-
1
-
-
84909979667
-
Gut microbes and the brain: Paradigm shift in neuroscience
-
PMID: 25392516
-
Mayer EA, Knight R, Mazmanian SK, Cryan JF, Tillisch K. Gut Microbes and the Brain: Paradigm Shift in Neuroscience. Journal of Neuroscience. 2014; 34(46):15490–6. https://doi.org/10.1523/JNEUROSCI.3299-14.2014 PMID: 25392516
-
(2014)
Journal of Neuroscience
, vol.34
, Issue.46
, pp. 15490-15496
-
-
Mayer, E.A.1
Knight, R.2
Mazmanian, S.K.3
Cryan, J.F.4
Tillisch, K.5
-
2
-
-
84866546211
-
Mind-altering microorganisms: The impact of the gut microbiota on brain and behaviour
-
PMID: 22968153
-
Cryan JF, Dinan TG. Mind-altering microorganisms: the impact of the gut microbiota on brain and behaviour. Nat Rev Neurosci. 2012; 13(10):701–12. https://doi.org/10.1038/nrn3346 PMID: 22968153.
-
(2012)
Nat Rev Neurosci
, vol.13
, Issue.10
, pp. 701-712
-
-
Cryan, J.F.1
Dinan, T.G.2
-
3
-
-
84994792268
-
The central nervous system and the gut microbiome
-
PMID: 27814521
-
Sharon G, Sampson TR, Geschwind DH, Mazmanian SK. The Central Nervous System and the Gut Microbiome. Cell. 2016; 167(4):915–32. https://doi.org/10.1016/j.cell.2016.10.027 PMID: 27814521
-
(2016)
Cell
, vol.167
, Issue.4
, pp. 915-932
-
-
Sharon, G.1
Sampson, T.R.2
Geschwind, D.H.3
Mazmanian, S.K.4
-
4
-
-
84979284365
-
Gut microbiota and brain function: An evolving field in neuroscience
-
PMID: 26438800
-
Foster JA, Lyte M, Meyer E, Cryan JF. Gut Microbiota and Brain Function: An Evolving Field in Neuroscience. Int J Neuropsychopharmacol. 2016; 19(5). https://doi.org/10.1093/ijnp/pyv114 PMID: 26438800
-
(2016)
Int J Neuropsychopharmacol
, vol.19
, Issue.5
-
-
Foster, J.A.1
Lyte, M.2
Meyer, E.3
Cryan, J.F.4
-
5
-
-
84859713007
-
Microbes and the gut-brain axis
-
PMID: 22404222
-
Bercik P, Collins SM, Verdu EF. Microbes and the gut-brain axis. Neurogastroenterol Motil. 2012; 24 (5):405–13. https://doi.org/10.1111/j.1365-2982.2012.01906.x PMID: 22404222.
-
(2012)
Neurogastroenterol Motil
, vol.24
, Issue.5
, pp. 405-413
-
-
Bercik, P.1
Collins, S.M.2
Verdu, E.F.3
-
6
-
-
84989157896
-
Growing up in a bubble: Using germ-free animals to assess the influence of the gut microbiota on brain and behavior
-
PMID: 26912607
-
Luczynski P, McVey Neufeld KA, Oriach CS, Clarke G, Dinan TG, Cryan JF. Growing up in a Bubble: Using Germ-Free Animals to Assess the Influence of the Gut Microbiota on Brain and Behavior. Int J Neuropsychopharmacol. 2016; 19(8). https://doi.org/10.1093/ijnp/pyw020 PMID: 26912607
-
(2016)
Int J Neuropsychopharmacol
, vol.19
, Issue.8
-
-
Luczynski, P.1
McVey Neufeld, K.A.2
Oriach, C.S.3
Clarke, G.4
Dinan, T.G.5
Cryan, J.F.6
-
7
-
-
84871776844
-
The intestinal microbiome, probiotics and prebiotics in neurogastroenterology
-
PMID: 23202796
-
Saulnier DM, Ringel Y, Heyman MB, Foster JA, Bercik P, Shulman RJ, et al. The intestinal microbiome, probiotics and prebiotics in neurogastroenterology. Gut Microbes. 2013; 4(1):17–27. https://doi.org/10.4161/gmic.22973 PMID: 23202796
-
(2013)
Gut Microbes
, vol.4
, Issue.1
, pp. 17-27
-
-
Saulnier, D.M.1
Ringel, Y.2
Heyman, M.B.3
Foster, J.A.4
Bercik, P.5
Shulman, R.J.6
-
8
-
-
84877145046
-
Gut-brain axis: How the microbiome influences anxiety and depression
-
PMID: 23384445
-
Foster JA, McVey Neufeld KA. Gut-brain axis: how the microbiome influences anxiety and depression. Trends Neurosci. 2013; 36(5):305–12. https://doi.org/10.1016/j.tins.2013.01.005 PMID: 23384445.
