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Volumn 9, Issue JUL, 2018, Pages

Intestinal microbiota disruption reduces regulatory T cells and increases respiratory viral infection mortality through increased IFNγ production

Author keywords

Gastrointestinal microbiome; Innate lymphoid cells; Pulmonary immune response; Pulmonary microbiome; Respiratory infection; Virus

Indexed keywords

GAMMA INTERFERON; INTERLEUKIN 6; RNA 16S; STREPTOMYCIN;

EID: 85049830838     PISSN: None     EISSN: 16643224     Source Type: Journal    
DOI: 10.3389/fimmu.2018.01587     Document Type: Article
Times cited : (53)

References (70)
  • 1
    • 84858376593 scopus 로고    scopus 로고
    • The impact of the gut microbiota on human health: an integrative view
    • Clemente JC, Ursell LK, Parfrey LW, Knight R. The impact of the gut microbiota on human health: an integrative view. Cell (2012) 148(6):1258-70. doi:10.1016/j.cell.2012.01.035
    • (2012) Cell , vol.148 , Issue.6 , pp. 1258-1270
    • Clemente, J.C.1    Ursell, L.K.2    Parfrey, L.W.3    Knight, R.4
  • 2
    • 74049122536 scopus 로고    scopus 로고
    • Enteric defensins are essential regulators of intestinal microbial ecology
    • Salzman NH, Hung K, Haribhai D, Chu H, Karlsson-Sjoberg J, Amir E, et al. Enteric defensins are essential regulators of intestinal microbial ecology. Nat Immunol (2010) 11(1):76-83. doi:10.1038/ni.1825
    • (2010) Nat Immunol , vol.11 , Issue.1 , pp. 76-83
    • Salzman, N.H.1    Hung, K.2    Haribhai, D.3    Chu, H.4    Karlsson-Sjoberg, J.5    Amir, E.6
  • 3
    • 70349742524 scopus 로고    scopus 로고
    • The key role of segmented filamentous bacteria in the coordinated maturation of gut helper T cell responses
    • Gaboriau-Routhiau V, Rakotobe S, Lecuyer E, Mulder I, Lan A, Bridonneau C, et al. The key role of segmented filamentous bacteria in the coordinated maturation of gut helper T cell responses. Immunity (2009) 31(4):677-89. doi:10.1016/j.immuni.2009.08.020
    • (2009) Immunity , vol.31 , Issue.4 , pp. 677-689
    • Gaboriau-Routhiau, V.1    Rakotobe, S.2    Lecuyer, E.3    Mulder, I.4    Lan, A.5    Bridonneau, C.6
  • 4
    • 70350343544 scopus 로고    scopus 로고
    • Induction of intestinal Th17 cells by segmented filamentous bacteria
    • Ivanov II, Atarashi K, Manel N, Brodie EL, Shima T, Karaoz U, et al. Induction of intestinal Th17 cells by segmented filamentous bacteria. Cell (2009) 139(3):485-98. doi:10.1016/j.cell.2009.09.033
    • (2009) Cell , vol.139 , Issue.3 , pp. 485-498
    • Ivanov, I.I.1    Atarashi, K.2    Manel, N.3    Brodie, E.L.4    Shima, T.5    Karaoz, U.6
  • 5
    • 79952748674 scopus 로고    scopus 로고
    • Proinflammatory T-cell responses to gut microbiota promote experimental autoimmune encephalomyelitis
    • Lee YK, Menezes JS, Umesaki Y, Mazmanian SK. Proinflammatory T-cell responses to gut microbiota promote experimental autoimmune encephalomyelitis. Proc Natl Acad Sci U S A (2011) 108(Suppl 1):4615-22. doi:10.1073/pnas.1000082107
    • (2011) Proc Natl Acad Sci U S A , vol.108 , pp. 4615-4622
    • Lee, Y.K.1    Menezes, J.S.2    Umesaki, Y.3    Mazmanian, S.K.4
  • 6
    • 77953913586 scopus 로고    scopus 로고
    • Gut-residing segmented filamentous bacteria drive autoimmune arthritis via T helper 17 cells
    • Wu HJ, Ivanov II, Darce J, Hattori K, Shima T, Umesaki Y, et al. Gut-residing segmented filamentous bacteria drive autoimmune arthritis via T helper 17 cells. Immunity (2010) 32(6):815-27. doi:10.1016/j.immuni.2010.06.001
    • (2010) Immunity , vol.32 , Issue.6 , pp. 815-827
    • Wu, H.J.1    Ivanov, I.I.2    Darce, J.3    Hattori, K.4    Shima, T.5    Umesaki, Y.6
  • 7
    • 85027947787 scopus 로고    scopus 로고
    • Induction of colonic regulatory T cells by indigenous Clostridium species
    • Atarashi K, Tanoue T, Shima T, Imaoka A, Kuwahara T, Momose Y, et al. Induction of colonic regulatory T cells by indigenous Clostridium species. Science (2011) 331(6015):337-41. doi:10.1126/science.1198469
    • (2011) Science , vol.331 , Issue.6015 , pp. 337-341
    • Atarashi, K.1    Tanoue, T.2    Shima, T.3    Imaoka, A.4    Kuwahara, T.5    Momose, Y.6
  • 8
    • 80054020840 scopus 로고    scopus 로고
    • Peripheral education of the immune system by colonic commensal microbiota
