-
1
-
-
82955162699
-
Follow-up of carriers of BRCA1 and BRCA2 variants of unknown significance: Variant reclassification and surgical decisions
-
Murray, M.L., Cerrato, F., Bennett, R.L., Jarvik, G.P., Follow-up of carriers of BRCA1 and BRCA2 variants of unknown significance: Variant reclassification and surgical decisions. Genet. Med. 13 (2011), 998–1005.
-
(2011)
Genet. Med.
, vol.13
, pp. 998-1005
-
-
Murray, M.L.1
Cerrato, F.2
Bennett, R.L.3
Jarvik, G.P.4
-
2
-
-
85026498795
-
Clinical decision-making in patients with variant of uncertain significance in BRCA1 or BRCA2 genes
-
Welsh, J.L., Hoskin, T.L., Day, C.N., Thomas, A.S., Cogswell, J.A., Couch, F.J., Boughey, J.C., Clinical decision-making in patients with variant of uncertain significance in BRCA1 or BRCA2 genes. Ann. Surg. Oncol. 24 (2017), 3067–3072.
-
(2017)
Ann. Surg. Oncol.
, vol.24
, pp. 3067-3072
-
-
Welsh, J.L.1
Hoskin, T.L.2
Day, C.N.3
Thomas, A.S.4
Cogswell, J.A.5
Couch, F.J.6
Boughey, J.C.7
-
3
-
-
84891809093
-
ClinVar: Public archive of relationships among sequence variation and human phenotype
-
Landrum, M.J., Lee, J.M., Riley, G.R., Jang, W., Rubinstein, W.S., Church, D.M., Maglott, D.R., ClinVar: Public archive of relationships among sequence variation and human phenotype. Nucleic Acids Res. 42 (2014), D980–D985.
-
(2014)
Nucleic Acids Res.
, vol.42
, pp. D980-D985
-
-
Landrum, M.J.1
Lee, J.M.2
Riley, G.R.3
Jang, W.4
Rubinstein, W.S.5
Church, D.M.6
Maglott, D.R.7
-
4
-
-
33644549954
-
Genetic and histopathologic evaluation of BRCA1 and BRCA2 DNA sequence variants of unknown clinical significance
-
Chenevix-Trench, G., Healey, S., Lakhani, S., Waring, P., Cummings, M., Brinkworth, R., Deffenbaugh, A.M., Burbidge, L.A., Pruss, D., Judkins, T., et al., kConFab Investigators. Genetic and histopathologic evaluation of BRCA1 and BRCA2 DNA sequence variants of unknown clinical significance. Cancer Res. 66 (2006), 2019–2027.
-
(2006)
Cancer Res.
, vol.66
, pp. 2019-2027
-
-
Chenevix-Trench, G.1
Healey, S.2
Lakhani, S.3
Waring, P.4
Cummings, M.5
Brinkworth, R.6
Deffenbaugh, A.M.7
Burbidge, L.A.8
Pruss, D.9
Judkins, T.10
-
5
-
-
74849096857
-
Characterization of BRCA1 ring finger variants of uncertain significance
-
Sweet, K., Senter, L., Pilarski, R., Wei, L., Toland, A.E., Characterization of BRCA1 ring finger variants of uncertain significance. Breast Cancer Res. Treat. 119 (2010), 737–743.
-
(2010)
Breast Cancer Res. Treat.
, vol.119
, pp. 737-743
-
-
Sweet, K.1
Senter, L.2
Pilarski, R.3
Wei, L.4
Toland, A.E.5
-
6
-
-
0037052688
-
Loss of heterozygosity analysis at the BRCA loci in tumor samples from patients with familial breast cancer
-
Osorio, A., de la Hoya, M., Rodríguez-López, R., Martínez-Ramírez, A., Cazorla, A., Granizo, J.J., Esteller, M., Rivas, C., Caldés, T., Benítez, J., Loss of heterozygosity analysis at the BRCA loci in tumor samples from patients with familial breast cancer. Int. J. Cancer 99 (2002), 305–309.