-
(2013)
Trends Neurosci
, vol.36
, Issue.5
, pp. 305-312
-
-
Foster, J.A.1
McVey Neufeld, K.A.2
-
9
-
-
84995495735
-
The bacterial peptidoglycan-sens-ing molecule Pglyrp2 modulates brain development and behavior
-
PMID: 27843150
-
Arentsen T, Qian Y, Gkotzis S, Femenia T, Wang T, Udekwu K, et al. The bacterial peptidoglycan-sens-ing molecule Pglyrp2 modulates brain development and behavior. Molecular psychiatry. 2017; 22 (2):257–66. https://doi.org/10.1038/mp.2016.182 PMID: 27843150
-
(2017)
Molecular Psychiatry
, vol.22
, Issue.2
, pp. 257-266
-
-
Arentsen, T.1
Qian, Y.2
Gkotzis, S.3
Femenia, T.4
Wang, T.5
Udekwu, K.6
-
10
-
-
84971253961
-
Host microbiota modulates development of social preference in mice
-
PMID: 26679775
-
Arentsen T, Raith H, Qian Y, Forssberg H, Diaz Heijtz R. Host microbiota modulates development of social preference in mice. Microb Ecol Health Dis. 2015; 26:29719. https://doi.org/10.3402/mehd.v26. 29719 PMID: 26679775
-
(2015)
Microb Ecol Health Dis
, vol.26
, pp. 29719
-
-
Arentsen, T.1
Raith, H.2
Qian, Y.3
Forssberg, H.4
Diaz Heijtz, R.5
-
11
-
-
84878241830
-
The microbiome-gut-brain axis during early life regulates the hippocampal serotonergic system in a sex-dependent manner
-
PMID: 22688187
-
Clarke G, Grenham S, Scully P, Fitzgerald P, Moloney RD, Shanahan F, et al. The microbiome-gut-brain axis during early life regulates the hippocampal serotonergic system in a sex-dependent manner. Mol Psychiatry. 2013; 18(6):666–73. https://doi.org/10.1038/mp.2012.77 PMID: 22688187.
-
(2013)
Mol Psychiatry
, vol.18
, Issue.6
, pp. 666-673
-
-
Clarke, G.1
Grenham, S.2
Scully, P.3
Fitzgerald, P.4
Moloney, R.D.5
Shanahan, F.6
-
12
-
-
79952601424
-
Normal gut microbiota modulates brain development and behavior
-
PMID: 21282636
-
Diaz Heijtz R, Wang S, Anuar F, Qian Y, Bjorkholm B, Samuelsson A, et al. Normal gut microbiota modulates brain development and behavior. Proc Natl Acad Sci U S A. 2011; 108(7):3047–52. https://doi.org/10.1073/pnas.1010529108 PMID: 21282636
-
(2011)
Proc Natl Acad Sci U S A
, vol.108
, Issue.7
, pp. 3047-3052
-
-
Diaz Heijtz, R.1
Wang, S.2
Anuar, F.3
Qian, Y.4
Bjorkholm, B.5
Samuelsson, A.6
-
13
-
-
79551713705
-
Reduced anxiety-like behavior and central neurochemical change in germ-free mice
-
e119. PMID: 21054680
-
Neufeld KM, Kang N, Bienenstock J, Foster JA. Reduced anxiety-like behavior and central neurochemical change in germ-free mice. Neurogastroenterol Motil. 2011; 23(3):255–64, e119. https://doi.org/10.1111/j.1365-2982.2010.01620.x PMID: 21054680.
-
(2011)
Neurogastroenterol Motil
, vol.23
, Issue.3
, pp. 255-264
-
-
Neufeld, K.M.1
Kang, N.2
Bienenstock, J.3
Foster, J.A.4
-
14
-
-
84893696250
-
Microbiota is essential for social development in the mouse
-
PMID: 23689536
-
Desbonnet L, Clarke G, Shanahan F, Dinan TG, Cryan JF. Microbiota is essential for social development in the mouse. Mol Psychiatry. 2014; 19(2):146–8. https://doi.org/10.1038/mp.2013.65 PMID: 23689536
-
(2014)
Mol Psychiatry
, vol.19
, Issue.2
, pp. 146-148
-
-
Desbonnet, L.1
Clarke, G.2
Shanahan, F.3
Dinan, T.G.4
Cryan, J.F.5
-
15
-
-
84894118144
-
Microbiota modulate behavioral and physiological abnormalities associated with neurodevelopmental disorders
-
PMID: 24315484
-
Hsiao EY, McBride SW, Hsien S, Sharon G, Hyde ER, McCue T, et al. Microbiota modulate behavioral and physiological abnormalities associated with neurodevelopmental disorders. Cell. 2013; 155 (7):1451–63. https://doi.org/10.1016/j.cell.2013.11.024 PMID: 24315484
-
(2013)
Cell
, vol.155
, Issue.7
, pp. 1451-1463
-
-
Hsiao, E.Y.1
McBride, S.W.2
Hsien, S.3
Sharon, G.4
Hyde, E.R.5
McCue, T.6
-
16
-
-
80051535923
-
The intestinal microbiota affect central levels of brain-derived neurotropic factor and behavior in mice
-
e1–3. PMID: 21683077
-
Bercik P, Denou E, Collins J, Jackson W, Lu J, Jury J, et al. The intestinal microbiota affect central levels of brain-derived neurotropic factor and behavior in mice. Gastroenterology. 2011; 141(2):599–609, e1–3. https://doi.org/10.1053/j.gastro.2011.04.052 PMID: 21683077.
-
(2011)
Gastroenterology
, vol.141
, Issue.2
, pp. 599-609
-
-
Bercik, P.1
Denou, E.2
Collins, J.3
Jackson, W.4
Lu, J.5
Jury, J.6
-
17
-
-
85014649400
-
Transplantation of fecal microbiota from patients with irritable bowel syndrome alters gut function and behavior in recipient mice
-
PMID: 28251905
-
DePalma G, Lynch MDJ, Lu J, Dang VT, Deng Y, Jury J, et al. Transplantation of fecal microbiota from patients with irritable bowel syndrome alters gut function and behavior in recipient mice. Science translational medicine. 2017; 9(379):eaaf6397. https://doi.org/10.1126/scitranslmed.aaf6397 PMID: 28251905
-
(2017)
Science Translational Medicine
, vol.9
, Issue.379
, pp. eaaf6397
-
-
DePalma, G.1
Lynch, M.D.J.2
Lu, J.3
Dang, V.T.4
Deng, Y.5
Jury, J.6
-
18
-
-
85021767106
-
The microbiome regulates amygdala-dependent fear recall
-
PMID: 28507320
-
Hoban AE, Stilling RM, Moloney G, Shanahan F, Dinan TG, Clarke G, et al. The microbiome regulates amygdala-dependent fear recall. Mol Psychiatry. 2017. https://doi.org/10.1038/mp.2017.100 PMID: 28507320.
