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Volumn 9, Issue 12, 2017, Pages

Identification of alpha and beta coronavirus in wildlife species in france: bats, rodents, rabbits, and hedgehogs

Author keywords

Bats; Coronavirus; France; Genetic diversity; Hedgehogs; Rodents; Wild rabbits; Wildlife

Indexed keywords

ALPHACORONAVIRUS; ANIMAL EXPERIMENT; ARTICLE; BAT; BETACORONAVIRUS; CORONAVIRUS INFECTION; FECES ANALYSIS; FRANCE; GENETIC VARIABILITY; HEDGEHOG; LEPORIDAE; NONHUMAN; NUCLEOTIDE SEQUENCE; PHYLOGENETIC TREE; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; RNA EXTRACTION; RODENT; VIRUS IDENTIFICATION; WILDLIFE; ANIMAL; CLASSIFICATION; CORONAVIRINAE; DISEASE CARRIER; GENETIC VARIATION; GENETICS; GEOGRAPHY; ISOLATION AND PURIFICATION; PHYLOGENY; VETERINARY; VIROLOGY;

EID: 85037352590     PISSN: None     EISSN: 19994915     Source Type: Journal    
DOI: 10.3390/v9120364     Document Type: Article
Times cited : (122)

References (27)
  • 2
    • 84949496827 scopus 로고    scopus 로고
    • Alphacoronaviruses detected in french bats are phylogeographically linked to coronaviruses of european bats
    • Goffard, A.; Demanche, C.; Arthur, L.; Pinçon, C.; Michaux, J.; Dubuisson, J. Alphacoronaviruses detected in french bats are phylogeographically linked to coronaviruses of european bats. Viruses 2015, 7, 6279–6290.
    • (2015) Viruses , vol.7 , pp. 6279-6290
    • Goffard, A.1    Demanche, C.2    Arthur, L.3    Pinçon, C.4    Michaux, J.5    Dubuisson, J.6
  • 5
    • 84861313379 scopus 로고    scopus 로고
    • Isolation and characterization of a novel Betacoronavirus subgroup a coronavirus, rabbit coronavirus HKU14, from domestic rabbits
    • Lau, S.K.P.; Woo, P.C.Y.; Yip, C.C.Y.; Fan, R.Y.Y.; Huang, Y.; Wang, M.; Guo, R.; Lam, C.S.F.; Tsang, A.K.L.; Lai, K.K.Y.; et al. Isolation and characterization of a novel Betacoronavirus subgroup a coronavirus, rabbit coronavirus HKU14, from domestic rabbits. J. Virol. 2012, 86, 5481–5496.
    • (2012) J. Virol. , vol.86 , pp. 5481-5496
    • Lau, S.K.P.1    Woo, P.C.Y.2    Yip, C.C.Y.3    Fan, R.Y.Y.4    Huang, Y.5    Wang, M.6    Guo, R.7    Lam, C.S.F.8    Tsang, A.K.L.9    Lai, K.K.Y.10
  • 6
    • 84887338067 scopus 로고    scopus 로고
    • Detection of coronaviruses in bats of various species in Italy
    • Lelli, D.; Papetti, A.; Sabelli, C.; Moreno, A.; Boniotti, M.B. Detection of coronaviruses in bats of various species in Italy. Viruses 2013, 5, 2679–2689.
    • (2013) Viruses , vol.5 , pp. 2679-2689
    • Lelli, D.1    Papetti, A.2    Sabelli, C.3    Moreno, A.4    Boniotti, M.B.5
  • 8
    • 74549125386 scopus 로고    scopus 로고
    • SeaView version 4: A multiplatform graphical user interface for sequence alignment and phylogenetic tree building
    • Gouy, M.; Guindon, S.; Gascuel, O. SeaView version 4: A multiplatform graphical user interface for sequence alignment and phylogenetic tree building. Mol. Biol. Evol. 2010, 27, 221–224.
    • (2010) Mol. Biol. Evol. , vol.27 , pp. 221-224
    • Gouy, M.1    Guindon, S.2    Gascuel, O.3
  • 9
    • 77950806408 scopus 로고    scopus 로고
    • New algorithms and methods to estimate maximum-likelihood phylogenies: Assessing the performance of PhyML 3.0
    • Guindon, S.; Dufayard, J.F.; Lefort, V.; Anisimova, M.; Hordijk, W.; Gascuel, O. New algorithms and methods to estimate maximum-likelihood phylogenies: Assessing the performance of PhyML 3.0. Syst. Biol. 2010, 59, 307–321.
    • (2010) Syst. Biol. , vol.59 , pp. 307-321
