Ultrafast confocal fluorescence microscopy beyond the fluorescence lifetime limit

Optica

Volumn 5, Issue 2, 2018, Pages 117-126

  Mikami, Hideharu ^a   Harmon, Jeffrey ^a   Kobayashi, Hirofumi ^a   Hamad, Syed ^a   Wang, Yisen ^a,b   Iwata, Osamu ^c   Suzuki, Kengo ^c   Ito, Takuro ^d   Aisaka, Yuri ^e   Kutsuna, Natsumaro ^e   Nagasawa, Kazumichi ^a   Watarai, Hiroshi ^a   Ozeki, Yasuyuki ^a   Goda, Keisuke ^a,d,f  

^a UNIVERSITY OF TOKYO   (Japan)

^b TIANJIN UNIVERSITY   (China)

^c 2F Yokohama Bio Industry Center   (Japan)

^d JAPAN SCIENCE AND TECHNOLOGY AGENCY   (Japan)

^e LPIXEL INC   (Japan)

^f UNIVERSITY OF CALIFORNIA   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

FLUORESCENCE; FLUORESCENCE MICROSCOPY; FLUOROPHORES; MICROSCOPES;

CONFOCAL FLUORESCENCE IMAGING; CONFOCAL FLUORESCENCE MICROSCOPE; CONFOCAL FLUORESCENCE MICROSCOPY; FLUORESCENCE LIFETIMES; HIGH SPATIAL RESOLUTION; LASER SCANNING CONFOCAL FLUORESCENCE MICROSCOPY; SPECTRAL EFFICIENCIES; TEMPORAL RESOLUTION;

FLUORESCENCE IMAGING;

EID: 85042284500     PISSN: 23342536     EISSN: None     Source Type: Journal    
DOI: 10.1364/OPTICA.5.000117     Document Type: Article

References (41)