-
(2017)
Mol Psychiatry
-
-
Hoban, A.E.1
Stilling, R.M.2
Moloney, G.3
Shanahan, F.4
Dinan, T.G.5
Clarke, G.6
-
19
-
-
84938073613
-
Microbiota and host determinants of behavioural phenotype in maternally separated mice
-
PMID: 26218677
-
De Palma G, Blennerhassett P, Lu J, Deng Y, Park AJ, Green W, et al. Microbiota and host determinants of behavioural phenotype in maternally separated mice. Nat Commun. 2015; 6:7735. https://doi.org/10.1038/ncomms8735 PMID: 26218677.
-
(2015)
Nat Commun
, vol.6
, pp. 7735
-
-
De Palma, G.1
Blennerhassett, P.2
Lu, J.3
Deng, Y.4
Park, A.J.5
Green, W.6
-
20
-
-
84975317355
-
Microbial Reconstitution Reverses Maternal Diet-Induced Social and Synaptic Deficits in Offspring
-
PMID: 27315483
-
Buffington SA, Di Prisco GV, Auchtung TA, Ajami NJ, Petrosino JF, Costa-Mattioli M. Microbial Reconstitution Reverses Maternal Diet-Induced Social and Synaptic Deficits in Offspring. Cell. 2016; 165 (7):1762–75. https://doi.org/10.1016/j.cell.2016.06.001 PMID: 27315483
-
(2016)
Cell
, vol.165
, Issue.7
, pp. 1762-1775
-
-
Buffington, S.A.1
Di Prisco, G.V.2
Auchtung, T.A.3
Ajami, N.J.4
Petrosino, J.F.5
Costa-Mattioli, M.6
-
21
-
-
84938273954
-
Gut microbiota depletion from early adolescence in mice: Implications for brain and behaviour
-
PMID: 25866195
-
Desbonnet L, Clarke G, Traplin A, O’Sullivan O, Crispie F, Moloney RD, et al. Gut microbiota depletion from early adolescence in mice: Implications for brain and behaviour. Brain Behav Immun. 2015; 48:165–73. https://doi.org/10.1016/j.bbi.2015.04.004 PMID: 25866195.
-
(2015)
Brain Behav Immun
, vol.48
, pp. 165-173
-
-
Desbonnet, L.1
Clarke, G.2
Traplin, A.3
O’Sullivan, O.4
Crispie, F.5
Moloney, R.D.6
-
22
-
-
84862141704
-
Human gut microbiome viewed across age and geography
-
PMID: 22699611
-
Yatsunenko T, Rey FE, Manary MJ, Trehan I, Dominguez-Bello MG, Contreras M, et al. Human gut microbiome viewed across age and geography. Nature. 2012; 486(7402):222–7. https://doi.org/10.1038/nature11053 PMID: 22699611
-
(2012)
Nature
, vol.486
, Issue.7402
, pp. 222-227
-
-
Yatsunenko, T.1
Rey, F.E.2
Manary, M.J.3
Trehan, I.4
Dominguez-Bello, M.G.5
Contreras, M.6
-
23
-
-
85010902656
-
Maturation of the infant microbiome community structure and function across multiple body sites and in relation to mode of delivery
-
PMID: 28112736
-
Chu DM, Ma J, Prince AL, Antony KM, Seferovic MD, Aagaard KM. Maturation of the infant microbiome community structure and function across multiple body sites and in relation to mode of delivery. Nat Med. 2017; 23(3):314–26. https://doi.org/10.1038/nm.4272 PMID: 28112736
-
(2017)
Nat Med
, vol.23
, Issue.3
, pp. 314-326
-
-
Chu, D.M.1
Ma, J.2
Prince, A.L.3
Antony, K.M.4
Seferovic, M.D.5
Aagaard, K.M.6
-
24
-
-
84895068197
-
Bifidobacteria: Their impact on gut microbiota composition and their applications as probiotics in infants
-
PMID: 24287935
-
Di Gioia D, Aloisio I, Mazzola G, Biavati B. Bifidobacteria: their impact on gut microbiota composition and their applications as probiotics in infants. Appl Microbiol Biotechnol. 2014; 98(2):563–77. https://doi.org/10.1007/s00253-013-5405-9 PMID: 24287935.
