Mitochondrial dynamics and the ER: The plant perspective

Frontiers in Cell and Developmental Biology

Volumn 3, Issue DEC, 2015, Pages

  Mueller, Stefanie J ^a   Reski, Ralf ^a,b  

^a UNIVERSITY OF FREIBURG   (Germany)

^b UNIVERSITÉ DE STRASBOURG   (France)

Author keywords

Arabidopsis thaliana; Fission; Fusion; Organelle dynamics; Physcomitrella patens

Indexed keywords

EID: 85050079754     PISSN: None     EISSN: 2296634X     Source Type: Journal    
DOI: 10.3389/fcell.2015.00078     Document Type: Article

References (57)

1. Abel, W. O., Knebel, W., Koop, H.-U., Marienfeld, J. R., Quader, H., Reski, R., et al. (1989). A cytokinin-sensitive mutant of the moss Physcomitrella patens defective in chloroplast division. Protoplasma 152, 1-13. doi: 10.1007/BF01354234
2. Andersson, M. X., Goksör, M., and Sandelius, A. S. (2007). Optical manipulation reveals strong attracting forces at membrane contact sites between endoplasmic reticulum and chloroplasts. J. Biol. Chem. 282, 1170-1174. doi: 10.1074/jbc.M608124200
3. Arimura, S., Fujimoto, M., Doniwa, Y., Kadoya, N., Nakazono, M., Sakamoto, W., et al. (2008). Arabidopsis ELONGATED MITOCHONDRIA1 is required for localization of DYNAMIN-RELATED PROTEIN3A to mitochondrial fission sites. Plant Cell 20, 1555-1566. doi: 10.1105/tpc.108.058578
4. Arimura, S., Yamamoto, J., Aida, G. P., Nakazono, M., and Tsutsumi, N. (2004). Frequent fusion and fission of plant mitochondria with unequal nucleoid distribution. Proc. Natl. Acad. Sci. U.S.A. 101, 7805-7808. doi: 10.1073/pnas.0401077101
5. Candat, A., Paszkiewicz, G., Neveu, M., Gautier, R., Logan, D. C., Avelange-Macherel, M. H., et al. (2014). The ubiquitous distribution of late embryogenesis abundant proteins across cell compartments in Arabidopsis offers tailored protection against abiotic stress. Plant Cell 26, 3148-3166. doi: 10.1105/tpc.114.127316
6. de Brito, O. M., and Scorrano, L. (2008). Mitofusin 2 tethers endoplasmic reticulum to mitochondria. Nature 456, 605-610. doi: 10.1038/nature07534
7. de Chaumont, F., Dallongeville, S., Chenouard, N., Hervé, N., Pop, S., Provoost, T., et al. (2012). Icy: an open bioimage informatics platform for extended reproducible research. Nat. Methods 9, 690-696. doi: 10.1038/nmeth.2075
8. Duncan, O., Murcha, M. W., and Whelan, J. (2013). Unique components of the plant mitochondrial protein import apparatus. Biochim. Biophys. Acta 1833, 304-313. doi: 10.1016/j.bbamcr.2012.02.015
9. Elgass, K., Pakay, J., Ryan, M. T., and Palmer, C. S. (2013). Recent advances into the understanding of mitochondrial fission. Biochim. Biophys. Acta 1833, 150-161. doi: 10.1016/j.bbamcr.2012.05.002
10. El Zawily, A. M., Schwarzländer, M., Finkemeier, I., Johnston, I. G., Benamar, A., Cao, Y., et al. (2014). FRIENDLY regulates mitochondrial distribution, fusion, and quality control in Arabidopsis. Plant Physiol. 166, 808-828. doi: 10.1104/pp.114.243824
11. Friedman, J. R., Lackner, L. L., West, M., DiBenedetto, J. R., Nunnari, J., and Voeltz, G. K. (2011). ER tubules mark sites of mitochondrial division. Science 334, 358-362. doi: 10.1126/science.1207385
12. Fujimoto, M., Arimura, S., Mano, S., Kondo, M., Saito, C., Ueda, T., et al. (2009). Arabidopsis dynamin-related proteins DRP3A and DRP3B are functionally redundant in mitochondrial fission, but have distinct roles in peroxisomal fission. Plant J. Cell Mol. Biol. 58, 388-400. doi: 10.1111/j.1365-313X.2009.03786.x
