-
1
-
-
84875276180
-
The burden of inflammatory bowel disease in Europe
-
Burisch, J., Jess, T., Martinato, M. &Lakatos, P. L. The burden of inflammatory bowel disease in Europe. J. Crohns Colitis 7, 322-337 (2013).
-
(2013)
J. Crohns Colitis
, vol.7
, pp. 322-337
-
-
Burisch, J.1
Jess, T.2
Martinato, M.3
Lakatos, P.L.4
-
2
-
-
22044445381
-
Inflammatory bowel disease in children and adolescents: Recommendations for diagnosis\-The Porto criteria
-
IBD Working Group of the European Society for Paediatric Gastroenterology, Hepatology and Nutrition.
-
IBD Working Group of the European Society for Paediatric Gastroenterology, Hepatology and Nutrition. Inflammatory bowel disease in children and adolescents: recommendations for diagnosis\-The Porto criteria. J. Pediatr. Gastr. Nutr. 41, 1-7 (2005).
-
(2005)
J. Pediatr. Gastr. Nutr.
, vol.41
, pp. 1-7
-
-
-
3
-
-
84949091936
-
The global burden of IBD: From 2015 to 2025
-
Kaplan, G. G. The global burden of IBD: from 2015 to 2025. Nat. Rev. Gastro. Hepat. 12, 720-727 (2015).
-
(2015)
Nat. Rev. Gastro. Hepat.
, vol.12
, pp. 720-727
-
-
Kaplan, G.G.1
-
4
-
-
79955935457
-
Intestinal microbiota in inflammatory bowel disease: Friend of foe?
-
Fava, F. &Danese, S. Intestinal microbiota in inflammatory bowel disease: friend of foe? World J. Gastroentero. 17, 557-566 (2011).
-
(2011)
World J. Gastroentero.
, vol.17
, pp. 557-566
-
-
Fava, F.1
Danese, S.2
-
5
-
-
84893110419
-
Role of the gut microbiota in inflammatory bowel disease pathogenesis: What have we learnt in the past 10 years?
-
Hold, G. L. et al. Role of the gut microbiota in inflammatory bowel disease pathogenesis: what have we learnt in the past 10 years? World J. Gastroentero. 20, 1192-1210 (2014).
-
(2014)
World J. Gastroentero.
, vol.20
, pp. 1192-1210
-
-
Hold, G.L.1
-
6
-
-
84866549438
-
Dysfunction of the intestinal microbiome in inflammatory bowel disease and treatment
-
Morgan, X. C. et al. Dysfunction of the intestinal microbiome in inflammatory bowel disease and treatment. Genome Biol. 13, R79 (2012).
-
(2012)
Genome Biol.
, vol.13
, pp. R79
-
-
Morgan, X.C.1
-
7
-
-
84896092821
-
The treatment-naive microbiome in new-onset Crohn's disease
-
Gevers, D. et al. The treatment-naive microbiome in new-onset Crohn's disease. Cell Host Microbe 15, 382-392 (2014).
-
(2014)
Cell Host Microbe
, vol.15
, pp. 382-392
-
-
Gevers, D.1
-
8
-
-
34547684651
-
Host-mediated inflammation disrupts the intestinal microbiota and promotes the overgrowth of Enterobacteriaceae
-
Lupp, C. et al. Host-mediated inflammation disrupts the intestinal microbiota and promotes the overgrowth of Enterobacteriaceae. Cell Host Microbe 2, 119-129 (2007).
-
(2007)
Cell Host Microbe
, vol.2
, pp. 119-129
-
-
Lupp, C.1
-
9
-
-
78650099360
-
Disease phenotype and genotype are associated with shifts in intestinal-associated microbiota in inflammatory bowel diseases
-
Frank, D. N. et al. Disease phenotype and genotype are associated with shifts in intestinal-associated microbiota in inflammatory bowel diseases. Inflamm. Bowel Dis. 17, 179-184 (2011).
