LotuS: An efficient and user-friendly OTU processing pipeline

Microbiome

Volumn 2, Issue 1, 2014, Pages

  Hildebrand, Falk ^a,b,c   Tadeo, Raul ^a,b,e   Voigt, Anita Y ^c   Bork, Peer ^c,d   Raes, Jeroen ^a,b,e  

^a DEPARTMENT OF PLANT SYSTEMS BIOLOGY   (Belgium)

^b VRIJE UNIVERSITEIT BRUSSEL   (Belgium)

^c EUROPEAN MOLECULAR BIOLOGY LABORATORY   (Germany)

^d MAX DELBRÜCK CENTER FOR MOLECULAR MEDICINE   (Germany)

^e REGA INSTITUTE FOR MEDICAL RESEARCH   (Belgium)

Author keywords

16S rDNA gene; Demultiplexing; Metagenomics; OTU; Pipeline

Indexed keywords

DNA 16S; RIBOSOME DNA; RNA 16S;

ALGORITHM; ARTICLE; CLUSTER ANALYSIS; COMPUTER PROGRAM; DNA SEQUENCE; INFORMATION PROCESSING; LESS OPERATIONAL TAXONOMIC UNITS SCRIPT; MICROBIAL COMMUNITY; MICROBIAL GENETICS; MOLECULAR GENETICS; NEXT GENERATION SEQUENCING; NONHUMAN; PHYLOGENETIC TREE; PRIORITY JOURNAL; TAXONOMY; BIOLOGY; DEVICES; GENETICS; HIGH THROUGHPUT SEQUENCING; METAGENOMICS; MICROFLORA; PROCEDURES; SEQUENCE ANALYSIS; SOFTWARE;

BACTERIA (MICROORGANISMS); OTUS;

ALGORITHMS; COMPUTATIONAL BIOLOGY; DNA, RIBOSOMAL; HIGH-THROUGHPUT NUCLEOTIDE SEQUENCING; METAGENOMICS; MICROBIOTA; RNA, RIBOSOMAL, 16S; SEQUENCE ANALYSIS; SEQUENCE ANALYSIS, DNA; SOFTWARE;

EID: 84930000752     PISSN: None     EISSN: 20492618     Source Type: Journal    
DOI: 10.1186/2049-2618-2-30     Document Type: Article

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