13. Furt, F., Lemoi, K., Tüzel, E., and Vidali, L. (2012). Quantitative analysis of organelle distribution and dynamics in Physcomitrella patens protonemal cells. BMC Plant Biol. 12:70. doi: 10.1186/1471-2229-12-70
14. Gao, H., Sage, T. L., and Osteryoung, K. W. (2006). FZL, an FZO-like protein in plants, is a determinant of thylakoid and chloroplast morphology. Proc. Natl. Acad. Sci. U.S.A. 103, 6759-6764. doi: 10.1073/pnas.0507287103
15. Gao, J., Schatton, D., Martinelli, P., Hansen, H., Pla-Martin, D., Barth, E., et al. (2014). CLUH regulates mitochondrial biogenesis by binding mRNAs of nuclear-encoded mitochondrial proteins. J. Cell Biol. 207, 213-223. doi: 10.1083/jcb.201403129
16. Hohe, A., Egener, T., Lucht, J. M., Holtorf, H., Reinhard, C., Schween, G., et al. (2004). An improved and highly standardised transformation procedure allows efficient production of single and multiple targeted gene-knockouts in a moss, Physcomitrella patens. Curr. Genet. 44, 339-347. doi: 10.1007/s00294-003-0458-4
17. Katajisto, P., Döhla, J., Chaffer, C. L., Pentinmikko, N., Marjanovic, N., Iqbal, S., et al. (2015). Asymmetric apportioning of aged mitochondria between daughter cells is required for stemness. Science 348, 340-343. doi: 10.1126/science.1260384
18. Kornmann, B. (2013). The molecular hug between the ER and the mitochondria. Curr. Opin. Cell Biol. 25, 443-448. doi: 10.1016/j.ceb.2013.02.010
19. Kubo, M., Imai, A., Nishiyama, T., Ishikawa, M., Sato, Y., Kurata, T., et al. (2013). System for stable β-Estradiol-inducible gene expression in the moss Physcomitrella patens. PLoS ONE 8:e77356. doi: 10.1371/journal.pone.0077356
20. Labbé, K., Murley, A., and Nunnari, J. (2014). Determinants and functions of mitochondrial behavior. Annu. Rev. Cell Dev. Biol. 30, 357-391. doi: 10.1146/annurev-cellbio-101011-155756
21. Lackner, L. L. (2014). Shaping the dynamic mitochondrial network. BMC Biol. 12:35. doi: 10.1186/1741-7007-12-35
22. Liu, X., Weaver, D., Shirihai, O., and Hajnóczky, G. (2009). Mitochondrial 'kiss-and-run': interplay between mitochondrial motility and fusion-fission dynamics. EMBO J. 28, 3074-3089. doi: 10.1038/emboj.2009.255
23. Logan, D. C. (2006). Plant mitochondrial dynamics. Biochim. Biophys. Acta 1763, 430-441. doi: 10.1016/j.bbamcr.2006.01.003
24. Logan, D. C. (2010). Mitochondrial fusion, division and positioning in plants. Biochem. Soc. Trans. 38, 789-795. doi: 10.1042/BST0380789
25. Logan, D. C., and Leaver, C. J. (2000). Mitochondria-targeted GFP highlights the heterogeneity of mitochondrial shape, size and movement within living plant cells. J. Exp. Bot. 51, 865-871. doi: 10.1093/jexbot/51.346.865
26. Manders, E. M. M., Verbeek, F. J., and Aten, J. A. (1993). Measurement of co-localization of objects in dual-colour confocal images. J. Microsc. 169, 375-382. doi: 10.1111/j.1365-2818.1993.tb03313.x
27. Mathur, J., Radhamony, R., Sinclair, A. M., Donoso, A., Dunn, N., Roach, E., et al. (2010). mEosFP-based green-to-red photoconvertible subcellular probes for plants. Plant Physiol. 154, 1573-1587. doi: 10.1104/pp.110.165431