    • Lathrop SK, Bloom SM, Rao SM, Nutsch K, Lio CW, Santacruz N, et al. Peripheral education of the immune system by colonic commensal microbiota. Nature (2011) 478(7368):250-4. doi:10.1038/nature10434
    • (2011) Nature , vol.478 , Issue.7368 , pp. 250-254
    • Lathrop, S.K.1    Bloom, S.M.2    Rao, S.M.3    Nutsch, K.4    Lio, C.W.5    Santacruz, N.6
  • 9
    • 77954738601 scopus 로고    scopus 로고
    • Inducible Foxp3+ regulatory T-cell development by a commensal bacterium of the intestinal microbiota
    • Round JL, Mazmanian SK. Inducible Foxp3+ regulatory T-cell development by a commensal bacterium of the intestinal microbiota. Proc Natl Acad Sci U S A (2010) 107(27):12204-9. doi:10.1073/pnas.0909122107
    • (2010) Proc Natl Acad Sci U S A , vol.107 , Issue.27 , pp. 12204-12209
    • Round, J.L.1    Mazmanian, S.K.2
  • 10
    • 77953904042 scopus 로고    scopus 로고
    • Virus-plus-susceptibility gene interaction determines Crohn's disease gene Atg16L1 phenotypes in intestine
    • Cadwell K, Patel KK, Maloney NS, Liu TC, Ng AC, Storer CE, et al. Virus-plus-susceptibility gene interaction determines Crohn's disease gene Atg16L1 phenotypes in intestine. Cell (2010) 141(7):1135-45. doi:10.1016/j.cell.2010.05.009
    • (2010) Cell , vol.141 , Issue.7 , pp. 1135-1145
    • Cadwell, K.1    Patel, K.K.2    Maloney, N.S.3    Liu, T.C.4    Ng, A.C.5    Storer, C.E.6
  • 11
    • 54549122338 scopus 로고    scopus 로고
    • Innate immunity and intestinal microbiota in the development of type 1 diabetes
    • Wen L, Ley RE, Volchkov PY, Stranges PB, Avanesyan L, Stonebraker AC, et al. Innate immunity and intestinal microbiota in the development of type 1 diabetes. Nature (2008) 455(7216):1109-13. doi:10.1038/nature07336
    • (2008) Nature , vol.455 , Issue.7216 , pp. 1109-1113
    • Wen, L.1    Ley, R.E.2    Volchkov, P.Y.3    Stranges, P.B.4    Avanesyan, L.5    Stonebraker, A.C.6
  • 12
    • 33845874101 scopus 로고    scopus 로고
    • An obesity-associated gut microbiome with increased capacity for energy harvest
    • Turnbaugh PJ, Ley RE, Mahowald MA, Magrini V, Mardis ER, Gordon JI. An obesity-associated gut microbiome with increased capacity for energy harvest. Nature (2006) 444(7122):1027-31. doi:10.1038/nature05414
    • (2006) Nature , vol.444 , Issue.7122 , pp. 1027-1031
    • Turnbaugh, P.J.1    Ley, R.E.2    Mahowald, M.A.3    Magrini, V.4    Mardis, E.R.5    Gordon, J.I.6
  • 13
    • 79958154014 scopus 로고    scopus 로고
    • Fecal microbiota in premature infants prior to necrotizing enterocolitis
    • Mai V, Young CM, Ukhanova M, Wang X, Sun Y, Casella G, et al. Fecal microbiota in premature infants prior to necrotizing enterocolitis. PLoS One (2011) 6(6):e20647. doi:10.1371/journal.pone.0020647
    • (2011) PLoS One , vol.6 , Issue.6
    • Mai, V.1    Young, C.M.2    Ukhanova, M.3    Wang, X.4    Sun, Y.5    Casella, G.6
  • 14
    • 4344632902 scopus 로고    scopus 로고
    • Early intestinal bacterial colonization and necrotizing enterocolitis in premature infants: the putative role of Clostridium
    • de la Cochetiere MF, Piloquet H, des Robert C, Darmaun D, Galmiche JP, Roze JC. Early intestinal bacterial colonization and necrotizing enterocolitis in premature infants: the putative role of Clostridium. Pediatr Res (2004) 56(3):366-70. doi:10.1203/01.PDR.0000134251.45878.D5
    • (2004) Pediatr Res , vol.56 , Issue.3 , pp. 366-370
    • de la Cochetiere, M.F.1    Piloquet, H.2    des Robert, C.3    Darmaun, D.4    Galmiche, J.P.5    Roze, J.C.6
  • 15
    • 84862615466 scopus 로고    scopus 로고
    • Equilibria of humans and our indigenous microbiota affecting asthma
    • Blaser MJ. Equilibria of humans and our indigenous microbiota affecting asthma. Proc Am Thorac Soc (2012) 9(2):69-71. doi:10.1513/pats.201108-048MS
    • (2012) Proc Am Thorac Soc , vol.9 , Issue.2 , pp. 69-71
    • Blaser, M.J.1
  • 16
    • 35148856682 scopus 로고    scopus 로고
    • The role of the intestinal microbiota in the development of atopic disorders
    • Penders J, Stobberingh EE, van den Brandt PA, Thijs C. The role of the intestinal microbiota in the development of atopic disorders. Allergy (2007) 62(11):1223-36. doi:10.1111/j.1398-9995.2007.01462.x
    • (2007) Allergy , vol.62 , Issue.11 , pp. 1223-1236
    • Penders, J.1    Stobberingh, E.E.2    van den Brandt, P.A.3    Thijs, C.4
