메뉴 건너뛰기




Volumn 285, Issue 1874, 2018, Pages

How new concepts become universal scientific approaches: Insights from citation network analysis of agent-based complex systems science

Author keywords

Bibliographic network; Individual based model; Mechanistic simulation; Reductionism; Science integration; Systems science

Indexed keywords

APPLIED SCIENCE; BIBLIOGRAPHY; DECISION MAKING; INDIVIDUAL-BASED MODEL; METHODOLOGY; NETWORK ANALYSIS; NUMERICAL MODEL; RESEARCH WORK; SIMULATION;

EID: 85043585871     PISSN: 09628452     EISSN: 14712954     Source Type: Journal    
DOI: 10.1098/rspb.2017.2360     Document Type: Article
Times cited : (40)

References (55)
  • 1
    • 33847211035 scopus 로고    scopus 로고
    • The strategy of model-based science
    • Godfrey-Smith P. 2006 The strategy of model-based science. Biol. Philos. 21, 725-740. (doi: 10.1007/s10539-006-9054-6)
    • (2006) Biol. Philos. , vol.21 , pp. 725-740
    • Godfrey-Smith, P.1
  • 2
    • 84971394422 scopus 로고    scopus 로고
    • Spatial self-organization of vegetation subject to climatic stress-insights from a system dynamics-individual-based hybrid model
    • Vincenot CE, Carteni F, Mazzoleni S, Rietkerk M, Giannino F. 2016 Spatial self-organization of vegetation subject to climatic stress-insights from a system dynamics-individual-based hybrid model. Front. Plant Sci. 7, 636. (doi: 10.3389/fpls.2016.00636)
    • (2016) Front. Plant Sci , vol.7 , pp. 636
    • Vincenot, C.E.1    Carteni, F.2    Mazzoleni, S.3    Rietkerk, M.4    Giannino, F.5
  • 3
    • 84928888057 scopus 로고    scopus 로고
    • How spatial resource distribution and memory impact foraging success: A hybrid model and mechanistic index
    • Vincenot CE, Mazzoleni S, Moriya K, Cartenı F, Giannino F. 2015 How spatial resource distribution and memory impact foraging success: a hybrid model and mechanistic index. Ecol. Complex. 22, 139-151. (doi: 10.1016/j.ecocom.2015.03.004)
    • (2015) Ecol. Complex. , vol.22 , pp. 139-151
    • Vincenot, C.E.1    Mazzoleni, S.2    Moriya, K.3    Cartenı, F.4    Giannino, F.5
  • 4
    • 85043601665 scopus 로고    scopus 로고
    • Editorial: Hybrid solutions for the modeling of complex environmental systems
    • Vincenot CE, Mazzoleni S, Parrott L. 2016 Editorial: hybrid solutions for the modeling of complex environmental systems. Front. Environ. Sci. 4, 53. (doi: 10.3389/fenvs.2016.00053)
    • (2016) Front. Environ. Sci , vol.4 , pp. 53
    • Vincenot, C.E.1    Mazzoleni, S.2    Parrott, L.3
  • 5
    • 27744570841 scopus 로고    scopus 로고
    • Pattern-oriented modeling of agent-based complex systems: Lessons from ecology
    • Grimm V et al. 2005 Pattern-oriented modeling of agent-based complex systems: lessons from ecology. Science 310, 987-991. (doi: 10.1126/science. 1116681)
    • (2005) Science , vol.310 , pp. 987-991
    • Grimm, V.1
  • 6
    • 70349451894 scopus 로고    scopus 로고
    • A safe operating space for humanity
    • Rockström J et al. 2009 A safe operating space for humanity. Nature 461, 472-475. (doi: 10.1038/461472a)
    • (2009) Nature , vol.461 , pp. 472-475
    • Rockström, J.1
  • 7
    • 85018882942 scopus 로고    scopus 로고
    • Plant-soil negative feedback explains vegetation dynamics and patterns at multiple scales
    • Vincenot CE, Cartenı F, Bonanomi G, Mazzoleni S, Giannino F. 2017 Plant-soil negative feedback explains vegetation dynamics and patterns at multiple scales. Oikos 126, 1319-1328. (doi: 10. 1111/oik.04149)
    • (2017) Oikos , vol.126 , pp. 1319-1328
    • Vincenot, C.E.1    Cartenı, F.2    Bonanomi, G.3    Mazzoleni, S.4    Giannino, F.5
  • 8
    • 75449108162 scopus 로고    scopus 로고
    • Linking biodiversity and ecosystems: Towards a unifying ecological theory
    • Loreau M. 2010 Linking biodiversity and ecosystems: towards a unifying ecological theory. Phil. Trans. R. Soc. B 365, 49-60. (doi: 10.1098/rstb.2009.0155)
    • (2010) Phil. Trans. R. Soc. B , vol.365 , pp. 49-60
    • Loreau, M.1
  • 9
    • 0141567383 scopus 로고    scopus 로고
    • Population viability analysis: Past, present, future
    • eds SR Beissinger, DR Mc Cullough, Chicago, IL: The University of Chicago Press
    • Beissinger SR. 2002 Population viability analysis: past, present, future. In Population viability analysis (eds SR Beissinger, DR Mc Cullough), pp. 5-17. Chicago, IL: The University of Chicago Press.