-
(2014)
Appl Microbiol Biotechnol
, vol.98
, Issue.2
, pp. 563-577
-
-
Di Gioia, D.1
Aloisio, I.2
Mazzola, G.3
Biavati, B.4
-
25
-
-
84861011960
-
Diversity of bifidobacteria within the infant gut microbiota
-
PMID: 22606315
-
Turroni F, Peano C, Pass DA, Foroni E, Severgnini M, Claesson MJ, et al. Diversity of bifidobacteria within the infant gut microbiota. PLoS One. 2012; 7(5):e36957. https://doi.org/10.1371/journal.pone. 0036957 PMID: 22606315
-
(2012)
PLoS One
, vol.7
, Issue.5
-
-
Turroni, F.1
Peano, C.2
Pass, D.A.3
Foroni, E.4
Severgnini, M.5
Claesson, M.J.6
-
26
-
-
84976385531
-
A key genetic factor for fucosyllac-tose utilization affects infant gut microbiota development
-
PMID: 27340092
-
Matsuki T, Yahagi K, Mori H, Matsumoto H, Hara T, Tajima S, et al. A key genetic factor for fucosyllac-tose utilization affects infant gut microbiota development. Nat Commun. 2016; 7:11939. https://doi.org/10.1038/ncomms11939 PMID: 27340092
-
(2016)
Nat Commun
, vol.7
, pp. 11939
-
-
Matsuki, T.1
Yahagi, K.2
Mori, H.3
Matsumoto, H.4
Hara, T.5
Tajima, S.6
-
27
-
-
84893685421
-
Mother-to-infant transmission of intestinal bifidobacterial strains has an impact on the early development of vaginally delivered infant’s microbiota
-
PMID: 24244304
-
Makino H, Kushiro A, Ishikawa E, Kubota H, Gawad A, Sakai T, et al. Mother-to-infant transmission of intestinal bifidobacterial strains has an impact on the early development of vaginally delivered infant’s microbiota. PLoS One. 2013; 8(11):e78331. https://doi.org/10.1371/journal.pone.0078331 PMID: 24244304
-
(2013)
PLoS One
, vol.8
, Issue.11
-
-
Makino, H.1
Kushiro, A.2
Ishikawa, E.3
Kubota, H.4
Gawad, A.5
Sakai, T.6
-
28
-
-
85012072392
-
Gut Microbiota: A Potential Regulator of Neurodevelopment
-
PMID: 28223922
-
Tognini P. Gut Microbiota: A Potential Regulator of Neurodevelopment. Front Cell Neurosci. 2017; 11:25. https://doi.org/10.3389/fncel.2017.00025 PMID: 28223922
-
(2017)
Front Cell Neurosci
, vol.11
, pp. 25
-
-
Tognini, P.1
-
29
-
-
84979256685
-
GABA-producing Bifidobacterium dentium modulates visceral sensitivity in the intestine
-
PMID: 27458085
-
Pokusaeva K, Johnson C, Luk B, Uribe G, Fu Y, Oezguen N, et al. GABA-producing Bifidobacterium dentium modulates visceral sensitivity in the intestine. Neurogastroenterol Motil. 2017; 29(1). https://doi.org/10.1111/nmo.12904 PMID: 27458085
-
(2017)
Neurogastroenterol Motil
, vol.29
, Issue.1
-
-
Pokusaeva, K.1
Johnson, C.2
Luk, B.3
Uribe, G.4
Fu, Y.5
Oezguen, N.6
-
30
-
-
84907873992
-
Bifidobacteria exert strain-specific effects on stress-related behavior and physiology in BALB/c mice
-
PMID: 25251188
-
Savignac HM, Kiely B, Dinan TG, Cryan JF. Bifidobacteria exert strain-specific effects on stress-related behavior and physiology in BALB/c mice. Neurogastroenterol Motil. 2014; 26(11):1615–27. https://doi.org/10.1111/nmo.12427 PMID: 25251188.
-
(2014)
Neurogastroenterol Motil
, vol.26
, Issue.11
, pp. 1615-1627
-
-
Savignac, H.M.1
Kiely, B.2
Dinan, T.G.3
Cryan, J.F.4
-
31
-
-
84926144982
-
Bifidobacteria modulate cognitive processes in an anxious mouse strain
-
PMID: 25794930
-
Savignac HM, Tramullas M, Kiely B, Dinan TG, Cryan JF. Bifidobacteria modulate cognitive processes in an anxious mouse strain. Behav Brain Res. 2015; 287:59–72. https://doi.org/10.1016/j.bbr.2015.02. 044 PMID: 25794930.
-
(2015)
Behav Brain Res
, vol.287
, pp. 59-72
-
-
Savignac, H.M.1
Tramullas, M.2
Kiely, B.3
Dinan, T.G.4
Cryan, J.F.5
-
32
-
-
53049087266
-
The probiotic Bifidobacteria infantis: An assessment of potential antidepressant properties in the rat
-
PMID: 18456279
-
Desbonnet L, Garrett L, Clarke G, Bienenstock J, Dinan TG. The probiotic Bifidobacteria infantis: An assessment of potential antidepressant properties in the rat. J Psychiatr Res. 2008; 43(2):164–74. https://doi.org/10.1016/j.jpsychires.2008.03.009 PMID: 18456279.
-
(2008)
J Psychiatr Res
, vol.43
, Issue.2
, pp. 164-174
-
-
Desbonnet, L.1
Garrett, L.2
Clarke, G.3
Bienenstock, J.4
Dinan, T.G.5
-
33
-
-
77957142793
-
Effects of the probiotic Bifidobacterium infantis in the maternal separation model of depression
-
PMID: 20696216
-
Desbonnet L, Garrett L, Clarke G, Kiely B, Cryan JF, Dinan TG. Effects of the probiotic Bifidobacterium infantis in the maternal separation model of depression. Neuroscience. 2010; 170(4):1179–88. https://doi.org/10.1016/j.neuroscience.2010.08.005 PMID: 20696216.
-
(2010)
Neuroscience
, vol.170
, Issue.4
, pp. 1179-1188
-
-
Desbonnet, L.1
Garrett, L.2
Clarke, G.3
Kiely, B.4
Cryan, J.F.5
Dinan, T.G.6
-
34
-
-
84896392494
-
Probiotic gut effect prevents the chronic psychological stress-induced brain activity abnormality in mice
-
PMID: 24372793
-
Ait-Belgnaoui A, Colom A, Braniste V, Ramalho L, Marrot A, Cartier C, et al. Probiotic gut effect prevents the chronic psychological stress-induced brain activity abnormality in mice. Neurogastroenterol Motil. 2014; 26(4):510–20. https://doi.org/10.1111/nmo.12295 PMID: 24372793.