-
(2002)
Int. J. Cancer
, vol.99
, pp. 305-309
-
-
Osorio, A.1
de la Hoya, M.2
Rodríguez-López, R.3
Martínez-Ramírez, A.4
Cazorla, A.5
Granizo, J.J.6
Esteller, M.7
Rivas, C.8
Caldés, T.9
Benítez, J.10
-
7
-
-
35348834779
-
A systematic genetic assessment of 1,433 sequence variants of unknown clinical significance in the BRCA1 and BRCA2 breast cancer-predisposition genes
-
Easton, D.F., Deffenbaugh, A.M., Pruss, D., Frye, C., Wenstrup, R.J., Allen-Brady, K., Tavtigian, S.V., Monteiro, A.N.A., Iversen, E.S., Couch, F.J., Goldgar, D.E., A systematic genetic assessment of 1,433 sequence variants of unknown clinical significance in the BRCA1 and BRCA2 breast cancer-predisposition genes. Am. J. Hum. Genet. 81 (2007), 873–883.
-
(2007)
Am. J. Hum. Genet.
, vol.81
, pp. 873-883
-
-
Easton, D.F.1
Deffenbaugh, A.M.2
Pruss, D.3
Frye, C.4
Wenstrup, R.J.5
Allen-Brady, K.6
Tavtigian, S.V.7
Monteiro, A.N.A.8
Iversen, E.S.9
Couch, F.J.10
Goldgar, D.E.11
-
8
-
-
84928209346
-
Standards and guidelines for the interpretation of sequence variants: A joint consensus recommendation of the American College of Medical Genetics and Genomics and the Association for Molecular Pathology
-
Richards, S., Aziz, N., Bale, S., Bick, D., Das, S., Gastier-Foster, J., Grody, W.W., Hegde, M., Lyon, E., Spector, E., et al., ACMG Laboratory Quality Assurance Committee. Standards and guidelines for the interpretation of sequence variants: A joint consensus recommendation of the American College of Medical Genetics and Genomics and the Association for Molecular Pathology. Genet. Med. 17 (2015), 405–424.
-
(2015)
Genet. Med.
, vol.17
, pp. 405-424
-
-
Richards, S.1
Aziz, N.2
Bale, S.3
Bick, D.4
Das, S.5
Gastier-Foster, J.6
Grody, W.W.7
Hegde, M.8
Lyon, E.9
Spector, E.10
-
9
-
-
85021202732
-
Clinical laboratories collaborate to resolve differences in variant interpretations submitted to ClinVar
-
Harrison, S.M., Dolinsky, J.S., Knight Johnson, A.E., Pesaran, T., Azzariti, D.R., Bale, S., Chao, E.C., Das, S., Vincent, L., Rehm, H.L., Clinical laboratories collaborate to resolve differences in variant interpretations submitted to ClinVar. Genet. Med. 19 (2017), 1096–1104.
-
(2017)
Genet. Med.
, vol.19
, pp. 1096-1104
-
-
Harrison, S.M.1
Dolinsky, J.S.2
Knight Johnson, A.E.3
Pesaran, T.4
Azzariti, D.R.5
Bale, S.6
Chao, E.C.7
Das, S.8
Vincent, L.9
Rehm, H.L.10
-
10
-
-
0033569684
-
XRCC3 promotes homology-directed repair of DNA damage in mammalian cells
-
Pierce, A.J., Johnson, R.D., Thompson, L.H., Jasin, M., XRCC3 promotes homology-directed repair of DNA damage in mammalian cells. Genes Dev. 13 (1999), 2633–2638.
-
(1999)
Genes Dev.
, vol.13
, pp. 2633-2638
-
-
Pierce, A.J.1
Johnson, R.D.2
Thompson, L.H.3
Jasin, M.4
-
11
-
-
84951293785
-
Patterns and functional implications of rare germline variants across 12 cancer types
-
Lu, C., Xie, M., Wendl, M.C., Wang, J., McLellan, M.D., Leiserson, M.D.M., Huang, K.L., Wyczalkowski, M.A., Jayasinghe, R., Banerjee, T., et al. Patterns and functional implications of rare germline variants across 12 cancer types. Nat. Commun., 6, 2015, 10086.