    • Guindon, S.1    Dufayard, J.F.2    Lefort, V.3    Anisimova, M.4    Hordijk, W.5    Gascuel, O.6
  • 10
    • 85022158148 scopus 로고    scopus 로고
    • MEGA7: Molecular evolutionary genetics analysis version 7.0 for bigger datasets
    • Kumar, S.; Stecher, G.; Tamura, K. MEGA7: Molecular evolutionary genetics analysis version 7.0 for bigger datasets. Mol. Biol. Evol. 2016, 33, 1870–1874.
    • (2016) Mol. Biol. Evol. , vol.33 , pp. 1870-1874
    • Kumar, S.1    Stecher, G.2    Tamura, K.3
  • 11
    • 0000460102 scopus 로고    scopus 로고
    • Interval estimation for a binomial proportion
    • Brown, L.D.; Cai, T.T.; DasGupta, A. Interval estimation for a binomial proportion. Stat. Sci. 2001, 16, 101–133.
    • (2001) Stat. Sci. , vol.16 , pp. 101-133
    • Brown, L.D.1    Cai, T.T.2    Dasgupta, A.3
  • 13
  • 14
    • 85028622485 scopus 로고    scopus 로고
    • Novel Alphacoronaviruses and Paramyxoviruses co-circulate with Type 1 and SARS-related Betacoronaviruses in synanthropic bats in Luxembourg
    • Pauly, M.; Pir, J.B.; Loesch, C.; Sausy, A.; Snoeck, C.J.; Hubschen, J.M.; Muller, C.P. Novel Alphacoronaviruses and Paramyxoviruses co-circulate with Type 1 and SARS-related Betacoronaviruses in synanthropic bats in Luxembourg. Appl. Environ. Microbial. 2017, 83.
    • (2017) Appl. Environ. Microbial.
    • Pauly, M.1    Pir, J.B.2    Loesch, C.3    Sausy, A.4    Snoeck, C.J.5    Hubschen, J.M.6    Muller, C.P.7
  • 15
    • 77957950482 scopus 로고    scopus 로고
    • Genomic characterization of severe acute respiratory syndrome-related coronavirus in European bats and classification of coronaviruses based on partial RNA-dependent RNA polymerase gene sequences
    • Drexler, J.F.; Gloza-Rausch, F.; Glende, J.; Corman, V.M.; Muth, D.; Goettsche, M.; Seebens, A.; Niedrig, M.; Pfefferle, S.; Yordanov, S.; et al. Genomic characterization of severe acute respiratory syndrome-related coronavirus in European bats and classification of coronaviruses based on partial RNA-dependent RNA polymerase gene sequences. J. Virol. 2010, 84, 11336–11349.
    • (2010) J. Virol. , vol.84 , pp. 11336-11349
    • Drexler, J.F.1    Gloza-Rausch, F.2    Glende, J.3    Corman, V.M.4    Muth, D.5    Goettsche, M.6    Seebens, A.7    Niedrig, M.8    Pfefferle, S.9    Yordanov, S.10
  • 23
    • 13744252665 scopus 로고    scopus 로고
    • Complet genomic sequence of human coronavirus OC43: Molecular clock analysis suggests a relatively recent zoonotic coronavirus transmission event
    • Vijgen, L.; Keyaerts, E.; Moës, E.; Thoelen, I.; Wollants, E.; Lemey, P.; Vandamme, A.M.; Van Ranst, M. Complet genomic sequence of human coronavirus OC43: Molecular clock analysis suggests a relatively recent zoonotic coronavirus transmission event. J. Virol. 2005, 79, 1595–1604.
    • (2005) J. Virol. , vol.79 , pp. 1595-1604
    • Vijgen, L.1    Keyaerts, E.2    Moës, E.3    Thoelen, I.4    Wollants, E.5    Lemey, P.6    Vandamme, A.M.7    Van Ranst, M.8
  • 26
    • 0033982337 scopus 로고    scopus 로고
    • Retargeting of coronavirus by substitution of the spike glycoprotein ectodomain: Crossing the host cell species barrier
    • Kuo, L.; Godeke, G.J.; Raamsman, M.J.; Masters, P.S.; Rottier, P.J. Retargeting of coronavirus by substitution of the spike glycoprotein ectodomain: Crossing the host cell species barrier. J. Virol. 2000, 74, 1393–1406.
    • (2000) J. Virol. , vol.74 , pp. 1393-1406
    • Kuo, L.1    Godeke, G.J.2    Raamsman, M.J.3    Masters, P.S.4    Rottier, P.J.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.