-
(2014)
Neurogastroenterol Motil
, vol.26
, Issue.4
, pp. 510-520
-
-
Ait-Belgnaoui, A.1
Colom, A.2
Braniste, V.3
Ramalho, L.4
Marrot, A.5
Cartier, C.6
-
35
-
-
81855194317
-
The anxiolytic effect of Bifidobacterium longum NCC3001 involves vagal pathways for gut-brain communication
-
PMID: 21988661
-
Bercik P, Park AJ, Sinclair D, Khoshdel A, Lu J, Huang X, et al. The anxiolytic effect of Bifidobacterium longum NCC3001 involves vagal pathways for gut-brain communication. Neurogastroenterol Motil. 2011; 23(12):1132–9. https://doi.org/10.1111/j.1365-2982.2011.01796.x PMID: 21988661
-
(2011)
Neurogastroenterol Motil
, vol.23
, Issue.12
, pp. 1132-1139
-
-
Bercik, P.1
Park, A.J.2
Sinclair, D.3
Khoshdel, A.4
Lu, J.5
Huang, X.6
-
36
-
-
84878011292
-
Commensal microbiota modulate murine behaviors in a strictly contamination-free environment confirmed by culture-based methods
-
PMID: 23480302
-
Nishino R, Mikami K, Takahashi H, Tomonaga S, Furuse M, Hiramoto T, et al. Commensal microbiota modulate murine behaviors in a strictly contamination-free environment confirmed by culture-based methods. Neurogastroenterol Motil. 2013; 25(6):521–8. https://doi.org/10.1111/nmo.12110 PMID: 23480302.
-
(2013)
Neurogastroenterol Motil
, vol.25
, Issue.6
, pp. 521-528
-
-
Nishino, R.1
Mikami, K.2
Takahashi, H.3
Tomonaga, S.4
Furuse, M.5
Hiramoto, T.6
-
37
-
-
62149124800
-
Exploring the diversity of the bifidobacterial population in the human intestinal tract
-
PMID: 19168652
-
Turroni F, Foroni E, Pizzetti P, Giubellini V, Ribbera A, Merusi P, et al. Exploring the diversity of the bifidobacterial population in the human intestinal tract. Appl Environ Microbiol. 2009; 75(6):1534–45. https://doi.org/10.1128/AEM.02216-08 PMID: 19168652
-
(2009)
Appl Environ Microbiol
, vol.75
, Issue.6
, pp. 1534-1545
-
-
Turroni, F.1
Foroni, E.2
Pizzetti, P.3
Giubellini, V.4
Ribbera, A.5
Merusi, P.6
-
38
-
-
84988859639
-
Gut Bifidobacteria Populations in Human Health and Aging
-
PMID: 27594848
-
Arboleya S, Watkins C, Stanton C, Ross RP. Gut Bifidobacteria Populations in Human Health and Aging. Front Microbiol. 2016; 7:1204. https://doi.org/10.3389/fmicb.2016.01204 PMID: 27594848
-
(2016)
Front Microbiol
, vol.7
, pp. 1204
-
-
Arboleya, S.1
Watkins, C.2
Stanton, C.3
Ross, R.P.4
-
39
-
-
84971301387
-
Ly6C(hi) Monocytes Provide a Link between Antibiotic-Induced Changes in Gut Microbiota and Adult Hippocampal Neurogenesis
-
PMID: 27210745
-
Mohle L, Mattei D, Heimesaat MM, Bereswill S, Fischer A, Alutis M, et al. Ly6C(hi) Monocytes Provide a Link between Antibiotic-Induced Changes in Gut Microbiota and Adult Hippocampal Neurogenesis. Cell Rep. 2016; 15(9):1945–56. https://doi.org/10.1016/j.celrep.2016.04.074 PMID: 27210745.
-
(2016)
Cell Rep
, vol.15
, Issue.9
, pp. 1945-1956
-
-
Mohle, L.1
Mattei, D.2
Heimesaat, M.M.3
Bereswill, S.4
Fischer, A.5
Alutis, M.6
-
40
-
-
85001930733
-
Gut Microbiota Regulate Motor Deficits and Neuroinflammation in a Model of Parkinson’s Disease
-
PMID: 27912057
-
Sampson TR, Debelius JW, Thron T, Janssen S, Shastri GG, Ilhan ZE, et al. Gut Microbiota Regulate Motor Deficits and Neuroinflammation in a Model of Parkinson’s Disease. Cell. 2016; 167(6):1469–80 e12. https://doi.org/10.1016/j.cell.2016.11.018 PMID: 27912057
-
(2016)
Cell
, vol.167
, Issue.6
-
-
Sampson, T.R.1
Debelius, J.W.2
Thron, T.3
Janssen, S.4
Shastri, G.G.5
Ilhan, Z.E.6
-
41
-
-
0029162158
-
Quantitative Fluorescence In Situ Hybridization of Bifidobacterium spp. With Genus-Specific 16S rRNA-Targeted Probes and Its Application in Fecal Samples
-
PMID: 7487040
-
Langendijk Petra S., Schut Frits, Jansen Gijsbert J., Raangs Gerwin C., Kamphuis Ger R., Wilkinson Michael H. F., et al. Quantitative Fluorescence In Situ Hybridization of Bifidobacterium spp. with Genus-Specific 16S rRNA-Targeted Probes and Its Application in Fecal Samples. Applied and environmental microbiology. 1995; 61(8):3069–75. PMID: 7487040
-
(1995)
Applied and Environmental Microbiology
, vol.61
, Issue.8
, pp. 3069-3075
-
-
Langendijk Petra, S.1
Frits, S.2
Jansen Gijsbert, J.3
Raangs Gerwin, C.4
Kamphuis Ger, R.5
Wilkinson Michael, H.F.6
-
42
-
-
84859210032
-
Fast gapped-read alignment with Bowtie 2
-
PMID: 22388286
-
Langmead B, Salzberg SL. Fast gapped-read alignment with Bowtie 2. Nat Methods. 2012; 9(4):357–9. https://doi.org/10.1038/nmeth.1923 PMID: 22388286
-
(2012)
Nat Methods
, vol.9
, Issue.4
, pp. 357-359
-
-
Langmead, B.1
Salzberg, S.L.2
-
43
-
-
84930000752
-
LotuS: An efficient and user-friendly OTU processing pipeline
-
Hildebrand F, Tadeo R, Voigt AY, Bork P, Raes J. LotuS: an efficient and user-friendly OTU processing pipeline. Microbiome. 2014; 2(30).