  • 17
    • 84860436361 scopus 로고    scopus 로고
    • Early life antibiotic-driven changes in microbiota enhance susceptibility to allergic asthma
    • Russell SL, Gold MJ, Hartmann M, Willing BP, Thorson L, Wlodarska M, et al. Early life antibiotic-driven changes in microbiota enhance susceptibility to allergic asthma. EMBO Rep (2012) 13(5):440-7. doi:10.1038/embor.2012.32
    • (2012) EMBO Rep , vol.13 , Issue.5 , pp. 440-447
    • Russell, S.L.1    Gold, M.J.2    Hartmann, M.3    Willing, B.P.4    Thorson, L.5    Wlodarska, M.6
  • 18
    • 80051570891 scopus 로고    scopus 로고
    • Dysregulation of allergic airway inflammation in the absence of microbial colonization
    • Herbst T, Sichelstiel A, Schar C, Yadava K, Burki K, Cahenzli J, et al. Dysregulation of allergic airway inflammation in the absence of microbial colonization. Am J Respir Crit Care Med (2011) 184(2):198-205. doi:10.1164/rccm.201010-1574OC
    • (2011) Am J Respir Crit Care Med , vol.184 , Issue.2 , pp. 198-205
    • Herbst, T.1    Sichelstiel, A.2    Schar, C.3    Yadava, K.4    Burki, K.5    Cahenzli, J.6
  • 19
    • 67650076454 scopus 로고    scopus 로고
    • Prolonged impact of antibiotics on intestinal microbial ecology and susceptibility to enteric Salmonella infection
    • Croswell A, Amir E, Teggatz P, Barman M, Salzman NH. Prolonged impact of antibiotics on intestinal microbial ecology and susceptibility to enteric Salmonella infection. Infect Immun (2009) 77(7):2741-53. doi:10.1128/IAI.00006-09
    • (2009) Infect Immun , vol.77 , Issue.7 , pp. 2741-2753
    • Croswell, A.1    Amir, E.2    Teggatz, P.3    Barman, M.4    Salzman, N.H.5
  • 20
    • 35348961403 scopus 로고    scopus 로고
    • An ecological and evolutionary perspective on human-microbe mutualism and disease
    • Dethlefsen L, McFall-Ngai M, Relman DA. An ecological and evolutionary perspective on human-microbe mutualism and disease. Nature (2007) 449(7164):811-8. doi:10.1038/nature06245
    • (2007) Nature , vol.449 , Issue.7164 , pp. 811-818
    • Dethlefsen, L.1    McFall-Ngai, M.2    Relman, D.A.3
  • 21
    • 0001354030 scopus 로고
    • Enhanced susceptibility to Salmonella infection in streptomycin-treated mice
    • BohnhoffM, Miller CP. Enhanced susceptibility to Salmonella infection in streptomycin-treated mice. J Infect Dis (1962) 111:117-27. doi:10.1093/infdis/111.2.117
    • (1962) J Infect Dis , vol.111 , pp. 117-127
    • Bohnhoff, M.1    Miller, C.P.2
  • 22
    • 0025336291 scopus 로고
    • Evidence for the translocation of Enterococcus faecalis across the mouse intestinal tract
    • Wells CL, Jechorek RP, Erlandsen SL. Evidence for the translocation of Enterococcus faecalis across the mouse intestinal tract. J Infect Dis (1990) 162(1):82-90. doi:10.1093/infdis/162.1.82
    • (1990) J Infect Dis , vol.162 , Issue.1 , pp. 82-90
    • Wells, C.L.1    Jechorek, R.P.2    Erlandsen, S.L.3
  • 23
    • 0023627544 scopus 로고
    • Role of anaerobic flora in the translocation of aerobic and facultatively anaerobic intestinal bacteria
    • Wells CL, Maddaus MA, Reynolds CM, Jechorek RP, Simmons RL. Role of anaerobic flora in the translocation of aerobic and facultatively anaerobic intestinal bacteria. Infect Immun (1987) 55(11):2689-94
    • (1987) Infect Immun , vol.55 , Issue.11 , pp. 2689-2694
    • Wells, C.L.1    Maddaus, M.A.2    Reynolds, C.M.3    Jechorek, R.P.4    Simmons, R.L.5
  • 24
    • 0018075343 scopus 로고
    • Role of Clostridium difficile in antibiotic-associated pseudomembranous colitis
    • Bartlett JG, Moon N, Chang TW, Taylor N, Onderdonk AB. Role of Clostridium difficile in antibiotic-associated pseudomembranous colitis. Gastroenterology (1978) 75(5):778-82
    • (1978) Gastroenterology , vol.75 , Issue.5 , pp. 778-782
    • Bartlett, J.G.1    Moon, N.2    Chang, T.W.3    Taylor, N.4    Onderdonk, A.B.5
  • 25
    • 0031958706 scopus 로고    scopus 로고
    • Clostridium difficile infection
    • Kelly CP, LaMont JT. Clostridium difficile infection. Annu Rev Med (1998) 49:375-90. doi:10.1146/annurev.med.49.1.375
    • (1998) Annu Rev Med , vol.49 , pp. 375-390
    • Kelly, C.P.1    LaMont, J.T.2
  • 26
    • 0034727835 scopus 로고    scopus 로고
    • Effect of antibiotic therapy on the density of vancomycin-resistant enterococci in the stool of colonized patients