-
(2015)
Nat. Commun.
, vol.6
, pp. 10086
-
-
Lu, C.1
Xie, M.2
Wendl, M.C.3
Wang, J.4
McLellan, M.D.5
Leiserson, M.D.M.6
Huang, K.L.7
Wyczalkowski, M.A.8
Jayasinghe, R.9
Banerjee, T.10
-
12
-
-
76249131820
-
Identification of breast tumor mutations in BRCA1 that abolish its function in homologous DNA recombination
-
Ransburgh, D.J.R., Chiba, N., Ishioka, C., Toland, A.E., Parvin, J.D., Identification of breast tumor mutations in BRCA1 that abolish its function in homologous DNA recombination. Cancer Res. 70 (2010), 988–995.
-
(2010)
Cancer Res.
, vol.70
, pp. 988-995
-
-
Ransburgh, D.J.R.1
Chiba, N.2
Ishioka, C.3
Toland, A.E.4
Parvin, J.D.5
-
13
-
-
84931347205
-
Massively parallel functional analysis of BRCA1 RING domain variants
-
Starita, L.M., Young, D.L., Islam, M., Kitzman, J.O., Gullingsrud, J., Hause, R.J., Fowler, D.M., Parvin, J.D., Shendure, J., Fields, S., Massively parallel functional analysis of BRCA1 RING domain variants. Genetics 200 (2015), 413–422.
-
(2015)
Genetics
, vol.200
, pp. 413-422
-
-
Starita, L.M.1
Young, D.L.2
Islam, M.3
Kitzman, J.O.4
Gullingsrud, J.5
Hause, R.J.6
Fowler, D.M.7
Parvin, J.D.8
Shendure, J.9
Fields, S.10
-
14
-
-
84873992181
-
Analysis of BRCA1 variants in double-strand break repair by homologous recombination and single-strand annealing
-
Towler, W.I., Zhang, J., Ransburgh, D.J.R., Toland, A.E., Ishioka, C., Chiba, N., Parvin, J.D., Analysis of BRCA1 variants in double-strand break repair by homologous recombination and single-strand annealing. Hum. Mutat. 34 (2013), 439–445.
-
(2013)
Hum. Mutat.
, vol.34
, pp. 439-445
-
-
Towler, W.I.1
Zhang, J.2
Ransburgh, D.J.R.3
Toland, A.E.4
Ishioka, C.5
Chiba, N.6
Parvin, J.D.7
-
15
-
-
83455229693
-
BRCA1 RING function is essential for tumor suppression but dispensable for therapy resistance
-
Drost, R., Bouwman, P., Rottenberg, S., Boon, U., Schut, E., Klarenbeek, S., Klijn, C., van der Heijden, I., van der Gulden, H., Wientjens, E., et al. BRCA1 RING function is essential for tumor suppression but dispensable for therapy resistance. Cancer Cell 20 (2011), 797–809.
-
(2011)
Cancer Cell
, vol.20
, pp. 797-809
-
-
Drost, R.1
Bouwman, P.2
Rottenberg, S.3
Boon, U.4
Schut, E.5
Klarenbeek, S.6
Klijn, C.7
van der Heijden, I.8
van der Gulden, H.9
Wientjens, E.10
-
16
-
-
77955347759
-
HERC2 is an E3 ligase that targets BRCA1 for degradation
-
Wu, W., Sato, K., Koike, A., Nishikawa, H., Koizumi, H., Venkitaraman, A.R., Ohta, T., HERC2 is an E3 ligase that targets BRCA1 for degradation. Cancer Res. 70 (2010), 6384–6392.
-
(2010)
Cancer Res.
, vol.70
, pp. 6384-6392
-
-
Wu, W.1
Sato, K.2
Koike, A.3
Nishikawa, H.4
Koizumi, H.5
Venkitaraman, A.R.6
Ohta, T.7
-
17
-
-
77949587649
-
Fast and accurate long-read alignment with Burrows-Wheeler transform
-
Li, H., Durbin, R., Fast and accurate long-read alignment with Burrows-Wheeler transform. Bioinformatics 26 (2010), 589–595.