-
(2014)
Microbiome
, vol.2
, Issue.30
-
-
Hildebrand, F.1
Tadeo, R.2
Voigt, A.Y.3
Bork, P.4
Raes, J.5
-
44
-
-
34548293679
-
Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy
-
PMID: 17586664
-
Wang Q, Garrity GM, Tiedje JM, Cole JR. Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy. Appl Environ Microbiol. 2007; 73(16):5261–7. https://doi.org/10.1128/AEM.00062-07 PMID: 17586664
-
(2007)
Appl Environ Microbiol
, vol.73
, Issue.16
, pp. 5261-5267
-
-
Wang, Q.1
Garrity, G.M.2
Tiedje, J.M.3
Cole, J.R.4
-
45
-
-
84873739311
-
The SILVA ribosomal RNA gene database project: Improved data processing and web-based tools
-
PMID: 23193283
-
Quast C, Pruesse E, Yilmaz P, Gerken J, Schweer T, Yarza P, et al. The SILVA ribosomal RNA gene database project: improved data processing and web-based tools. Nucleic Acids Res. 2013; 41(Data-base issue):D590–6. https://doi.org/10.1093/nar/gks1219 PMID: 23193283
-
(2013)
Nucleic Acids Res
, vol.41
, Issue.Data-base issue
, pp. D590-D596
-
-
Quast, C.1
Pruesse, E.2
Yilmaz, P.3
Gerken, J.4
Schweer, T.5
Yarza, P.6
-
46
-
-
77952243141
-
QIIME allows analysis of high-throughput community sequencing data
-
PMID: 20383131
-
Caporaso JG, Kuczynski J, Stombaugh J, Bittinger K, Bushman FD, Costello EK, et al. QIIME allows analysis of high-throughput community sequencing data. Nat Methods. 2010; 7(5):335–6. https://doi.org/10.1038/nmeth.f.303 PMID: 20383131
-
(2010)
Nat Methods
, vol.7
, Issue.5
, pp. 335-336
-
-
Caporaso, J.G.1
Kuczynski, J.2
Stombaugh, J.3
Bittinger, K.4
Bushman, F.D.5
Costello, E.K.6
-
47
-
-
84991526597
-
EMPeror: A tool for visualizing high-throughput microbial community data
-
Nov 26; PMID: 24280061
-
Vazquez-Baeza Y PM, Gonzalez A, Knight R. EMPeror: a tool for visualizing high-throughput microbial community data Gigascience. 2013 Nov 26; 2(1):16. https://doi.org/10.1186/2047-217X-2-16 PMID: 24280061
-
(2013)
Gigascience
, vol.2
, Issue.1
, pp. 16
-
-
Vazquez-Baeza, Y.P.M.1
Gonzalez, A.2
Knight, R.3
-
48
-
-
80055103366
-
Elevated plus maze for mice
-
PMID: 19229173
-
Komada M, Takao K, Miyakawa T. Elevated plus maze for mice. J Vis Exp. 2008;(22). https://doi.org/10.3791/1088 PMID: 19229173
-
(2008)
J Vis Exp
, vol.22
-
-
Komada, M.1
Takao, K.2
Miyakawa, T.3
-
49
-
-
0029083245
-
Factor Analysis of Spatiotemporal and Ethological Measures in the Murine Elevated Plus-Maze Test of Anxiety
-
Rodgers RJ, Johnson NJT. Factor Analysis of Spatiotemporal and Ethological Measures in the Murine Elevated Plus-Maze Test of Anxiety. Pharmacology Biochemistry and Behavior. 1995; 52(2):297–303.
-
(1995)
Pharmacology Biochemistry and Behavior
, vol.52
, Issue.2
, pp. 297-303
-
-
Rodgers, R.J.1
Johnson, N.J.T.2
-
50
-
-
67649506191
-
Tests to assess motor phenotype in mice: A user’s guide
-
PMID: 19513088
-
Brooks SP, Dunnett SB. Tests to assess motor phenotype in mice: a user’s guide. Nat Rev Neurosci. 2009; 10(7):519–29. https://doi.org/10.1038/nrn2652 PMID: 19513088.
-
(2009)
Nat Rev Neurosci
, vol.10
, Issue.7
, pp. 519-529
-
-
Brooks, S.P.1
Dunnett, S.B.2
-
51
-
-
84893171836
-
Measuring motor coordination in mice
-
PMID: 23748408
-
Deacon RM. Measuring motor coordination in mice. J Vis Exp. 2013;(75):e2609. https://doi.org/10.3791/2609 PMID: 23748408
-
(2013)
J Vis Exp
, vol.75
, pp. e2609
-
-
Deacon, R.M.1
-
52
-
-
84860889573
-
The novel object recognition memory: Neurobiology, test procedure, and its modifications
-
PMID: 22160349
-
Antunes M, Biala G. The novel object recognition memory: neurobiology, test procedure, and its modifications. Cogn Process. 2012; 13(2):93–110. https://doi.org/10.1007/s10339-011-0430-z PMID: 22160349
-
(2012)
Cogn Process
, vol.13
, Issue.2
, pp. 93-110
-
-
Antunes, M.1
Biala, G.2
-
53
-
-
4644333560
-
Automated apparatus for quantitation of social approach behaviors in mice
-
PMID: 15344923
-
Nadler JJ, Moy SS, Dold G, Trang D, Simmons N, Perez A, et al. Automated apparatus for quantitation of social approach behaviors in mice. Genes Brain Behav. 2004; 3(5):303–14. https://doi.org/10.1111/j.1601-183X.2004.00071.x PMID: 15344923.