    • (2002) Population viability analysis , pp. 5-17
    • Beissinger, S.R.1
  • 10
    • 78049470719 scopus 로고    scopus 로고
    • Theoretical considerations on the combined use of system dynamics and individual-based modeling in ecology
    • Vincenot CE, Giannino F, Rietkerk M, Moriya K, Mazzoleni S. 2011 Theoretical considerations on the combined use of system dynamics and individual-based modeling in ecology. Ecol. Modell. 222, 210-218. (doi: 10.1016/j.ecolmodel. 2010.09.029)
    • (2011) Ecol. Modell. , vol.222 , pp. 210-218
    • Vincenot, C.E.1    Giannino, F.2    Rietkerk, M.3    Moriya, K.4    Mazzoleni, S.5
  • 11
    • 68449086002 scopus 로고    scopus 로고
    • The economy needs agent-based modelling
    • Farmer JD, Foley D. 2009 The economy needs agent-based modelling. Nature 460, 685-686. (doi: 10.1038/460685a)
    • (2009) Nature , vol.460 , pp. 685-686
    • Farmer, J.D.1    Foley, D.2
  • 12
    • 0001164138 scopus 로고
    • New computer models unify ecological theory: Computer simulations show that many ecological patterns can be explained by interactions among individual organisms
    • Huston M, DeAngelis D, Post W. 1988 New computer models unify ecological theory: computer simulations show that many ecological patterns can be explained by interactions among individual organisms. BioScience 38, 682-691. (doi: 10.2307/1310870)
    • (1988) BioScience , vol.38 , pp. 682-691
    • Huston, M.1    DeAngelis, D.2    Post, W.3
  • 13
    • 44349150976 scopus 로고    scopus 로고
    • Using the ODD protocol for describing three agent-based social simulation models of land-use change
    • Polhill JG, Parker D, Brown D, Grimm V. 2008 Using the ODD protocol for describing three agent-based social simulation models of land-use change. J. Artif. Soc. Soc. Simul. 11, 3.
    • (2008) J. Artif. Soc. Soc. Simul , vol.11 , pp. 3
    • Polhill, J.G.1    Parker, D.2    Brown, D.3    Grimm, V.4
  • 16
    • 0034842250 scopus 로고    scopus 로고
    • Understanding the complexity of economic, ecological, and social systems
    • Holling CS. 2001 Understanding the complexity of economic, ecological, and social systems. Ecosystems 4, 390-405. (doi: 10.1007/s10021-001-0101-5)
    • (2001) Ecosystems , vol.4 , pp. 390-405
    • Holling, C.S.1
  • 17
    • 77953878345 scopus 로고    scopus 로고
    • High performance cellular level agent-based simulation with FLAME for the GPU
    • Richmond P, Walker D, Coakley S, Romano D. 2010 High performance cellular level agent-based simulation with FLAME for the GPU. Brief. Bioinform. 11, 334-347. (doi: 10.1093/bib/bbp073)
    • (2010) Brief. Bioinform. , vol.11 , pp. 334-347
    • Richmond, P.1    Walker, D.2    Coakley, S.3    Romano, D.4
  • 18
    • 37649028224 scopus 로고    scopus 로고
    • Finding and evaluating community structure in networks
    • Newman MEJ, Girvan M. 2004 Finding and evaluating community structure in networks. Phys. Rev. E 69, 026113. (doi: 10.1103/PhysRevE.69.026113)
    • (2004) Phys. Rev. E , vol.69 , pp. 026113
    • Newman, M.E.J.1    Girvan, M.2
  • 19
    • 0027842213 scopus 로고
    • Dynamics of age-structured and spatially structured predator-prey interactions: Individual-based models and population-level formulations
    • McCauley E, Wilson WG, de Roos AM. 1993 Dynamics of age-structured and spatially structured predator-prey interactions: individual-based models and population-level formulations. Am. Nat. 142, 412-442. (doi: 10.1086/285547)