-
(2010)
Bioinformatics
, vol.26
, pp. 589-595
-
-
Li, H.1
Durbin, R.2
-
18
-
-
77956125365
-
A flexible and efficient template format for circular consensus sequencing and SNP detection
-
e159–e159
-
Travers, K.J., Chin, C.-S., Rank, D.R., Eid, J.S., Turner, S.W., A flexible and efficient template format for circular consensus sequencing and SNP detection. Nucleic Acids Res., 38, 2010 e159–e159.
-
(2010)
Nucleic Acids Res.
, vol.38
-
-
Travers, K.J.1
Chin, C.-S.2
Rank, D.R.3
Eid, J.S.4
Turner, S.W.5
-
19
-
-
85047203682
-
Multiplex assessment of protein variant abundance by massively parallel sequencing
-
Matreyek, K.A., Starita, L.M., Stephany, J.J., Martin, B., Chiasson, M.A., Gray, V.E., Kircher, M., Khechaduri, A., Dines, J.N., Hause, R.J., et al. Multiplex assessment of protein variant abundance by massively parallel sequencing. Nat. Genet. 50 (2018), 874–882.
-
(2018)
Nat. Genet.
, vol.50
, pp. 874-882
-
-
Matreyek, K.A.1
Starita, L.M.2
Stephany, J.J.3
Martin, B.4
Chiasson, M.A.5
Gray, V.E.6
Kircher, M.7
Khechaduri, A.8
Dines, J.N.9
Hause, R.J.10
-
20
-
-
85027172421
-
A statistical framework for analyzing deep mutational scanning data
-
Rubin, A.F., Gelman, H., Lucas, N., Bajjalieh, S.M., Papenfuss, A.T., Speed, T.P., Fowler, D.M., A statistical framework for analyzing deep mutational scanning data. Genome Biol., 18, 2017, 150.
-
(2017)
Genome Biol.
, vol.18
, pp. 150
-
-
Rubin, A.F.1
Gelman, H.2
Lucas, N.3
Bajjalieh, S.M.4
Papenfuss, A.T.5
Speed, T.P.6
Fowler, D.M.7
-
21
-
-
17644444777
-
The R71G BRCA1 is a founder Spanish mutation and leads to aberrant splicing of the transcript
-
Vega, A., Campos, B., Bressac-De-Paillerets, B., Bond, P.M., Janin, N., Douglas, F.S., Domènech, M., Baena, M., Pericay, C., Alonso, C., et al. The R71G BRCA1 is a founder Spanish mutation and leads to aberrant splicing of the transcript. Hum. Mutat. 17 (2001), 520–521.
-
(2001)
Hum. Mutat.
, vol.17
, pp. 520-521
-
-
Vega, A.1
Campos, B.2
Bressac-De-Paillerets, B.3
Bond, P.M.4
Janin, N.5
Douglas, F.S.6
Domènech, M.7
Baena, M.8
Pericay, C.9
Alonso, C.10
-
22
-
-
84994201460
-
Sources of error in mammalian genetic screens
-
Sack, L.M., Davoli, T., Xu, Q., Li, M.Z., Elledge, S.J., Sources of error in mammalian genetic screens. G3 (Bethesda) 6 (2016), 2781–2790.
-
(2016)
G3 (Bethesda)
, vol.6
, pp. 2781-2790
-
-
Sack, L.M.1
Davoli, T.2
Xu, Q.3
Li, M.Z.4
Elledge, S.J.5
-
23
-
-
85054375843
-
Accurate classification of BRCA1 variants with saturation genome editing
-
Published online September 12, 2018
-
Findlay, G.M., Daza, R.M., Martin, B., Zhang, M.D., Leith, A.P., Gasperini, M., Janizek, J.D., Huang, X., Starita, L.M., Shendure, J., Accurate classification of BRCA1 variants with saturation genome editing. Nature, 562, 2018 Published online September 12, 2018 https://doi.org/0.1038/s41586-018-0461-z.