-
(2004)
Genes Brain Behav
, vol.3
, Issue.5
, pp. 303-314
-
-
Nadler, J.J.1
Moy, S.S.2
Dold, G.3
Trang, D.4
Simmons, N.5
Perez, A.6
-
54
-
-
78149501207
-
Chronic gastrointestinal inflammation induces anxiety-like behavior and alters central nervous system biochemistry in mice
-
e1. PMID: 20600016
-
Bercik P, Verdu EF, Foster JA, Macri J, Potter M, Huang X, et al. Chronic gastrointestinal inflammation induces anxiety-like behavior and alters central nervous system biochemistry in mice. Gastroenterology. 2010; 139(6):2102–12 e1. https://doi.org/10.1053/j.gastro.2010.06.063 PMID: 20600016.
-
(2010)
Gastroenterology
, vol.139
, Issue.6
, pp. 2102-2112
-
-
Bercik, P.1
Verdu, E.F.2
Foster, J.A.3
Macri, J.4
Potter, M.5
Huang, X.6
-
55
-
-
4043161248
-
Postnatal microbial colonization programs the hypothalamic-pituitary-adrenal system for stress response in mice
-
PMID: 15133062
-
Sudo N, Chida Y, Aiba Y, Sonoda J, Oyama N, Yu XN, et al. Postnatal microbial colonization programs the hypothalamic-pituitary-adrenal system for stress response in mice. J Physiol. 2004; 558(Pt 1):263–75. https://doi.org/10.1113/jphysiol.2004.063388 PMID: 15133062
-
(2004)
J Physiol
, vol.558
, pp. 263-275
-
-
Sudo, N.1
Chida, Y.2
Aiba, Y.3
Sonoda, J.4
Oyama, N.5
Yu, X.N.6
-
57
-
-
84882610339
-
Gender bias in autoimmunity is influenced by microbiota
-
PMID: 23973225
-
Yurkovetskiy L, Burrows M, Khan AA, Graham L, Volchkov P, Becker L, et al. Gender bias in autoimmunity is influenced by microbiota. Immunity. 2013; 39(2):400–12. https://doi.org/10.1016/j.immuni.2013.08.013 PMID: 23973225
-
(2013)
Immunity
, vol.39
, Issue.2
, pp. 400-412
-
-
Yurkovetskiy, L.1
Burrows, M.2
Khan, A.A.3
Graham, L.4
Volchkov, P.5
Becker, L.6
-
58
-
-
84963682759
-
Regulation of prefrontal cortex myelination by the microbiota
-
PMID: 27045844
-
Hoban AE, Stilling RM, Ryan FJ, Shanahan F, Dinan TG, Claesson MJ, et al. Regulation of prefrontal cortex myelination by the microbiota. Transl Psychiatry. 2016; 6:e774. https://doi.org/10.1038/tp.2016. 42 PMID: 27045844
-
(2016)
Transl Psychiatry
, vol.6
, pp. e774
-
-
Hoban, A.E.1
Stilling, R.M.2
Ryan, F.J.3
Shanahan, F.4
Dinan, T.G.5
Claesson, M.J.6
-
59
-
-
79851494165
-
Bacterial infection causes stress-induced memory dysfunction in mice
-
PMID: 20966022
-
Gareau MG, Wine E, Rodrigues DM, Cho JH, Whary MT, Philpott DJ, et al. Bacterial infection causes stress-induced memory dysfunction in mice. Gut. 2011; 60(3):307–17. https://doi.org/10.1136/gut.2009.202515 PMID: 20966022.
-
(2011)
Gut
, vol.60
, Issue.3
, pp. 307-317
-
-
Gareau, M.G.1
Wine, E.2
Rodrigues, D.M.3
Cho, J.H.4
Whary, M.T.5
Philpott, D.J.6
-
60
-
-
84920997616
-
Cellular commitment in the developing cerebellum
-
25628535
-
Marzban H, Del Bigio MR, Alizadeh J, Ghavami S, Zachariah RM, Rastegar M. Cellular commitment in the developing cerebellum. Front Cell Neurosci. 2014; 8:450. https://doi.org/10.3389/fncel.2014.00450PMID: 25628535
-
(2014)
Front Cell Neurosci
, vol.8
, pp. 450
-
-
Marzban, H.1
Del Bigio, M.R.2
Alizadeh, J.3
Ghavami, S.4
Zachariah, R.M.5
Rastegar, M.6
-
61
-
-
84937641806
-
Adult Hippocampal Neurogenesis Is Regulated by the Microbiome
-
PMID: 25700599
-
Ogbonnaya ES, Clarke G, Shanahan F, Dinan TG, Cryan JF, O’Leary OF. Adult Hippocampal Neurogenesis Is Regulated by the Microbiome. Biol Psychiatry. 2015; 78(4):e7–9. https://doi.org/10.1016/j.biopsych.2014.12.023 PMID: 25700599.