    • Donskey CJ, Chowdhry TK, Hecker MT, Hoyen CK, Hanrahan JA, Hujer AM, et al. Effect of antibiotic therapy on the density of vancomycin-resistant enterococci in the stool of colonized patients. N Engl J Med (2000) 343(26):1925-32. doi:10.1056/NEJM200012283432604
    • (2000) N Engl J Med , vol.343 , Issue.26 , pp. 1925-1932
    • Donskey, C.J.1    Chowdhry, T.K.2    Hecker, M.T.3    Hoyen, C.K.4    Hanrahan, J.A.5    Hujer, A.M.6
  • 27
    • 84873570579 scopus 로고    scopus 로고
    • American Journal of Gastroenterology Lecture: intestinal microbiota and the role of fecal microbiota transplant (FMT) in treatment of C. difficile infection
    • Brandt LJ. American Journal of Gastroenterology Lecture: intestinal microbiota and the role of fecal microbiota transplant (FMT) in treatment of C. difficile infection. Am J Gastroenterol (2013) 108(2):177-85. doi:10.1038/ajg.2012.450
    • (2013) Am J Gastroenterol , vol.108 , Issue.2 , pp. 177-185
    • Brandt, L.J.1
  • 28
    • 84994469092 scopus 로고    scopus 로고
    • Effect of fecal microbiota transplantation on recurrence in multiply recurrent Clostridium difficile infection: a randomized trial
    • Kelly CR, Khoruts A, Staley C, Sadowsky MJ, Abd M, Alani M, et al. Effect of fecal microbiota transplantation on recurrence in multiply recurrent Clostridium difficile infection: a randomized trial. Ann Intern Med (2016) 165(9):609-16. doi:10.7326/M16-0271
    • (2016) Ann Intern Med , vol.165 , Issue.9 , pp. 609-616
    • Kelly, C.R.1    Khoruts, A.2    Staley, C.3    Sadowsky, M.J.4    Abd, M.5    Alani, M.6
  • 29
    • 79955121049 scopus 로고    scopus 로고
    • Microbiota regulates immune defense against respiratory tract influenza A virus infection
    • Ichinohe T, Pang IK, Kumamoto Y, Peaper DR, Ho JH, Murray TS, et al. Microbiota regulates immune defense against respiratory tract influenza A virus infection. Proc Natl Acad Sci U S A (2011) 108(13):5354-9. doi:10.1073/pnas.1019378108
    • (2011) Proc Natl Acad Sci U S A , vol.108 , Issue.13 , pp. 5354-5359
    • Ichinohe, T.1    Pang, I.K.2    Kumamoto, Y.3    Peaper, D.R.4    Ho, J.H.5    Murray, T.S.6
  • 30
    • 84892562813 scopus 로고    scopus 로고
    • House dust exposure mediates gut microbiome Lactobacillus enrichment and airway immune defense against allergens and virus infection
    • Fujimura KE, Demoor T, Rauch M, Faruqi AA, Jang S, Johnson CC, et al. House dust exposure mediates gut microbiome Lactobacillus enrichment and airway immune defense against allergens and virus infection. Proc Natl Acad Sci U S A (2014) 111(2):805-10. doi:10.1073/pnas.1310750111
    • (2014) Proc Natl Acad Sci U S A , vol.111 , Issue.2 , pp. 805-810
    • Fujimura, K.E.1    Demoor, T.2    Rauch, M.3    Faruqi, A.A.4    Jang, S.5    Johnson, C.C.6
  • 31
    • 35748966169 scopus 로고    scopus 로고
    • Induction of high-affinity IgE receptor on lung dendritic cells during viral infection leads to mucous cell metaplasia
    • Grayson MH, Cheung D, Rohlfing MM, Kitchens R, Spiegel DE, Tucker J, et al. Induction of high-affinity IgE receptor on lung dendritic cells during viral infection leads to mucous cell metaplasia. J Exp Med (2007) 204(11):2759-69. doi:10.1084/jem.20070360
    • (2007) J Exp Med , vol.204 , Issue.11 , pp. 2759-2769
    • Grayson, M.H.1    Cheung, D.2    Rohlfing, M.M.3    Kitchens, R.4    Spiegel, D.E.5    Tucker, J.6
  • 32
    • 78149481931 scopus 로고    scopus 로고
    • Cutting edge: CD49d+ neutrophils induce FcepsilonRI expression on lung dendritic cells in a mouse model of postviral asthma
    • Cheung DS, Ehlenbach SJ, Kitchens RT, Riley DA, Thomas LL, Holtzman MJ, et al. Cutting edge: CD49d+ neutrophils induce FcepsilonRI expression on lung dendritic cells in a mouse model of postviral asthma. J Immunol (2010) 185(9):4983-7. doi:10.4049/jimmunol.1002456
    • (2010) J Immunol , vol.185 , Issue.9 , pp. 4983-4987
    • Cheung, D.S.1    Ehlenbach, S.J.2    Kitchens, R.T.3    Riley, D.A.4    Thomas, L.L.5    Holtzman, M.J.6
  • 33
    • 0036070857 scopus 로고    scopus 로고
    • Viral induction of a chronic asthma phenotype and genetic segregation from the acute response
    • Walter MJ, Morton JD, Kajiwara N, Agapov E, Holtzman MJ. Viral induction of a chronic asthma phenotype and genetic segregation from the acute response. J Clin Invest (2002) 110(2):165-75. doi:10.1172/JCI0214345