-
(2011)
Inflamm. Bowel Dis.
, vol.17
, pp. 179-184
-
-
Frank, D.N.1
-
10
-
-
84898809123
-
The microbiome in inflammatory bowel disease: Current status and the future ahead
-
Kostic, A. D., Xavier, R. J. &Gevers, D. The microbiome in inflammatory bowel disease: current status and the future ahead. Gastroenterology 146, 1489-1499 (2014).
-
(2014)
Gastroenterology
, vol.146
, pp. 1489-1499
-
-
Kostic, A.D.1
Xavier, R.J.2
Gevers, D.3
-
11
-
-
67649703525
-
Lactobacillus casei downregulates commensals' inflammatory signals in Crohn's disease mucosa
-
Llopis, M. et al. Lactobacillus casei downregulates commensals' inflammatory signals in Crohn's disease mucosa. Inflamm. Bowel Dis. 15, 275-283 (2009).
-
(2009)
Inflamm. Bowel Dis.
, vol.15
, pp. 275-283
-
-
Llopis, M.1
-
12
-
-
70349488325
-
Low counts of Faecalibacterium prausnitzii in colitis microbiota
-
Sokol, H. et al. Low counts of Faecalibacterium prausnitzii in colitis microbiota. Inflamm. Bowel Dis. 15, 1183-1189 (2009).
-
(2009)
Inflamm. Bowel Dis.
, vol.15
, pp. 1183-1189
-
-
Sokol, H.1
-
13
-
-
55949124035
-
Faecalibacterium prausnitzii is an anti-inflammatory commensal bacterium identified by gut microbiota analysis of Crohn disease patients
-
Sokol, H. et al. Faecalibacterium prausnitzii is an anti-inflammatory commensal bacterium identified by gut microbiota analysis of Crohn disease patients. Proc. Natl Acad. Sci. USA 105, 16731-16736 (2008).
-
(2008)
Proc. Natl Acad. Sci. USA
, vol.105
, pp. 16731-16736
-
-
Sokol, H.1
-
14
-
-
85012903225
-
Dynamics of the human gut microbiome in inflammatory bowel disease
-
Halfvarson, J. et al. Dynamics of the human gut microbiome in inflammatory bowel disease. Nat. Microbiol. 2, 17004 (2017).
-
(2017)
Nat. Microbiol.
, vol.2
, pp. 17004
-
-
Halfvarson, J.1
-
15
-
-
84944220492
-
Inflammation, antibiotics, and diet as environmental stressors of the gut microbiome in pediatric Crohn's disease
-
Lewis, J. D. et al. Inflammation, antibiotics, and diet as environmental stressors of the gut microbiome in pediatric Crohn's disease. Cell Host Microbe 18, 489-500 (2015).
-
(2015)
Cell Host Microbe
, vol.18
, pp. 489-500
-
-
Lewis, J.D.1
-
16
-
-
84968901892
-
Population-based metagenomics analysis reveals markers for gut microbiome composition and diversity
-
Zhernakova, A. et al. Population-based metagenomics analysis reveals markers for gut microbiome composition and diversity. Science 352, 565-569 (2016).
-
(2016)
Science
, vol.352
, pp. 565-569
-
-
Zhernakova, A.1
-
17
-
-
84904048875
-
A decrease of the butyrate-producing species Roseburia hominis and Faecalibacterium prausnitzii defines dysbiosis in patients with ulcerative colitis
-
Machiels, K. et al. A decrease of the butyrate-producing species Roseburia hominis and Faecalibacterium prausnitzii defines dysbiosis in patients with ulcerative colitis. Gut 63, 1275-1283 (2014).
-
(2014)
Gut
, vol.63
, pp. 1275-1283
-
-
Machiels, K.1
-
18
-
-
85020106425
-
Host-microbial cross-talk in inflammatory bowel disease
-
Nagao-Kitamoto, H. &Kamada, N. Host-microbial cross-talk in inflammatory bowel disease. Immune Netw. 17, 1-12 (2017).