28. Mehrshahi, P., Johnny, C., and DellaPenna, D. (2014). Redefining the metabolic continuity of chloroplasts and ER. Trends Plant Sci. 19, 501-507. doi: 10.1016/j.tplants.2014.02.013
29. Mehrshahi, P., Stefano, G., Andaloro, J. M., Brandizzi, F., Froehlich, J. E., and Dellapenna, D. (2013). Transorganellar complementation redefines the biochemical continuity of endoplasmic reticulum and chloroplasts. Proc. Natl. Acad. Sci. U.S.A. 110, 12126-12131. doi: 10.1073/pnas.1306331110
30. Millar, A. H., Small, I. D., Day, D. A., and Whelan, J. (2008). Mitochondrial biogenesis and function in Arabidopsis. Arab. Book Am. Soc. Plant Biol. 6:e0111. doi: 10.1199/tab.0111
31. Mueller, S. J., Lang, D., Hoernstein, S. N., Lang, E. G., Schuessele, C., Schmidt, A., et al. (2014). Quantitative analysis of the mitochondrial and plastid proteomes of the moss Physcomitrella patens reveals protein macrocompartmentation and microcompartmentation. Plant Physiol. 164, 2081-2095. doi: 10.1104/pp.114.235754
32. Müller, S. J., Gütle, D. D., Jacquot, J.-P., and Reski, R. (2015). Can mosses serve as model organisms for forest research? Ann. For. Sci. doi: 10.1007/s13595-015-0468-7. [Epub ahead of print]
33. Narendra, D., Walker, J. E., and Youle, R. (2012). Mitochondrial quality control mediated by PINK1 and Parkin: Links to parkinsonism. Cold Spring Harb. Perspect. Biol. 4:a011338. doi: 10.1101/cshperspect.a011338
34. Pressel, S., Ligrone, R., and Duckett, J. G. (2008). Cellular differentiation in moss protonemata: a morphological and experimental study. Ann. Bot. 102, 227-245. doi: 10.1093/aob/mcn080
35. Prinz, W. A. (2014). Bridging the gap: membrane contact sites in signaling, metabolism, and organelle dynamics. J. Cell Biol. 205, 759-769. doi: 10.1083/jcb.201401126
36. Rambold, A. S., Cohen, S., and Lippincott-Schwartz, J. (2015). Fatty acid trafficking in starved cells: regulation by lipid droplet lipolysis, autophagy, and mitochondrial fusion dynamics. Dev. Cell 32, 678-692. doi: 10.1016/j.devcel.2015.01.029
37. Rowland, A. A., and Voeltz, G. K. (2012). Endoplasmic reticulum-mitochondria contacts: function of the junction. Nat. Rev. Mol. Cell Biol. 13, 607-625. doi: 10.1038/nrm3440
38. Schaaf, A., Reski, R., and Decker, E. L. (2004). A novel aspartic proteinase is targeted to the secretory pathway and to the vacuole in the moss Physcomitrella patens. Eur. J. Cell Biol. 83, 145-152. doi: 10.1078/0171-9335-00371
39. Scott, I., and Logan, D. C. (2008). Mitochondrial morphology transition is an early indicator of subsequent cell death in Arabidopsis. New Phytol. 177, 90-101. doi: 10.1111/j.1469-8137.2007.02255.x
40. Scott, I., and Logan, D. C. (2011). 'Mitochondrial dynamics,' in Plant Mitochondria, ed F. Kempken (New York, NY: Springer New York), 31-63
41. Scott, I., Tobin, A. K., and Logan, D. C. (2006). BIGYIN, an orthologue of human and yeast FIS1 genes functions in the control of mitochondrial size and number in Arabidopsis thaliana. J. Exp. Bot. 57, 1275-1280. doi: 10.1093/jxb/erj096
42. Sheahan, M. B., McCurdy, D. W., and Rose, R. J. (2005). Mitochondria as a connected population: ensuring continuity of the mitochondrial genome during plant cell dedifferentiation through massive mitochondrial fusion. Plant J. Cell Mol. Biol. 44, 744-755. doi: 10.1111/j.1365-313X.2005.02561.x
