650488774
-
Nucleic acid sequence design via efficient ensemble defect optimization
-
Zadeh, J. N., Wolfe, B. R., and Pierce, N. A. (2011) Nucleic acid sequence design via efficient ensemble defect optimization. J. Comput. Chem. 32, 439-452, 10.1002/jcc.21633
-
(2011)
J. Comput. Chem.
, vol.32
, pp. 439-452
-
-
Zadeh, J.N.1
Wolfe, B.R.2
Pierce, N.A.3
-
17
-
-
84944716127
-
Sequence design for a test tube of interacting nucleic acid strands
-
Wolfe, B. R. and Pierce, N. A. (2015) Sequence design for a test tube of interacting nucleic acid strands. ACS Synth. Biol. 4, 1086-1100, 10.1021/sb5002196
-
(2015)
ACS Synth. Biol.
, vol.4
, pp. 1086-1100
-
-
Wolfe, B.R.1
Pierce, N.A.2
-
18
-
-
84963828879
-
Programmable control of bacterial gene expression with the combined CRISPR and antisense RNA system
-
Lee, Y. J., Hoynes-O'Connor, A., Leong, M. C., and Moon, T. S. (2016) Programmable control of bacterial gene expression with the combined CRISPR and antisense RNA system. Nucleic Acids Res. 44, 2462-2473, 10.1093/nar/gkw056
-
(2016)
Nucleic Acids Res.
, vol.44
, pp. 2462-2473
-
-
Lee, Y.J.1
Hoynes-O'Connor, A.2
Leong, M.C.3
Moon, T.S.4
-
19
-
-
85014514373
-
Rational design of inducible CRISPR guide RNAs for de novo assembly of transcriptional programs
-
Ferry, Q. R. V., Lyutova, R., and Fulga, T. A. (2017) Rational design of inducible CRISPR guide RNAs for de novo assembly of transcriptional programs. Nat. Commun. 8, 14633, 10.1038/ncomms14633
-
(2017)
Nat. Commun.
, vol.8
, pp. 14633
-
-
Ferry, Q.R.V.1
Lyutova, R.2
Fulga, T.A.3
|