-
(2017)
Immune Netw.
, vol.17
, pp. 1-12
-
-
Nagao-Kitamoto, H.1
Kamada, N.2
-
19
-
-
77956515952
-
Transcriptional activity of the dominant gut mucosal microbiota in chronic inflammatory bowel disease patients
-
Rehman, A. et al. Transcriptional activity of the dominant gut mucosal microbiota in chronic inflammatory bowel disease patients. J. Med. Microbiol. 59, 1114-1122 (2010).
-
(2010)
J. Med. Microbiol.
, vol.59
, pp. 1114-1122
-
-
Rehman, A.1
-
20
-
-
84864992687
-
Common biostructure of the colonic microbiota in neuroendocrine tumors and Crohn's disease and the effect of therapy
-
Dorffel, Y., Swidsinski, A., Loening-Baucke, V., Wiedenmann, B. &Pavel, M. Common biostructure of the colonic microbiota in neuroendocrine tumors and Crohn's disease and the effect of therapy. Inflamm. Bowel Dis. 18, 1663-1671 (2012).
-
(2012)
Inflamm. Bowel Dis.
, vol.18
, pp. 1663-1671
-
-
Dorffel, Y.1
Swidsinski, A.2
Loening-Baucke, V.3
Wiedenmann, B.4
Pavel, M.5
-
21
-
-
79956078164
-
Commensal Bacteroides species induce colitis in host-genotype-specific fashion in a mouse model of inflammatory bowel disease
-
Bloom, S. M. et al. Commensal Bacteroides species induce colitis in host-genotype-specific fashion in a mouse model of inflammatory bowel disease. Cell Host Microbe 9, 390-403 (2011).
-
(2011)
Cell Host Microbe
, vol.9
, pp. 390-403
-
-
Bloom, S.M.1
-
22
-
-
79953748870
-
Dysbiosis of the faecal microbiota in patients with Crohn's disease and their unaffected relatives
-
Joossens, M. et al. Dysbiosis of the faecal microbiota in patients with Crohn's disease and their unaffected relatives. Gut 60, 631-637 (2011).
-
(2011)
Gut
, vol.60
, pp. 631-637
-
-
Joossens, M.1
-
23
-
-
84955172629
-
Microorganisms linked to inflammatory bowel diseaseassociated dysbiosis differentially impact host physiology in gnotobiotic mice
-
Hoffmann, T. W. et al. Microorganisms linked to inflammatory bowel diseaseassociated dysbiosis differentially impact host physiology in gnotobiotic mice. ISME J. 10, 460-477 (2016).
-
(2016)
ISME J.
, vol.10
, pp. 460-477
-
-
Hoffmann, T.W.1
-
24
-
-
84864037467
-
Metabolic reconstruction for metagenomic data and its application to the human microbiome
-
Abubucker, S. et al. Metabolic reconstruction for metagenomic data and its application to the human microbiome. PLoS Comput. Biol. 8, e1002358 (2012).
-
(2012)
PLoS Comput. Biol.
, vol.8
, pp. e1002358
-
-
Abubucker, S.1
-
25
-
-
84924690678
-
Gut microbiome development along the colorectal adenomacarcinoma sequence
-
Feng, Q. et al. Gut microbiome development along the colorectal adenomacarcinoma sequence. Nat. Commun. 6, 6528 (2015).
-
(2015)
Nat. Commun.
, vol.6
, pp. 6528
-
-
Feng, Q.1
-
26
-
-
84878911418
-
Characterization of adherent bacteroidales from intestinal biopsies of children and young adults with inflammatory bowel disease
-
Zitomersky, N. L. et al. Characterization of adherent bacteroidales from intestinal biopsies of children and young adults with inflammatory bowel disease. PLoS ONE 8, e63686 (2013).