    • (1993) Am. Nat. , vol.142 , pp. 412-442
    • McCauley, E.1    Wilson, W.G.2    De Roos, A.M.3
  • 20
    • 0028181670 scopus 로고
    • The rise of the individual-based model in ecology
    • Judson OP. 1994 The rise of the individual-based model in ecology. Trends Ecol. Evol. 9, 9-14. (doi: 10.1016/0169-5347(94)90225-9)
    • (1994) Trends Ecol. Evol. , vol.9 , pp. 9-14
    • Judson, O.P.1
  • 21
    • 0030461611 scopus 로고    scopus 로고
    • Individual-based modelling in ecology: What makes the difference? Trends Ecol
    • Uchmański J, Grimm V. 1996 Individual-based modelling in ecology: what makes the difference? Trends Ecol. Evol. 11, 437-441. (doi: 10.1016/0169-5347(96)20091-6)
    • (1996) Evol. , vol.11 , pp. 437-441
    • Uchmański, J.1    Grimm, V.2
  • 22
    • 34548342938 scopus 로고    scopus 로고
    • Combining experiments with multi-cell agent-based modeling to study biological tissue patterning
    • Thorne BC, Bailey AM, Peirce SM. 2007 Combining experiments with multi-cell agent-based modeling to study biological tissue patterning. Brief. Bioinform. 8, 245-257. (doi: 10.1093/bib/bbm024)
    • (2007) Brief. Bioinform. , vol.8 , pp. 245-257
    • Thorne, B.C.1    Bailey, A.M.2    Peirce, S.M.3
  • 23
    • 28344457777 scopus 로고    scopus 로고
    • Multi-agent systems for the simulation of land-use and land-cover change: A review
    • Parker DC, Manson SM, Janssen MA, Hoffmann MJ, Deadman P. 2003 Multi-agent systems for the simulation of land-use and land-cover change: a review. Ann. Assoc. Am. Geogr. 93, 314-337. (doi: 10.1111/1467-8306.9302004)
    • (2003) Ann. Assoc. Am. Geogr. , vol.93 , pp. 314-337
    • Parker, D.C.1    Manson, S.M.2    Janssen, M.A.3    Hoffmann, M.J.4    Deadman, P.5
  • 24
    • 0037076425 scopus 로고    scopus 로고
    • Agent-based modeling: Methods and techniques for simulating human systems
    • Bonabeau E. 2002 Agent-based modeling: methods and techniques for simulating human systems. Proc. Natl Acad. Sci. USA 99, 7280-7287. (doi: 10.1073/pnas.082080899)
    • (2002) Proc. Natl Acad. Sci. USA , vol.99 , pp. 7280-7287
    • Bonabeau, E.1
  • 25
    • 0036025778 scopus 로고    scopus 로고
    • From factors to factors: Computational sociology and agent-based modeling
    • Macy MW, Willer R. 2002 From factors to factors: computational sociology and agent-based modeling. Annu. Rev. Sociol. 28, 143-166. (doi: 10. 1146/annurev.soc.28.110601.141117)
    • (2002) Annu. Rev. Sociol. , vol.28 , pp. 143-166
    • Macy, M.W.1    Willer, R.2
  • 26
    • 3042695979 scopus 로고    scopus 로고
    • Multi-agent simulations and ecosystem management: A review
    • Bousquet F, Le Page C. 2004 Multi-agent simulations and ecosystem management: a review. Ecol. Modell. 176, 313-332. (doi: 10.1016/j. ecolmodel.2004.01.011)
    • (2004) Ecol. Modell. , vol.176 , pp. 313-332
    • Bousquet, F.1    Le Page, C.2
  • 27
    • 33748151495 scopus 로고    scopus 로고
    • A standard protocol for describing individual-based and agent-based models
    • Grimm V et al. 2006 A standard protocol for describing individual-based and agent-based models. Ecol. Modell. 198, 115-126. (doi: 10.1016/j.ecolmodel.2006.04.023)
    • (2006) Ecol. Modell. , vol.198 , pp. 115-126
    • Grimm, V.1
  • 28
    • 0033557660 scopus 로고    scopus 로고