-
(2018)
Nature
, vol.562
-
-
Findlay, G.M.1
Daza, R.M.2
Martin, B.3
Zhang, M.D.4
Leith, A.P.5
Gasperini, M.6
Janizek, J.D.7
Huang, X.8
Starita, L.M.9
Shendure, J.10
-
24
-
-
84892698156
-
A rapid, efficient, and economical inverse polymerase chain reaction-based method for generating a site saturation mutant library
-
Jain, P.C., Varadarajan, R., A rapid, efficient, and economical inverse polymerase chain reaction-based method for generating a site saturation mutant library. Anal. Biochem. 449 (2014), 90–98.
-
(2014)
Anal. Biochem.
, vol.449
, pp. 90-98
-
-
Jain, P.C.1
Varadarajan, R.2
-
25
-
-
0034804672
-
Structure of a BRCA1-BARD1 heterodimeric RING-RING complex
-
Brzovic, P.S., Rajagopal, P., Hoyt, D.W., King, M.C., Klevit, R.E., Structure of a BRCA1-BARD1 heterodimeric RING-RING complex. Nat. Struct. Biol. 8 (2001), 833–837.
-
(2001)
Nat. Struct. Biol.
, vol.8
, pp. 833-837
-
-
Brzovic, P.S.1
Rajagopal, P.2
Hoyt, D.W.3
King, M.C.4
Klevit, R.E.5
-
26
-
-
80055092789
-
BRCA1 tumor suppression depends on BRCT phosphoprotein binding, but not its E3 ligase activity
-
Shakya, R., Reid, L.J., Reczek, C.R., Cole, F., Egli, D., Lin, C.-S., deRooij, D.G., Hirsch, S., Ravi, K., Hicks, J.B., et al. BRCA1 tumor suppression depends on BRCT phosphoprotein binding, but not its E3 ligase activity. Science 334 (2011), 525–528.
-
(2011)
Science
, vol.334
, pp. 525-528
-
-
Shakya, R.1
Reid, L.J.2
Reczek, C.R.3
Cole, F.4
Egli, D.5
Lin, C.-S.6
deRooij, D.G.7
Hirsch, S.8
Ravi, K.9
Hicks, J.B.10
-
27
-
-
58549098527
-
E3 ligase activity of BRCA1 is not essential for mammalian cell viability or homology-directed repair of double-strand DNA breaks
-
Reid, L.J., Shakya, R., Modi, A.P., Lokshin, M., Cheng, J.-T., Jasin, M., Baer, R., Ludwig, T., E3 ligase activity of BRCA1 is not essential for mammalian cell viability or homology-directed repair of double-strand DNA breaks. Proc. Natl. Acad. Sci. USA 105 (2008), 20876–20881.
-
(2008)
Proc. Natl. Acad. Sci. USA
, vol.105
, pp. 20876-20881
-
-
Reid, L.J.1
Shakya, R.2
Modi, A.P.3
Lokshin, M.4
Cheng, J.-T.5
Jasin, M.6
Baer, R.7
Ludwig, T.8
-
28
-
-
84991585415
-
Prospective functional classification of all possible missense variants in PPARG
-
Majithia, A.R., Tsuda, B., Agostini, M., Gnanapradeepan, K., Rice, R., Peloso, G., Patel, K.A., Zhang, X., Broekema, M.F., Patterson, N., et al. UK Monogenic Diabetes Consortium Myocardial Infarction Genetics Consortium, UK Congenital Lipodystrophy Consortium. Prospective functional classification of all possible missense variants in PPARG. Nat. Genet. 48 (2016), 1570–1575.
-
(2016)
Nat. Genet.