-
(2015)
Biol Psychiatry
, vol.78
, Issue.4
, pp. e7-e9
-
-
Ogbonnaya, E.S.1
Clarke, G.2
Shanahan, F.3
Dinan, T.G.4
Cryan, J.F.5
O’Leary, O.F.6
-
62
-
-
84901756919
-
Pre-clinical models of neurodevelopmental disorders: Focus on the cerebellum
-
PMID: 24523305
-
Shevelkin AV, Ihenatu C, Pletnikov MV. Pre-clinical models of neurodevelopmental disorders: focus on the cerebellum. Rev Neurosci. 2014; 25(2):177–94. https://doi.org/10.1515/revneuro-2013-0049 PMID: 24523305
-
(2014)
Rev Neurosci
, vol.25
, Issue.2
, pp. 177-194
-
-
Shevelkin, A.V.1
Ihenatu, C.2
Pletnikov, M.V.3
-
63
-
-
84874357602
-
Sex Differences in the Gut Microbiome Drive Hormone-Dependent Regulation of Autoimmunity
-
Epub 2013 Jan 17. PMID: 23328391
-
Markle JGM, Frank DN, Mortin-Toth S, Robertson CE, Feazel LM, Rolle-Kampczyk U, et al. Sex Differences in the Gut Microbiome Drive Hormone-Dependent Regulation of Autoimmunity. Science. 2013; 339(6123):1084–8. Epub 2013 Jan 17. https://doi.org/10.1126/science.1233521 PMID: 23328391
-
(2013)
Science
, vol.339
, Issue.6123
, pp. 1084-1088
-
-
Markle, J.G.M.1
Frank, D.N.2
Mortin-Toth, S.3
Robertson, C.E.4
Feazel, L.M.5
Rolle-Kampczyk, U.6
-
64
-
-
84940377140
-
Microbial endocrinology: The interplay between the microbiota and the endocrine system
-
PMID: 25701044
-
Neuman H, Debelius JW, Knight R, Koren O. Microbial endocrinology: the interplay between the microbiota and the endocrine system. FEMS Microbiol Rev. 2015; 39(4):509–21. https://doi.org/10.1093/femsre/fuu010 PMID: 25701044.
-
(2015)
FEMS Microbiol Rev
, vol.39
, Issue.4
, pp. 509-521
-
-
Neuman, H.1
Debelius, J.W.2
Knight, R.3
Koren, O.4
-
65
-
-
84900836517
-
Microbial endocrinology: Host-microbiota neuroendocrine interactions influencing brain and behavior
-
PMID: 24690573
-
Lyte M. Microbial endocrinology: Host-microbiota neuroendocrine interactions influencing brain and behavior. Gut microbes. 2014; 5(3). https://doi.org/10.4161/gmic.28682 PMID: 24690573
-
(2014)
Gut Microbes
, vol.5
, Issue.3
-
-
Lyte, M.1
-
66
-
-
84944682179
-
Dietary Fatty Acids Directly Impact Central Nervous System Autoimmunity via the Small Intestine
-
PMID: 26488817
-
Haghikia A, Jorg S, Duscha A, Berg J, Manzel A, Waschbisch A, et al. Dietary Fatty Acids Directly Impact Central Nervous System Autoimmunity via the Small Intestine. Immunity. 2015; 43(4):817–29. https://doi.org/10.1016/j.immuni.2015.09.007 PMID: 26488817.
-
(2015)
Immunity
, vol.43
, Issue.4
, pp. 817-829
-
-
Haghikia, A.1
Jorg, S.2
Duscha, A.3
Berg, J.4
Manzel, A.5
Waschbisch, A.6
-
67
-
-
84951925415
-
Enteric short-chain fatty acids: Microbial messengers of metabolism, mitochondria, and mind: Implications in autism spectrum disorders
-
PMID: 26031685
-
MacFabe DF. Enteric short-chain fatty acids: microbial messengers of metabolism, mitochondria, and mind: implications in autism spectrum disorders. Microb Ecol Health Dis. 2015; 26:28177. https://doi.org/10.3402/mehd.v26.28177 PMID: 26031685
-
(2015)
Microb Ecol Health Dis
, vol.26
, pp. 28177
-
-
MacFabe, D.F.1
-
68
-
-
84933043202
-
Host microbiota constantly control maturation and function of microglia in the CNS
-
PMID: 26030851
-
Erny D, Hrabe de Angelis AL, Jaitin D, Wieghofer P, Staszewski O, David E, et al. Host microbiota constantly control maturation and function of microglia in the CNS. Nat Neurosci. -2015; 18(7):965–77. https://doi.org/10.1038/nn.4030 PMID: 26030851
-
(2015)
Nat Neurosci
, vol.18
, Issue.7
, pp. 965-977
-
-
Erny, D.1
Hrabe de Angelis, A.L.2
Jaitin, D.3
Wieghofer, P.4
Staszewski, O.5
David, E.6
-
69
-
-
84899892790
-
The short-chain fatty acid acetate reduces appetite via a central homeostatic mechanism
-
PMID: 24781306
-
Frost G, Sleeth ML, Sahuri-Arisoylu M, Lizarbe B, Cerdan S, Brody L, et al. The short-chain fatty acid acetate reduces appetite via a central homeostatic mechanism. Nat Commun. 2014; 5:3611. https://doi.org/10.1038/ncomms4611 PMID: 24781306
-
(2014)
Nat Commun
, vol.5
, pp. 3611
-
-
Frost, G.1
Sleeth, M.L.2
Sahuri-Arisoylu, M.3
Lizarbe, B.4
Cerdan, S.5
Brody, L.6
-
70
-
-
84979609905
-
Cospeciation of gut microbiota with hominids
-
PMID: 27463672
-
Moeller AH, Caro-Quintero A, Mjungu D, Georgiev AV, Lonsdorf EV, Muller MN, et al. Cospeciation of gut microbiota with hominids. Science. 2016; 353(6297):380–2. https://doi.org/10.1126/science. aaf3951 PMID: 27463672
-
(2016)
Science
, vol.353
, Issue.6297
, pp. 380-382
-
-
Moeller, A.H.1
Caro-Quintero, A.2
Mjungu, D.3
Georgiev, A.V.4
Lonsdorf, E.V.5
Muller, M.N.6
|