1. J. B. Pawley, ed., Handbook of Biological Confocal Microscopy, 2nd ed. (Springer, 1995).
2. H. R. Petty, “Spatiotemporal chemical dynamics in living cells: from information trafficking to cell physiology,” Biosystems 83, 217–224 (2006).
3. J. P. Nguyen, F. B. Shipley, A. N. Linder, G. S. Plummer, M. Liu, S. U. Setru, J. W. Shaevitz, and A. M. Leifer, “Whole-brain calcium imaging with cellular resolution in freely behaving Caenorhabditis elegans,” Proc. Natl. Acad. Sci. USA 113, E1074–E1081 (2015).
4. A. L. Polglase, W. J. McLaren, S. A. Skinner, R. Kiesslich, M. F. Neurath, and P. M. Delaney, “A fluorescence confocal endomicroscope for in vivo microscopy of the upper- and the lower-GI tract,” Gastrointest. Endosc. 62, 686–695 (2005).
5. D. C. Adler, Y. Chen, R. Huber, J. Schmitt, J. Connolly, and J. G. Fujimoto, “Three-dimensional endomicroscopy using optical coherence tomography,” Nat. Photonics 1, 709–716 (2007).
6. P. K. Chattopadhyay, T. M. Gierahn, M. Roederer, and J. C. Love, “Single-cell technologies for monitoring immune systems,” Nat. Immunol. 15, 128–135 (2014).
7. D. A. Basiji, W. E. Ortyn, L. Liang, V. Venkatachalam, and P. Morrissey, “Cellular image analysis and imaging by flow cytometry,” Clin. Chem. Lab. Med. 27, 653–670 (2007).
8. K. Goda, A. Ayazi, D. R. Gossett, J. Sadasivam, C. K. Lonappan, E. Sollier, A. M. Fard, S. C. Hur, J. Adam, C. Murray, C. Wang, N. Brackbill, D. Di Carlo, and B. Jalali, “High-throughput single-microparticle imaging flow analyzer,” Proc. Natl. Acad. Sci. USA 109, 11630–11635 (2012).
9. M. Y. Berezin and S. Achilefu, “Fluorescence lifetime measurements and biological imaging,” Chem. Rev. 110, 2641–2684 (2010).
10. P. W. Winter and H. Shroff, “Faster fluorescence microscopy: advances in high speed biological imaging,” Curr. Opin. Chem. Biol. 20, 46–53 (2014).
11. S. Choi, P. Kim, R. Boutilier, M. Y. Kim, Y. J. Lee, and H. Lee, “Development of a high speed laser scanning confocal microscope with an acquisition rate up to 200 frames per second,” Opt. Express 21, 23611–23618 (2013).
12. A. Draaijer and P. M. Houpt, “A standard video-rate confocal laser-scanning reflection and fluorescence microscope,” Scanning 10, 139–145 (1988).
13. “VTi—VT-Eye,” http://www.visitech.co.uk/vt-eye.html.
14. V. Bansal, S. Patel, and P. Saggau, “High-speed addressable confocal microscopy for functional imaging of cellular activity,” J. Biomed. Opt. 11, 34003 (2006).
15. F. Keilmann, C. Gohle, and R. Holzwarth, “Time-domain mid-infrared frequency-comb spectrometer,” Opt. Lett. 29, 1542–1544 (2004).
16. B. Bernhardt, A. Ozawa, P. Jacquet, M. Jacquey, Y. Kobayashi, T. Udem, R. Holzwarth, G. Guelachvili, T. W. Hänsch, and N. Picqué, “Cavity-enhanced dual-comb spectroscopy,” Nat. Photonics 4, 55–57 (2010).
17. I. Coddington, N. Newbury, and W. Swann, “Dual-comb spectroscopy,” Optica 3, 414–426 (2016).
18. S. Schiller, “Spectrometry with frequency combs,” Opt. Lett. 27, 766–768 (2002).
19. E. D. Diebold, B. W. Buckley, D. R. Gossett, and B. Jalali, “Digitally synthesized beat frequency multiplexing for sub-millisecond fluorescence microscopy,” Nat. Photonics 7, 806–810 (2013).
20. G. Futia, P. Schlup, D. G. Winters, and R. A. Bartels, “Spatially-chirped modulation imaging of absorption and fluorescent objects on single-element optical detector,” Opt. Express 19, 1626–1640 (2011).
21. C.-S. Liao, P. Wang, P. Wang, J. Li, H. J. Lee, G. Eakins, and J.-X. Cheng, “Spectrometer-free vibrational imaging by retrieving stimulated Raman signal from highly scattered photons,” Sci. Adv. 1, e1500738 (2015).
22. S. S. Howard, A. Straub, N. G. Horton, D. Kobat, and C. Xu, “Frequency-multiplexed in vivo multiphoton phosphorescence lifetime microscopy,” Nat. Photonics 7, 33–37 (2012).
23. F. Wu, X. Zhang, J. Y. Cheung, K. Shi, Z. Liu, C. Luo, S. Yin, and P. Ruffin, “Frequency division multiplexed multichannel high-speed fluorescence confocal microscope,” Biophys. J. 91, 2290–2296 (2006).
24. S. Weinstein and P. Ebert, “Data transmission by frequency-division multiplexing using the discrete Fourier transform,” IEEE Trans. Commun. Technol. 19, 628–634 (1971).
25. C. J. R. Sheppard and X. Q. Mao, “Confocal microscopes with slit apertures,” J. Mod. Opt. 35, 1169–1185 (1988).
26. S. Kawata, R. Arimoto, and O. Nakamura, “Three-dimensional optical-transfer-function analysis for a laser-scan fluorescence microscope with an extended detector,” J. Opt. Soc. Am. A 8, 171–175 (1991).
27. L. Hanzo, S. X. Ng, T. Keller, and W. Webb, Quadrature Amplitude Modulation: From Basics to Adaptive Trellis-Coded, Turbo-Equalised and Space-Time Coded OFDM, CDMA and MC-CDMA Systems, 2nd ed. (Wiley, 2004), p. 1136.
28. R. van Nee and R. Prasad, OFDM Wireless Multimedia Communications (Artech House, 2000).
29. W. Webb and L. Hanzo, Modern Quadrature Amplitude Modulation: Principles and Applications for Fixed and Wireless Communications (IEEE, 1994).
30. J. R. Lakowicz, Principles of Fluorescence Spectroscopy, 3rd ed. (Springer, 2006).
31. H. Choi, D. S. Tzeranis, J. W. Cha, P. Clémenceau, S. J. G. de Jong, L. K. van Geest, J. H. Moon, I. V. Yannas, and P. T. C. So, “3D-resolved fluorescence and phosphorescence lifetime imaging using temporal focusing wide-field two-photon excitation,” Opt. Express 20, 26219– 26235 (2012).
32. P. Herman, B. P. Maliwal, H.-J. Lin, and J. R. Lakowicz, “Frequency-domain fluorescence microscopy with the LED as a light source,” J. Microsc. 203, 176–181 (2001).
33. M. Cramer and J. Myers, “Growth and photosynthetic characteristics of Euglena gracilis,” Arch. Mikrobiol. 17, 384–402 (1952).
34. R. Schantz, M.-L. Schantz, and H. Duranton, “Changes in amino acid and peptide composition of Euglena gracilis cells during chloroplast development,” Plant Sci. Lett. 5, 313–324 (1975).
35. J. Wu, A. H. L. Tang, A. T. Y. Mok, W. Yan, G. C. F. Chan, K. K. Y. Wong, and K. K. Tsia, “Multi-MHz laser-scanning single-cell fluorescence microscopy by spatiotemporally encoded virtual source array,” Biomed. Opt. Express 8, 4160–4171 (2017).
36. L. Wang, ed., Support Vector Machines: Theory and Applications (Springer, 2005).
37. N. Cristianini and J. Shawe-Taylor, An Introduction to Support Vector Machines: And Other Kernel-Based Learning Methods (Cambridge University, 2000).
38. Y. Wakisaka, Y. Suzuki, O. Iwata, A. Nakashima, T. Ito, M. Hirose, R. Domon, M. Sugawara, N. Tsumura, H. Watarai, T. Shimobaba, K. Suzuki, K. Goda, and Y. Ozeki, “Probing the metabolic heterogeneity of live Euglena gracilis with stimulated Raman scattering microscopy,” Nat. Microbiol. 1, 16124 (2016).
39. T. Blasi, H. Hennig, H. D. Summers, F. J. Theis, J. Cerveira, J. O. Patterson, D. Davies, A. Filby, A. E. Carpenter, and P. Rees, “Label-free cell cycle analysis for high-throughput imaging flow cytometry,” Nat. Commun. 7, 10256 (2016).
40. C. Chang, D. Sud, and M. Mycek, “Fluorescence lifetime imaging microscopy,” Methods Cell Biol. 81, 495–524 (2007).
41. P. Bastiaens, “Fluorescence lifetime imaging microscopy: spatial resolution of biochemical processes in the cell,” Trends Cell Biol. 9, 48–52 (1999).