    • (2002) J Clin Invest , vol.110 , Issue.2 , pp. 165-175
    • Walter, M.J.1    Morton, J.D.2    Kajiwara, N.3    Agapov, E.4    Holtzman, M.J.5
  • 34
    • 85040679730 scopus 로고    scopus 로고
    • Cysteinyl leukotriene receptor 1 expression identifies a subset of neutrophils during the antiviral response that contributes to postviral atopic airway disease
    • Cheung DS, Sigua JA, Simpson PM, Yan K, Hussain SA, Santoro JL, et al. Cysteinyl leukotriene receptor 1 expression identifies a subset of neutrophils during the antiviral response that contributes to postviral atopic airway disease. J Allergy Clin Immunol (2017). doi:10.1016/j.jaci.2017.11.026
    • (2017) J Allergy Clin Immunol
    • Cheung, D.S.1    Sigua, J.A.2    Simpson, P.M.3    Yan, K.4    Hussain, S.A.5    Santoro, J.L.6
  • 35
    • 0032100720 scopus 로고    scopus 로고
    • Virus-specific CD8+ T cells in primary and secondary influenza pneumonia
    • Flynn KJ, Belz GT, Altman JD, Ahmed R, Woodland DL, Doherty PC. Virus-specific CD8+ T cells in primary and secondary influenza pneumonia. Immunity (1998) 8(6):683-91. doi:10.1016/S1074-7613(00)80573-7
    • (1998) Immunity , vol.8 , Issue.6 , pp. 683-691
    • Flynn, K.J.1    Belz, G.T.2    Altman, J.D.3    Ahmed, R.4    Woodland, D.L.5    Doherty, P.C.6
  • 36
    • 84863981120 scopus 로고    scopus 로고
    • Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms
    • Caporaso JG, Lauber CL, Walters WA, Berg-Lyons D, Huntley J, Fierer N, et al. Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms. ISME J (2012) 6(8):1621-4. doi:10.1038/ismej.2012.8
    • (2012) ISME J , vol.6 , Issue.8 , pp. 1621-1624
    • Caporaso, J.G.1    Lauber, C.L.2    Walters, W.A.3    Berg-Lyons, D.4    Huntley, J.5    Fierer, N.6
  • 37
    • 84859210032 scopus 로고    scopus 로고
    • Fast gapped-read alignment with Bowtie 2
    • Langmead B, Salzberg SL. Fast gapped-read alignment with Bowtie 2. Nat Methods (2012) 9(4):357-9. doi:10.1038/nmeth.1923
    • (2012) Nat Methods , vol.9 , Issue.4 , pp. 357-359
    • Langmead, B.1    Salzberg, S.L.2
  • 38
    • 84884904719 scopus 로고    scopus 로고
    • UPARSE: highly accurate OTU sequences from microbial amplicon reads
    • Edgar RC. UPARSE: highly accurate OTU sequences from microbial amplicon reads. Nat Methods (2013) 10(10):996-8. doi:10.1038/nmeth.2604
    • (2013) Nat Methods , vol.10 , Issue.10 , pp. 996-998
    • Edgar, R.C.1
  • 40
    • 84873739311 scopus 로고    scopus 로고
    • The SILVA ribosomal RNA gene database project: improved data processing and web-based tools
    • Quast C, Pruesse E, Yilmaz P, Gerken J, Schweer T, Yarza P, et al. The SILVA ribosomal RNA gene database project: improved data processing and web-based tools. Nucleic Acids Res (2013) 41(Database issue):D590-6. doi:10.1093/nar/gks1219
    • (2013) Nucleic Acids Res , vol.41 , Issue.DATABASE ISSUE , pp. D590-D596
    • Quast, C.1    Pruesse, E.2    Yilmaz, P.3    Gerken, J.4    Schweer, T.5    Yarza, P.6
  • 42
    • 37649025929 scopus 로고    scopus 로고
    • The ecodist package for dissimilarity-based analysis of ecological data
    • Goslee SC, Urban DL. The ecodist package for dissimilarity-based analysis of ecological data. J Stat Softw (2007) 22(7):1-19. doi:10.18637/jss.v022.i07
    • (2007) J Stat Softw , vol.22 , Issue.7 , pp. 1-19
    • Goslee, S.C.1    Urban, D.L.2
  • 43
    • 79851511052 scopus 로고    scopus 로고
    • Austria: R Foundation for Statistical Computing. [cited 2015]. (Accessed: June 16, 2015)
    • R Development Core Team. R: A Language and Environment for Statistical Computing Vienna, Austria: R Foundation for Statistical Computing. (2013). [cited 2015]. Available from: http://www. R-project.org (Accessed: June 16, 2015)
    • (2013) R: A Language and Environment for Statistical Computing Vienna
  • 44
    • 0035133496 scopus 로고    scopus 로고
    • Fitting multivariate models to community data: a comment on distance-based redundancy analysis
    • McArdle BH, Anderson MJ. Fitting multivariate models to community data: a comment on distance-based redundancy analysis. Ecology (2001) 82:290-7. doi:10.1890/0012-9658(2001)082[0290:FMMTCD]2.0.CO;2
    • (2001) Ecology , vol.82 , pp. 290-297
    • McArdle, B.H.1    Anderson, M.J.2