, vol.48
, pp. 1570-1575
-
-
Majithia, A.R.1
Tsuda, B.2
Agostini, M.3
Gnanapradeepan, K.4
Rice, R.5
Peloso, G.6
Patel, K.A.7
Zhang, X.8
Broekema, M.F.9
Patterson, N.10
-
29
-
-
84923848137
-
Massively parallel single-amino-acid mutagenesis
-
203–206, 4, 206
-
Kitzman, J.O., Starita, L.M., Lo, R.S., Fields, S., Shendure, J., Massively parallel single-amino-acid mutagenesis. Nat. Methods, 12, 2015 203–206, 4, 206.
-
(2015)
Nat. Methods
, vol.12
-
-
Kitzman, J.O.1
Starita, L.M.2
Lo, R.S.3
Fields, S.4
Shendure, J.5
-
30
-
-
0006713602
-
Identification of the breast cancer susceptibility gene BRCA2
-
Wooster, R., Bignell, G., Lancaster, J., Swift, S., Seal, S., Mangion, J., Collins, N., Gregory, S., Gumbs, C., Micklem, G., Identification of the breast cancer susceptibility gene BRCA2. Nature 378 (1995), 789–792.
-
(1995)
Nature
, vol.378
, pp. 789-792
-
-
Wooster, R.1
Bignell, G.2
Lancaster, J.3
Swift, S.4
Seal, S.5
Mangion, J.6
Collins, N.7
Gregory, S.8
Gumbs, C.9
Micklem, G.10
-
31
-
-
0035099044
-
BRCA2 is required for homology-directed repair of chromosomal breaks
-
Moynahan, M.E., Pierce, A.J., Jasin, M., BRCA2 is required for homology-directed repair of chromosomal breaks. Mol. Cell 7 (2001), 263–272.
-
(2001)
Mol. Cell
, vol.7
, pp. 263-272
-
-
Moynahan, M.E.1
Pierce, A.J.2
Jasin, M.3
-
32
-
-
84871997956
-
A classification model for BRCA2 DNA binding domain missense variants based on homology-directed repair activity
-
Guidugli, L., Pankratz, V.S., Singh, N., Thompson, J., Erding, C.A., Engel, C., Schmutzler, R., Domchek, S., Nathanson, K., Radice, P., et al. A classification model for BRCA2 DNA binding domain missense variants based on homology-directed repair activity. Cancer Res. 73 (2013), 265–275.
-
(2013)
Cancer Res.
, vol.73
, pp. 265-275
-
-
Guidugli, L.1
Pankratz, V.S.2
Singh, N.3
Thompson, J.4
Erding, C.A.5
Engel, C.6
Schmutzler, R.7
Domchek, S.8
Nathanson, K.9
Radice, P.10
-
33
-
-
85019115411
-
Associations between cancer predisposition testing panel genes and breast cancer
-
Couch, F.J., Shimelis, H., Hu, C., Hart, S.N., Polley, E.C., Na, J., Hallberg, E., Moore, R., Thomas, A., Lilyquist, J., et al. Associations between cancer predisposition testing panel genes and breast cancer. JAMA Oncol. 3 (2017), 1190–1196.
-
(2017)
JAMA Oncol.
, vol.3
, pp. 1190-1196
-
-
Couch, F.J.1
Shimelis, H.2
Hu, C.3
Hart, S.N.4
Polley, E.C.5
Na, J.6
Hallberg, E.7
Moore, R.8
Thomas, A.9
Lilyquist, J.10
-
34
-
-
84947046242
-
Functional analysis of BARD1 missense variants in homology-directed repair of DNA double strand breaks
-
Lee, C., Banerjee, T., Gillespie, J., Ceravolo, A., Parvinsmith, M.R., Starita, L.M., Fields, S., Toland, A.E., Parvin, J.D., Functional analysis of BARD1 missense variants in homology-directed repair of DNA double strand breaks. Hum. Mutat. 36 (2015), 1205–1214.
-
(2015)
Hum. Mutat.
, vol.36
, pp. 1205-1214
-
-
Lee, C.1
Banerjee, T.2
Gillespie, J.3
Ceravolo, A.4
Parvinsmith, M.R.5
Starita, L.M.6
Fields, S.7
Toland, A.E.8
Parvin, J.D.9
|