-
(2013)
PLoS ONE
, vol.8
, pp. e63686
-
-
Zitomersky, N.L.1
-
27
-
-
0345328118
-
Dialister invisus sp
-
Downes, J., Munson, M. &Wade, W. G. Dialister invisus sp. nov., isolated from the human oral cavity. Int. J. Syst. Evol. Micr. 53, 1937-1940 (2003).
-
(2003)
Nov., Isolated from the Human Oral Cavity. Int. J. Syst. Evol. Micr.
, vol.53
, pp. 1937-1940
-
-
Downes, J.1
Munson, M.2
Wade, W.G.3
-
28
-
-
84989818626
-
Association between intestinal permeability and faecal microbiota composition in Italian children with beta cell autoimmunity at risk for type 1 diabetes
-
Maffeis, C. et al. Association between intestinal permeability and faecal microbiota composition in Italian children with beta cell autoimmunity at risk for type 1 diabetes. Diabetes Metab. Res. Rev. 32, 700-709 (2016).
-
(2016)
Diabetes Metab. Res. Rev.
, vol.32
, pp. 700-709
-
-
Maffeis, C.1
-
29
-
-
71749096599
-
Adenosine: An immune modulator of inflammatory bowel diseases
-
Ye, J. H. &Rajendran, V. M. Adenosine: an immune modulator of inflammatory bowel diseases. World J. Gastroentero. 15, 4491-4498 (2009).
-
(2009)
World J. Gastroentero.
, vol.15
, pp. 4491-4498
-
-
Ye, J.H.1
Rajendran, V.M.2
-
30
-
-
84888385324
-
Immunity, inflammation and cancer: A leading role for adenosine
-
Antonioli, L., Blandizzi, C., Pacher, P. &Hasko, G. Immunity, inflammation and cancer: a leading role for adenosine. Nat. Rev. Cancer 13, 842-857 (2013).
-
(2013)
Nat. Rev. Cancer
, vol.13
, pp. 842-857
-
-
Antonioli, L.1
Blandizzi, C.2
Pacher, P.3
Hasko, G.4
-
31
-
-
84947611911
-
Guanosine inhibits LPS-induced pro-inflammatory response and oxidative stress in hippocampal astrocytes through the heme oxygenase-1 pathway
-
Bellaver, B. et al. Guanosine inhibits LPS-induced pro-inflammatory response and oxidative stress in hippocampal astrocytes through the heme oxygenase-1 pathway. Purinergic Signal. 11, 571-580 (2015).
-
(2015)
Purinergic Signal.
, vol.11
, pp. 571-580
-
-
Bellaver, B.1
-
32
-
-
34547531757
-
Pseudomonas aeruginosa lipopolysaccharide: A major virulence factor, initiator of inflammation and target for effective immunity
-
Pier, G. B. Pseudomonas aeruginosa lipopolysaccharide: a major virulence factor, initiator of inflammation and target for effective immunity. Int. J. Med. Microbiol. 297, 277-295 (2007).
-
(2007)
Int. J. Med. Microbiol.
, vol.297
, pp. 277-295
-
-
Pier, G.B.1
-
33
-
-
78449263449
-
Lipopolysaccharide as an antigen target for the formulation of a universal vaccine against Escherichia coli O111 strains
-
Santos, M. F. et al. Lipopolysaccharide as an antigen target for the formulation of a universal vaccine against Escherichia coli O111 strains. Clin. Vaccine Immunol. 17, 1772-1780 (2010).
-
(2010)
Clin. Vaccine Immunol.
, vol.17
, pp. 1772-1780
-
-
Santos, M.F.1
-
34
-
-
77956629628
-
The variation of O antigens in Gramnegative bacteria
-
Wang, L., Wang, Q. &Reeves, P. R. The variation of O antigens in Gramnegative bacteria. Subcell. Biochem. 53, 123-152 (2010).