43. Sparkes, I. A., Frigerio, L., Tolley, N., and Hawes, C. (2009). The plant endoplasmic reticulum: a cell-wide web. Biochem. J. 423, 145-155. doi: 10.1042/BJ20091113
44. Staehelin, L. A. (1997). The plant ER: a dynamic organelle composed of a large number of discrete functional domains. Plant J. Cell Mol. Biol. 11, 1151-1165. doi: 10.1046/j.1365-313X.1997.11061151.x
45. Stefano, G., Hawes, C., and Brandizzi, F. (2014a). ER-the key to the highway. Curr. Opin. Plant Biol. 22C, 30-38. doi: 10.1016/j.pbi.2014.09.001
46. Stefano, G., Renna, L., and Brandizzi, F. (2014b). The endoplasmic reticulum exerts control over organelle streaming during cell expansion. J. Cell Sci. 127, 947-953. doi: 10.1242/jcs.139907
47. Strepp, R., Scholz, S., Kruse, S., Speth, V., and Reski, R. (1998). Plant nuclear gene knockout reveals a role in plastid division for the homolog of the bacterial cell division protein FtsZ, an ancestral tubulin. Proc. Natl. Acad. Sci. U.S.A. 95, 4368-4373. doi: 10.1073/pnas.95.8.4368
48. Tian, G. W., Mohanty, A., Chary, S. N., Li, S., Paap, B., Drakakaki, G., et al. (2004). High-throughput fluorescent tagging of full-length Arabidopsis gene products in planta. Plant Physiol. 135, 25-38. doi: 10.1104/pp.104.040139
49. Tolleter, D., Hincha, D. K., and Macherel, D. (2010). A mitochondrial late embryogenesis abundant protein stabilizes model membranes in the dry state. Biochim. Biophys. Acta 1798, 1926-1933. doi: 10.1016/j.bbamem.2010.06.029
50. Twig, G., Elorza, A., Molina, A. J. A., Mohamed, H., Wikstrom, J. D., Walzer, G., et al. (2008a). Fission and selective fusion govern mitochondrial segregation and elimination by autophagy. EMBO J. 27, 433-446. doi: 10.1038/sj.emboj.7601963
51. Twig, G., Hyde, B., and Shirihai, O. S. (2008b). Mitochondrial fusion, fission and autophagy as a quality control axis: the bioenergetic view. Biochim. Biophys. Acta 1777, 1092-1097. doi: 10.1016/j.bbabio.2008.05.001
52. Van Gestel, K., Köhler, R. H., and Verbelen, J. P. (2002). Plant mitochondria move on F-actin, but their positioning in the cortical cytoplasm depends on both F-actin and microtubules. J. Exp. Bot. 53, 659-667. doi: 10.1093/jexbot/53.369.659
53. Vidali, L., and Bezanilla, M. (2012). Physcomitrella patens: a model for tip cell growth and differentiation. Curr. Opin. Plant Biol. 15, 625-631. doi: 10.1016/j.pbi.2012.09.008
54. Weise, A., Rodriguez-Franco, M., Timm, B., Hermann, M., Link, S., Jost, W., et al. (2006). Use of Physcomitrella patens actin 5' regions for high transgene expression: Importance of 5' introns. Appl. Microbiol. Biotechnol. 70, 337-345. doi: 10.1007/s00253-005-0087-6
55. Welchen, E., García, L., Mansilla, N., and Gonzalez, D. H. (2014). Coordination of plant mitochondrial biogenesis: keeping pace with cellular requirements. Front. Plant Sci. 4:551. doi: 10.3389/fpls.2013.00551
56. Wiedenmann, J., Ivanchenko, S., Oswald, F., Schmitt, F., Röcker, C., Salih, A., et al. (2004). EosFP, a fluorescent marker protein with UV-inducible green-to-red fluorescence conversion. Proc. Natl. Acad. Sci. U.S.A. 101, 15905-15910. doi: 10.1073/pnas.0403668101
57. Zhang, X. C., and Hu, J. P. (2008). FISSION1A and FISSION1B proteins mediate the fission of peroxisomes and mitochondria in Arabidopsis. Mol. Plant 1, 1036-1047. doi: 10.1093/mp/ssn056