  • 45
    • 84956592275 scopus 로고
    • The absorption and excretion of streptomycin in human chronic typhoid carriers
    • Rutstein DD, Stebbins RB, Cathcart RT, Harvey RM. The absorption and excretion of streptomycin in human chronic typhoid carriers. J Clin Invest (1945) 24(6):898-909. doi:10.1172/JCI101677
    • (1945) J Clin Invest , vol.24 , Issue.6 , pp. 898-909
    • Rutstein, D.D.1    Stebbins, R.B.2    Cathcart, R.T.3    Harvey, R.M.4
  • 46
    • 3242752040 scopus 로고    scopus 로고
    • An animal model of hemophagocytic lymphohistiocytosis (HLH): CD8+ T cells and interferon gamma are essential for the disorder
    • Jordan MB, Hildeman D, Kappler J, Marrack P. An animal model of hemophagocytic lymphohistiocytosis (HLH): CD8+ T cells and interferon gamma are essential for the disorder. Blood (2004) 104(3):735-43. doi:10.1182/blood-2003-10-3413
    • (2004) Blood , vol.104 , Issue.3 , pp. 735-743
    • Jordan, M.B.1    Hildeman, D.2    Kappler, J.3    Marrack, P.4
  • 47
    • 85027948313 scopus 로고    scopus 로고
    • Innate lymphoid cells promote lung-tissue homeostasis after infection with influenza virus
    • Monticelli LA, Sonnenberg GF, Abt MC, Alenghat T, Ziegler CG, Doering TA, et al. Innate lymphoid cells promote lung-tissue homeostasis after infection with influenza virus. Nat Immunol (2011) 12(11):1045-54. doi:10.1031/ni.2131
    • (2011) Nat Immunol , vol.12 , Issue.11 , pp. 1045-1054
    • Monticelli, L.A.1    Sonnenberg, G.F.2    Abt, M.C.3    Alenghat, T.4    Ziegler, C.G.5    Doering, T.A.6
  • 48
    • 84943170553 scopus 로고    scopus 로고
    • Innate immune defenses mediated by two ILC subsets are critical for protection against acute Clostridium difficile infection
    • Abt MC, Lewis BB, Caballero S, Xiong H, Carter RA, Susac B, et al. Innate immune defenses mediated by two ILC subsets are critical for protection against acute Clostridium difficile infection. Cell Host Microbe (2015) 18(1):27-37. doi:10.1016/j.chom.2015.06.011
    • (2015) Cell Host Microbe , vol.18 , Issue.1 , pp. 27-37
    • Abt, M.C.1    Lewis, B.B.2    Caballero, S.3    Xiong, H.4    Carter, R.A.5    Susac, B.6
  • 50
    • 79960453738 scopus 로고    scopus 로고
    • A requisite role for induced regulatory T cells in tolerance based on expanding antigen receptor diversity
    • Haribhai D, Williams JB, Jia S, Nickerson D, Schmitt EG, Edwards B, et al. A requisite role for induced regulatory T cells in tolerance based on expanding antigen receptor diversity. Immunity (2011) 35(1):109-22. doi:10.1016/j.immuni.2011.03.029
    • (2011) Immunity , vol.35 , Issue.1 , pp. 109-122
    • Haribhai, D.1    Williams, J.B.2    Jia, S.3    Nickerson, D.4    Schmitt, E.G.5    Edwards, B.6
  • 51
    • 70349687102 scopus 로고    scopus 로고
    • CD4+CD25+Foxp3+ Tregs resolve experimental lung injury in mice and are present in humans with acute lung injury
    • D'Alessio FR, Tsushima K, Aggarwal NR, West EE, Willett MH, Britos MF, et al. CD4+CD25+Foxp3+ Tregs resolve experimental lung injury in mice and are present in humans with acute lung injury. J Clin Invest (2009) 119(10):2898-913. doi:10.1172/JCI36498
    • (2009) J Clin Invest , vol.119 , Issue.10 , pp. 2898-2913
    • D'Alessio, F.R.1    Tsushima, K.2    Aggarwal, N.R.3    West, E.E.4    Willett, M.H.5    Britos, M.F.6
  • 52
    • 53349173070 scopus 로고    scopus 로고
    • Specific microbiota direct the differentiation of IL-17-producing T-helper cells in the mucosa of the small intestine
    • Ivanov II, Frutos Rde L, Manel N, Yoshinaga K, Rifkin DB, Sartor RB, et al. Specific microbiota direct the differentiation of IL-17-producing T-helper cells in the mucosa of the small intestine. Cell Host Microbe (2008) 4(4):337-49. doi:10.1016/j.chom.2008.09.009
    • (2008) Cell Host Microbe , vol.4 , Issue.4 , pp. 337-349
    • Ivanov, I.I.1    Frutos Rde, L.2    Manel, N.3    Yoshinaga, K.4    Rifkin, D.B.5    Sartor, R.B.6
  • 53
    • 84856957894 scopus 로고    scopus 로고
    • Inflammasome-mediated dysbiosis regulates progression of NAFLD and obesity
    • Henao-Mejia J, Elinav E, Jin C, Hao L, Mehal WZ, Strowig T, et al. Inflammasome-mediated dysbiosis regulates progression of NAFLD and obesity. Nature (2012) 482(7384):179-85. doi:10.1038/nature10809
    • (2012) Nature , vol.482 , Issue.7384 , pp. 179-185