-
(2010)
Subcell. Biochem.
, vol.53
, pp. 123-152
-
-
Wang, L.1
Wang, Q.2
Reeves, P.R.3
-
35
-
-
85016195075
-
Salmonella enterica Serovar Typhi lipopolysaccharide O-antigen modification impact on serum resistance and antibody recognition
-
Kintz, E. et al. Salmonella enterica Serovar Typhi lipopolysaccharide O-antigen modification impact on serum resistance and antibody recognition. Infect. Immun. 85, e01021-16 (2017).
-
(2017)
Infect. Immun.
, vol.85
, pp. e01021-e01116
-
-
Kintz, E.1
-
36
-
-
84859139678
-
The Pseudomonas aeruginosa rmlBDAC operon, encoding dTDP-l-rhamnose biosynthetic enzymes, is regulated by the quorum-sensing transcriptional regulator RhlR and the alternative sigma factor δ S
-
Aguirre-Ramirez, M., Medina, G., Gonzalez-Valdez, A., Grosso-Becerra, V. &Soberon-Chavez, G. The Pseudomonas aeruginosa rmlBDAC operon, encoding dTDP-l-rhamnose biosynthetic enzymes, is regulated by the quorum-sensing transcriptional regulator RhlR and the alternative sigma factor δ S. Microbiology 158, 908-916 (2012).
-
(2012)
Microbiology
, vol.158
, pp. 908-916
-
-
Aguirre-Ramirez, M.1
Medina, G.2
Gonzalez-Valdez, A.3
Grosso-Becerra, V.4
Soberon-Chavez, G.5
-
37
-
-
0037016732
-
Escherichia coli produces phosphoantigens activating human γ δ T cells
-
Feurle, J. et al. Escherichia coli produces phosphoantigens activating human γ δ T cells. J. Biol. Chem. 277, 148-154 (2002).
-
(2002)
J. Biol. Chem.
, vol.277
, pp. 148-154
-
-
Feurle, J.1
-
38
-
-
84861303511
-
Nociceptive and pro-inflammatory effects of dimethylallyl pyrophosphate via TRPV4 activation
-
Bang, S., Yoo, S., Yang, T. J., Cho, H. &Hwang, S. W. Nociceptive and pro-inflammatory effects of dimethylallyl pyrophosphate via TRPV4 activation. Br. J. Pharmacol. 166, 1433-1443 (2012).
-
(2012)
Br. J. Pharmacol.
, vol.166
, pp. 1433-1443
-
-
Bang, S.1
Yoo, S.2
Yang, T.J.3
Cho, H.4
Hwang, S.W.5
-
39
-
-
84891789225
-
Interaction of microbes with mucus and mucins: Recent developments
-
Naughton, J., Duggan, G., Bourke, B. &Clyne, M. Interaction of microbes with mucus and mucins: recent developments. Gut Microbes 5, 48-52 (2014).
-
(2014)
Gut Microbes
, vol.5
, pp. 48-52
-
-
Naughton, J.1
Duggan, G.2
Bourke, B.3
Clyne, M.4
-
40
-
-
84860487998
-
Human gastric mucins differently regulate Helicobacter pylori proliferation, gene expression and interactions with host cells
-
Skoog, E. C. et al. Human gastric mucins differently regulate Helicobacter pylori proliferation, gene expression and interactions with host cells. PLoS ONE 7, e36378 (2012).
-
(2012)
PLoS ONE
, vol.7
, pp. e36378
-
-
Skoog, E.C.1
-
41
-
-
48949101533
-
Campylobacter jejuni response to human mucin MUC2: Modulation of colonization and pathogenicity determinants
-
Tu, Q. V., McGuckin, M. A. &Mendz, G. L. Campylobacter jejuni response to human mucin MUC2: modulation of colonization and pathogenicity determinants. J. Med. Microbiol. 57, 795-802 (2008).