    • Ten years of individual-based modelling in ecology: What have we learned and what could we learn in the future? Ecol
    • Grimm V. 1999 Ten years of individual-based modelling in ecology: what have we learned and what could we learn in the future? Ecol. Modell. 115, 129-148. (doi: 10.1016/S0304-3800(98)00188-4)
    • (1999) Modell. , vol.115 , pp. 129-148
    • Grimm, V.1
  • 29
    • 30344446670 scopus 로고    scopus 로고
    • Individual-based modeling of ecological and evolutionary processes
    • DeAngelis DL, Mooij WM. 2005 Individual-based modeling of ecological and evolutionary processes. Annu. Rev. Ecol. Evol. Syst. 36, 147-168. (doi: 10. 1146/annurev.ecolsys.36.102003.152644)
    • (2005) Annu. Rev. Ecol. Evol. Syst. , vol.36 , pp. 147-168
    • DeAngelis, D.L.1    Mooij, W.M.2
  • 33
    • 84935831984 scopus 로고    scopus 로고
    • Defining and identifying sleeping beauties in science
    • Ke Q, Ferrara E, Radicchi F, Flammini A. 2015 Defining and identifying sleeping beauties in science. Proc. Natl Acad. Sci. USA 112, 7426-7431. (doi: 10.1073/pnas.1424329112)
    • (2015) Proc. Natl Acad. Sci. USA , vol.112 , pp. 7426-7431
    • Ke, Q.1    Ferrara, E.2    Radicchi, F.3    Flammini, A.4
  • 34
    • 84934784101 scopus 로고    scopus 로고
    • Boundary object or bridging concept? A citation network analysis of resilience
    • Baggio JA, Brown K, Hellebrandt D. 2015 Boundary object or bridging concept? A citation network analysis of resilience. Ecol. Soc. 20.
    • (2015) Ecol. Soc , pp. 20
    • Baggio, J.A.1    Brown, K.2    Hellebrandt, D.3
  • 35
    • 84869869693 scopus 로고    scopus 로고
    • Flows of research manuscripts among scientific journals reveal hidden submission patterns
    • Calcagno V, Demoinet E, Gollner K, Guidi L, Ruths D, de Mazancourt C. 2012 Flows of research manuscripts among scientific journals reveal hidden submission patterns. Science 338, 1065-1069. (doi: 10.1126/science.1227833)
    • (2012) Science , vol.338 , pp. 1065-1069
    • Calcagno, V.1    Demoinet, E.2    Gollner, K.3    Guidi, L.4    Ruths, D.5    De Mazancourt, C.6
  • 36
    • 77955641547 scopus 로고    scopus 로고
    • Stability of graph communities across time scales
    • USA, 760
    • Delvenne J-C, Yaliraki SN, Barahona M. 2010 Stability of graph communities across time scales. Proc. Natl Acad. Sci. USA 107, 12 755-12 760. (doi: 10.1073/pnas.0903215107)
    • (2010) Proc. Natl Acad. Sci , vol.107 , Issue.12 , pp. 712-755
    • Delvenne, J.-C.1    Yaliraki, S.N.2    Barahona, M.3
  • 37
    • 84926156083 scopus 로고    scopus 로고
    • Bibliometrics/citation networks
    • ed. GA Barnett, Beverley Hills, CA: Sage
    • Leydesdorff L. 2011 Bibliometrics/citation networks. In The encyclopedia of social networks (ed. GA Barnett), pp. 72-74. Beverley Hills, CA: Sage.
    • (2011) The encyclopedia of social networks , pp. 72-74
    • Leydesdorff, L.1
  • 38
    • 85043603370 scopus 로고    scopus 로고
    • Equation-based versus agentbased modeling
    • Institute for Systems Sciences, Innovation and Sustainability Research at the Karl-Franzens University Graz, Austria. See
    • Füllsack M. 2013 Equation-based versus agentbased modeling. In Systems sciences at ISIS. Institute for Systems Sciences, Innovation and Sustainability Research at the Karl-Franzens University Graz, Austria. See http://systems-sciences. uni-graz.at/etextbook/.