    • Henao-Mejia, J.1    Elinav, E.2    Jin, C.3    Hao, L.4    Mehal, W.Z.5    Strowig, T.6
  • 54
    • 85031826181 scopus 로고    scopus 로고
    • Atopic asthmatic immune phenotypes associated with airway microbiota and airway obstruction
    • Turturice BA, McGee HS, Oliver B, Baraket M, Nguyen BT, Ascoli C, et al. Atopic asthmatic immune phenotypes associated with airway microbiota and airway obstruction. PLoS One (2017) 12(10):e0184566. doi:10.1371/journal.pone.0184566
    • (2017) PLoS One , vol.12 , Issue.10
    • Turturice, B.A.1    McGee, H.S.2    Oliver, B.3    Baraket, M.4    Nguyen, B.T.5    Ascoli, C.6
  • 55
    • 84911925056 scopus 로고    scopus 로고
    • Respiratory influenza virus infection induces intestinal immune injury via microbiota-mediated Th17 cell-dependent inflammation
    • Wang J, Li F, Wei H, Lian ZX, Sun R, Tian Z. Respiratory influenza virus infection induces intestinal immune injury via microbiota-mediated Th17 cell-dependent inflammation. J Exp Med (2014) 211(12):2397-410. doi:10.1084/jem.20140625
    • (2014) J Exp Med , vol.211 , Issue.12 , pp. 2397-2410
    • Wang, J.1    Li, F.2    Wei, H.3    Lian, Z.X.4    Sun, R.5    Tian, Z.6
  • 56
    • 77149135298 scopus 로고    scopus 로고
    • Human NKp44+IL-22+ cells and LTi-like cells constitute a stable RORC+ lineage distinct from conventional natural killer cells
    • Crellin NK, Trifari S, Kaplan CD, Cupedo T, Spits H. Human NKp44+IL-22+ cells and LTi-like cells constitute a stable RORC+ lineage distinct from conventional natural killer cells. J Exp Med (2010) 207(2):281-90. doi:10.1084/jem.20091509
    • (2010) J Exp Med , vol.207 , Issue.2 , pp. 281-290
    • Crellin, N.K.1    Trifari, S.2    Kaplan, C.D.3    Cupedo, T.4    Spits, H.5
  • 57
    • 84974855845 scopus 로고    scopus 로고
    • CD4+ group 1 innate lymphoid cells (ILC) form a functionally distinct ILC subset that is increased in systemic sclerosis
    • Roan F, Stoklasek TA, Whalen E, Molitor JA, Bluestone JA, Buckner JH, et al. CD4+ group 1 innate lymphoid cells (ILC) form a functionally distinct ILC subset that is increased in systemic sclerosis. J Immunol (2016) 196(5):2051-62. doi:10.4049/jimmunol.1600364
    • (2016) J Immunol , vol.196 , Issue.5 , pp. 2051-2062
    • Roan, F.1    Stoklasek, T.A.2    Whalen, E.3    Molitor, J.A.4    Bluestone, J.A.5    Buckner, J.H.6
  • 58
    • 84857538593 scopus 로고    scopus 로고
    • Disease tolerance as a defense strategy
    • Medzhitov R, Schneider DS, Soares MP. Disease tolerance as a defense strategy. Science (2012) 335(6071):936-41. doi:10.1126/science.1214935
    • (2012) Science , vol.335 , Issue.6071 , pp. 936-941
    • Medzhitov, R.1    Schneider, D.S.2    Soares, M.P.3
  • 59
    • 84859406163 scopus 로고    scopus 로고
    • Tolerance of infections
    • Ayres JS, Schneider DS. Tolerance of infections. Annu Rev Immunol (2012) 30:271-94. doi:10.1146/annurev-immunol-020711-075030
    • (2012) Annu Rev Immunol , vol.30 , pp. 271-294
    • Ayres, J.S.1    Schneider, D.S.2
  • 60
    • 79955569490 scopus 로고    scopus 로고
    • Development of the human gastrointestinal microbiota and insights from high-throughput sequencing
    • Dominguez-Bello MG, Blaser MJ, Ley RE, Knight R. Development of the human gastrointestinal microbiota and insights from high-throughput sequencing. Gastroenterology (2011) 140(6):1713-9. doi:10.1053/j.gastro.2011.02.011
    • (2011) Gastroenterology , vol.140 , Issue.6 , pp. 1713-1719
    • Dominguez-Bello, M.G.1    Blaser, M.J.2    Ley, R.E.3    Knight, R.4
  • 61
    • 84878119245 scopus 로고    scopus 로고
    • Intestinal microbiota in healthy U.S. young children and adults-a high throughput microarray analysis
    • Ringel-Kulka T, Cheng J, Ringel Y, Salojarvi J, Carroll I, Palva A, et al. Intestinal microbiota in healthy U.S. young children and adults-a high throughput microarray analysis. PLoS One (2013) 8(5):e64315. doi:10.1371/journal.pone.0064315
    • (2013) PLoS One , vol.8 , Issue.5
    • Ringel-Kulka, T.1    Cheng, J.2    Ringel, Y.3    Salojarvi, J.4    Carroll, I.5    Palva, A.6
  • 62
    • 77955602581 scopus 로고    scopus 로고
    • Through ageing, and beyond: gut microbiota and inflammatory status in seniors and centenarians