-
(2008)
J. Med. Microbiol.
, vol.57
, pp. 795-802
-
-
Tu, Q.V.1
McGuckin, M.A.2
Mendz, G.L.3
-
42
-
-
84908306828
-
Correlation between intraluminal oxygen gradient and radial partitioning of intestinal microbiota
-
Albenberg, L. et al. Correlation between intraluminal oxygen gradient and radial partitioning of intestinal microbiota. Gastroenterology 147, 1055-1063 (2014).
-
(2014)
Gastroenterology
, vol.147
, pp. 1055-1063
-
-
Albenberg, L.1
-
43
-
-
84991740729
-
Cystic fibrosis-adapted Pseudomonas aeruginosa quorum sensing lasR mutants cause hyperinflammatory responses
-
LaFayette, S. L. et al. Cystic fibrosis-adapted Pseudomonas aeruginosa quorum sensing lasR mutants cause hyperinflammatory responses. Sci. Adv. 1, e1500199 (2015).
-
(2015)
Sci. Adv.
, vol.1
, pp. e1500199
-
-
LaFayette, S.L.1
-
44
-
-
84879616964
-
The bacterial quorum-sensing signal molecule N-3-oxo-dodecanoyl-l-homoserine lactone reciprocally modulates pro-and anti-inflammatory cytokines in activated macrophages
-
Glucksam-Galnoy, Y. et al. The bacterial quorum-sensing signal molecule N-3-oxo-dodecanoyl-l-homoserine lactone reciprocally modulates pro-and anti-inflammatory cytokines in activated macrophages. J. Immunol. 191, 337-344 (2013).
-
(2013)
J. Immunol.
, vol.191
, pp. 337-344
-
-
Glucksam-Galnoy, Y.1
-
45
-
-
33644868418
-
Characterization of the Staphylococcus epidermidis accessorygene regulator response: Quorum-sensing regulation of resistance to human innate host defense
-
Yao, Y. et al. Characterization of the Staphylococcus epidermidis accessorygene regulator response: quorum-sensing regulation of resistance to human innate host defense. J. Infect. Dis. 193, 841-848 (2006).
-
(2006)
J. Infect. Dis.
, vol.193
, pp. 841-848
-
-
Yao, Y.1
-
46
-
-
84925600482
-
Manipulation of the quorum sensing signal AI-2 affects the antibiotic-treated gut microbiota
-
Thompson, J. A., Oliveira, R. A., Djukovic, A., Ubeda, C. &Xavier, K. B. Manipulation of the quorum sensing signal AI-2 affects the antibiotic-treated gut microbiota. Cell Rep. 10, 1861-1871 (2015).
-
(2015)
Cell Rep.
, vol.10
, pp. 1861-1871
-
-
Thompson, J.A.1
Oliveira, R.A.2
Djukovic, A.3
Ubeda, C.4
Xavier, K.B.5
-
47
-
-
84901847186
-
Relating the metatranscriptome and metagenome of the human gut
-
Franzosa, E. A. et al. Relating the metatranscriptome and metagenome of the human gut. Proc. Natl Acad. Sci. USA 111, E2329-E2338 (2014).
-
(2014)
Proc. Natl Acad. Sci. USA
, vol.111
, pp. E2329-E2338
-
-
Franzosa, E.A.1
-
48
-
-
0019319257
-
A simple index of Crohn's-disease activity
-
Harvey, R. F. &Bradshaw, J. M. A simple index of Crohn's-disease activity. Lancet 1, 514 (1980).
-
(1980)
Lancet
, vol.1
, pp. 514
-
-
Harvey, R.F.1
Bradshaw, J.M.2
-
49
-
-
0031812412
-
A simple clinical colitis activity index
-
Walmsley, R. S., Ayres, R. C., Pounder, R. E. &Allan, R. N. A simple clinical colitis activity index. Gut 43, 29-32 (1998).