    • (2013) Systems sciences at ISIS
    • Füllsack, M.1
  • 39
    • 84879287149 scopus 로고    scopus 로고
    • Agent-based modeling: A systematic assessment of use cases and requirements for enhancing pharmaceutical research and development productivity
    • Hunt CA, Kennedy RC, Kim SHJ, Ropella GEP. 2013 Agent-based modeling: a systematic assessment of use cases and requirements for enhancing pharmaceutical research and development productivity. Wiley Interdiscip. Rev. Syst. Biol. Med. 5, 461-480. (doi: 10.1002/wsbm.1222)
    • (2013) Wiley Interdiscip. Rev. Syst. Biol. Med. , vol.5 , pp. 461-480
    • Hunt, C.A.1    Kennedy, R.C.2    Kim, S.H.J.3    Ropella, G.E.P.4
  • 40
    • 84922742551 scopus 로고    scopus 로고
    • Agent-based modeling of noncommunicable diseases: A systematic review
    • Nianogo RA, Arah OA. 2015 Agent-based modeling of noncommunicable diseases: a systematic review. Am. J. Public Health 105, e20-e31. (doi: 10.2105/AJPH.2014.302426)
    • (2015) Am. J. Public Health , vol.105 , pp. e20-e31
    • Nianogo, R.A.1    Arah, O.A.2
  • 41
    • 84863881449 scopus 로고    scopus 로고
    • RNETLOGO: An R package for running and exploring individualbased models implemented in NETLOGO
    • Thiele JC, Kurth W, Grimm V. 2012 RNETLOGO: an R package for running and exploring individualbased models implemented in NETLOGO. Methods Ecol. Evol. 3, 480-483. (doi: 10.1111/j.2041-210X.2011. 00180.x)
    • (2012) Methods Ecol. Evol. , vol.3 , pp. 480-483
    • Thiele, J.C.1    Kurth, W.2    Grimm, V.3
  • 44
    • 82755174155 scopus 로고    scopus 로고
    • Pattern-oriented modelling: A ‘multi-scope’ for predictive systems ecology
    • Grimm V, Railsback SF. 2012 Pattern-oriented modelling: a ‘multi-scope’ for predictive systems ecology. Phil. Trans. R. Soc. Lond. B 367, 298-310. (doi: 10.1098/rstb.2011.0180)
    • (2012) Phil. Trans. R. Soc. Lond. B , vol.367 , pp. 298-310
    • Grimm, V.1    Railsback, S.F.2
  • 45
    • 6144253216 scopus 로고
    • Strong inference: Certain systematic methods of scientific thinking may produce much more rapid progress than others
    • Platt JR. 1964 Strong inference: certain systematic methods of scientific thinking may produce much more rapid progress than others. Science 146, 347-353. (doi: 10.1126/science.146.3642.347)
    • (1964) Science , vol.146 , pp. 347-353
    • Platt, J.R.1
  • 47
    • 0004108421 scopus 로고
    • Paris, France: Hermann
    • Wiener N. 1948 Cybernetics. Paris, France: Hermann.
    • (1948) Cybernetics
    • Wiener, N.1
  • 49
    • 17844365562 scopus 로고    scopus 로고
    • Network theory: The emergence of the creative enterprise
    • Barabási A-L. 2005 Network theory: the emergence of the creative enterprise. Science 308, 639-641. (doi: 10.1126/science.1112554)
    • (2005) Science , vol.308 , pp. 639-641
    • Barabási, A.-L.1
  • 51
    • 85043583331 scopus 로고    scopus 로고
    • Diderot: Bibliographic network analysis
    • R package version 0.12, See
    • Vincenot CE. 2017 Diderot: bibliographic network analysis. R package version 0.12. The Comprehensive R Archive Network (CRAN). See https://cran.r-project.org/web/packages/Diderot/.
    • (2017) The Comprehensive R Archive Network (CRAN)
    • Vincenot, C.E.1
  • 52
    • 18744389789 scopus 로고    scopus 로고
    • Assortative mixing in networks
    • Newman MEJ. 2002 Assortative mixing in networks. Phys. Rev. Lett. 89, 208701. (doi: 10.1103/PhysRevLett.89.208701)
    • (2002) Phys. Rev. Lett , vol.89 , pp. 208701
    • Newman, M.E.J.1
  • 54
    • 84865730611 scopus 로고
    • A set of measures of centrality based on betweenness
    • Freeman LC. 1977 A set of measures of centrality based on betweenness. Sociometry 35-41. (doi: 10. 2307/3033543)
    • (1977) Sociometry , pp. 35-41
    • Freeman, L.C.1
  • 55
    • 85043602912 scopus 로고    scopus 로고
    • Data from: How new concepts become universal scientific approaches: Insights from citation network analysis of agent-based complex systems science
    • Vincenot CE. 2018 Data from: How new concepts become universal scientific approaches: insights from citation network analysis of agent-based complex systems science. Dryad Digital Repository. (http://dx.doi.org/10.5061/dryad.19nr2)
    • (2018) Dryad Digital Repository
    • Vincenot, C.E.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.