    • Biagi E, Nylund L, Candela M, Ostan R, Bucci L, Pini E, et al. Through ageing, and beyond: gut microbiota and inflammatory status in seniors and centenarians. PLoS One (2010) 5(5):e10667. doi:10.1371/journal.pone.0010667
    • (2010) PLoS One , vol.5 , Issue.5
    • Biagi, E.1    Nylund, L.2    Candela, M.3    Ostan, R.4    Bucci, L.5    Pini, E.6
  • 63
    • 0037425564 scopus 로고    scopus 로고
    • Mortality associated with influenza and respiratory syncytial virus in the United States
    • Thompson WW, Shay DK, Weintraub E, Brammer L, Cox N, Anderson LJ, et al. Mortality associated with influenza and respiratory syncytial virus in the United States. JAMA (2003) 289(2):179-86. doi:10.1001/jama.289.2.179
    • (2003) JAMA , vol.289 , Issue.2 , pp. 179-186
    • Thompson, W.W.1    Shay, D.K.2    Weintraub, E.3    Brammer, L.4    Cox, N.5    Anderson, L.J.6
  • 64
    • 84864311450 scopus 로고    scopus 로고
    • Commensal bacteria calibrate the activation threshold of innate antiviral immunity
    • Abt MC, Osborne LC, Monticelli LA, Doering TA, Alenghat T, Sonnenberg GF, et al. Commensal bacteria calibrate the activation threshold of innate antiviral immunity. Immunity (2012) 37(1):158-70. doi:10.1016/j.immuni.2012.04.011
    • (2012) Immunity , vol.37 , Issue.1 , pp. 158-170
    • Abt, M.C.1    Osborne, L.C.2    Monticelli, L.A.3    Doering, T.A.4    Alenghat, T.5    Sonnenberg, G.F.6
  • 65
    • 70449285415 scopus 로고
    • Comparative toxicity studies on ten antibiotics in current use
    • Bacharach AL, Clark BJ, Mc CM, Tomich EG. Comparative toxicity studies on ten antibiotics in current use. J Pharm Pharmacol (1959) 11:737-41. doi:10.1111/j.2042-7158.1959.tb12620.x
    • (1959) J Pharm Pharmacol , vol.11 , pp. 737-741
    • Bacharach, A.L.1    Clark, B.J.2    Mc, C.M.3    Tomich, E.G.4
  • 66
    • 84954460126 scopus 로고    scopus 로고
    • Streptomycin treatment alters the intestinal microbiome, pulmonary T cell profile and airway hyperresponsiveness in a cystic fibrosis mouse model
    • Bazett M, Bergeron ME, Haston CK. Streptomycin treatment alters the intestinal microbiome, pulmonary T cell profile and airway hyperresponsiveness in a cystic fibrosis mouse model. Sci Rep (2016) 6:19189. doi:10.1038/srep19189
    • (2016) Sci Rep , vol.6 , pp. 19189
    • Bazett, M.1    Bergeron, M.E.2    Haston, C.K.3
  • 67
    • 84881477044 scopus 로고    scopus 로고
    • Treg induction by a rationally selected mixture of Clostridia strains from the human microbiota
    • Atarashi K, Tanoue T, Oshima K, Suda W, Nagano Y, Nishikawa H, et al. Treg induction by a rationally selected mixture of Clostridia strains from the human microbiota. Nature (2013) 500(7461):232-6. doi:10.1038/nature12331
    • (2013) Nature , vol.500 , Issue.7461 , pp. 232-236
    • Atarashi, K.1    Tanoue, T.2    Oshima, K.3    Suda, W.4    Nagano, Y.5    Nishikawa, H.6
  • 68
    • 84890564250 scopus 로고    scopus 로고
    • Commensal microbe-derived butyrate induces the differentiation of colonic regulatory T cells
    • Furusawa Y, Obata Y, Fukuda S, Endo TA, Nakato G, Takahashi D, et al. Commensal microbe-derived butyrate induces the differentiation of colonic regulatory T cells. Nature (2013) 504(7480):446-50. doi:10.1038/nature12721
    • (2013) Nature , vol.504 , Issue.7480 , pp. 446-450
    • Furusawa, Y.1    Obata, Y.2    Fukuda, S.3    Endo, T.A.4    Nakato, G.5    Takahashi, D.6
  • 69
    • 85040354358 scopus 로고    scopus 로고
    • Contributions of the intestinal microbiome in lung immunity
    • McAleer JP, Kolls JK. Contributions of the intestinal microbiome in lung immunity. Eur J Immunol (2018) 48(1):39-49. doi:10.1002/eji.201646721
    • (2018) Eur J Immunol , vol.48 , Issue.1 , pp. 39-49
    • McAleer, J.P.1    Kolls, J.K.2
  • 70
    • 84934987107 scopus 로고    scopus 로고
    • Evidence that asthma is a developmental origin disease influenced by maternal diet and bacterial metabolites
    • Thorburn AN, McKenzie CI, Shen S, Stanley D, Macia L, Mason LJ, et al. Evidence that asthma is a developmental origin disease influenced by maternal diet and bacterial metabolites. Nat Commun (2015) 6:7320. doi:10.1038/ncomms8320
    • (2015) Nat Commun , vol.6 , pp. 7320
    • Thorburn, A.N.1    McKenzie, C.I.2    Shen, S.3    Stanley, D.4    Macia, L.5    Mason, L.J.6


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