-
(1998)
Gut
, vol.43
, pp. 29-32
-
-
Walmsley, R.S.1
Ayres, R.C.2
Pounder, R.E.3
Allan, R.N.4
-
50
-
-
84905049901
-
Trimmomatic: A flexible trimmer for Illumina sequence data
-
Bolger, A. M., Lohse, M. &Usadel, B. Trimmomatic: a flexible trimmer for Illumina sequence data. Bioinformatics 30, 2114-2120 (2014).
-
(2014)
Bioinformatics
, vol.30
, pp. 2114-2120
-
-
Bolger, A.M.1
Lohse, M.2
Usadel, B.3
-
51
-
-
84862286169
-
A framework for human microbiome research
-
Human Microbiome Project Consortium.
-
Human Microbiome Project Consortium. A framework for human microbiome research. Nature 486, 215-221 (2012).
-
(2012)
Nature
, vol.486
, pp. 215-221
-
-
-
52
-
-
84873739311
-
The SILVA ribosomal RNA gene database project: Improved data processing and web-based tools
-
Quast, C. et al. The SILVA ribosomal RNA gene database project: improved data processing and web-based tools. Nucleic Acids Res. 41, D590-D596 (2013).
-
(2013)
Nucleic Acids Res.
, vol.41
, pp. D590-D596
-
-
Quast, C.1
-
53
-
-
84964994621
-
MetaPhlAn2 for enhanced metagenomic taxonomic profiling
-
Truong, D. T. et al. MetaPhlAn2 for enhanced metagenomic taxonomic profiling. Nat. Methods 12, 902-903 (2015).
-
(2015)
Nat. Methods
, vol.12
, pp. 902-903
-
-
Truong, D.T.1
-
54
-
-
84859210032
-
Fast gapped-read alignment with Bowtie 2
-
Langmead, B. &Salzberg, S. L. Fast gapped-read alignment with Bowtie 2. Nat. Methods 9, 357-359 (2012).
-
(2012)
Nat. Methods
, vol.9
, pp. 357-359
-
-
Langmead, B.1
Salzberg, S.L.2
-
55
-
-
84925021592
-
Fast and sensitive protein alignment using DIAMOND
-
Buchfink, B., Xie, C. &Huson, D. H. Fast and sensitive protein alignment using DIAMOND. Nat. Methods 12, 59-60 (2015).
-
(2015)
Nat. Methods
, vol.12
, pp. 59-60
-
-
Buchfink, B.1
Xie, C.2
Huson, D.H.3
-
56
-
-
34347388470
-
UniRef: Comprehensive and non-redundant UniProt reference clusters
-
Suzek, B. E., Huang, H., McGarvey, P., Mazumder, R. &Wu, C. H. UniRef: comprehensive and non-redundant UniProt reference clusters. Bioinformatics 23, 1282-1288 (2007).
-
(2007)
Bioinformatics
, vol.23
, pp. 1282-1288
-
-
Suzek, B.E.1
Huang, H.2
McGarvey, P.3
Mazumder, R.4
Wu, C.H.5
-
57
-
-
84860490976
-
The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of pathway/genome databases
-
Caspi, R. et al. The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of pathway/genome databases. Nucleic Acids Res. 40, D742-D753 (2012).
-
(2012)
Nucleic Acids Res.
, vol.40
, pp. D742-D753
-
-
Caspi, R.1
-
58
-
-
70049085269
-
A parsimony approach to biological pathway reconstruction/inference for genomes and metagenomes
-
Ye, Y. &Doak, T. G. A parsimony approach to biological pathway reconstruction/inference for genomes and metagenomes. PLoS Comput. Biol. 5, e1000465 (2009).
-
(2009)
PLoS Comput. Biol.
, vol.5
, pp. e1000465
-
-
Ye, Y.1
Doak, T.G.2
|