메뉴 건너뛰기




Volumn 67, Issue 9, 2017, Pages 3398-3402

Vagococcus martis sp. Nov., isolated from the small intestine of a marten, martes flavigula

Author keywords

Firmicutes; Gut microbiota; Martes flavigula; Vagococcus

Indexed keywords

BACTERIAL DNA; CATALASE; FATTY ACID; MENAQUINONE; NUCLEOTIDE; PEPTIDOGLYCAN; QUINONE DERIVATIVE; RNA 16S; FARNOQUINONE; VITAMIN MK 7;

EID: 85029575102     PISSN: 14665026     EISSN: None     Source Type: Journal    
DOI: 10.1099/ijsem.0.002131     Document Type: Article
Times cited : (27)

References (29)
  • 2
    • 84977622019 scopus 로고    scopus 로고
    • Diet-microbiota interactions as moderators of human metabolism
    • Sonnenburg JL, Bäckhed F. Diet-microbiota interactions as moderators of human metabolism. Nature 2016;535:56-64.
    • (2016) Nature , vol.535 , pp. 56-64
    • Sonnenburg, J.L.1    Bäckhed, F.2
  • 4
    • 84978431877 scopus 로고    scopus 로고
    • The microbiota in adaptive immune homeostasis and disease
    • Honda K, Littman DR. The microbiota in adaptive immune homeostasis and disease. Nature 2016;535:75-84.
    • (2016) Nature , vol.535 , pp. 75-84
    • Honda, K.1    Littman, D.R.2
  • 5
    • 84977620054 scopus 로고    scopus 로고
    • Interactions between the microbiota and pathogenic bacteria in the gut
    • Bäumler AJ, Sperandio V. Interactions between the microbiota and pathogenic bacteria in the gut. Nature 2016;535:85-93.
    • (2016) Nature , vol.535 , pp. 85-93
    • Bäumler, A.J.1    Sperandio, V.2
  • 6
    • 84978134353 scopus 로고    scopus 로고
    • Microbiome-wide association studies link dynamic microbial consortia to disease
    • Gilbert JA, Quinn RA, Debelius J, Xu ZZ, Morton J et al. Microbiome-wide association studies link dynamic microbial consortia to disease. Nature 2016;535:94-103.
    • (2016) Nature , vol.535 , pp. 94-103
    • Gilbert, J.A.1    Quinn, R.A.2    Debelius, J.3    Xu, Z.Z.4    Morton, J.5
  • 7
    • 84856065705 scopus 로고    scopus 로고
    • Notes on diet, habituation and sociality of Yellow-throated Marten Martes flavigula
    • Parr J, Duckworth J. Notes on diet, habituation and sociality of Yellow-throated Marten Martes flavigula. Small Carniv Conserv 2007;36:27-29.
    • (2007) Small Carniv Conserv , vol.36 , pp. 27-29
    • Parr, J.1    Duckworth, J.2
  • 9
    • 84863230041 scopus 로고    scopus 로고
    • Introducing EzTaxon-e: A prokaryotic 16S rRNA gene sequence database with phylotypes that represent uncultured species
    • Kim OS, Cho YJ, Lee K, Yoon SH, Kim M et al. Introducing EzTaxon-e: a prokaryotic 16S rRNA gene sequence database with phylotypes that represent uncultured species. Int J Syst Evol Microbiol 2012;62:716-721.
    • (2012) Int J Syst Evol Microbiol , vol.62 , pp. 716-721
    • Kim, O.S.1    Cho, Y.J.2    Lee, K.3    Yoon, S.H.4    Kim, M.5
  • 10
    • 0031574072 scopus 로고    scopus 로고
    • The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools
    • Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG. The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 1997;25:4876-4882.
    • (1997) Nucleic Acids Res , vol.25 , pp. 4876-4882
    • Thompson, J.D.1    Gibson, T.J.2    Plewniak, F.3    Jeanmougin, F.4    Higgins, D.G.5
  • 11
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • Saitou N, Nei M. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 1987;4:406-425.
    • (1987) Mol Biol Evol , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 12
    • 0019797407 scopus 로고
    • Evolutionary trees from DNA sequences: A maximum likelihood approach
    • Felsenstein J. Evolutionary trees from DNA sequences: a maximum likelihood approach. J Mol Evol 1981;17:368-376.
    • (1981) J Mol Evol , vol.17 , pp. 368-376
    • Felsenstein, J.1
  • 13
    • 84963036271 scopus 로고
    • Quantitative phyletics and the evolution of anurans
    • Kluge AG, Farris JS. Quantitative phyletics and the evolution of anurans. Syst Zool 1969;18:1-32.
    • (1969) Syst Zool , vol.18 , pp. 1-32
    • Kluge, A.G.1    Farris, J.S.2
  • 14
    • 79957613599 scopus 로고    scopus 로고
    • MEGA5: Molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods
    • Tamura K, Peterson D, Peterson N, Stecher G, Nei M et al. MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol 2011;28:2731-2739.
    • (2011) Mol Biol Evol , vol.28 , pp. 2731-2739
    • Tamura, K.1    Peterson, D.2    Peterson, N.3    Stecher, G.4    Nei, M.5
  • 15
    • 84921670826 scopus 로고    scopus 로고
    • Actibacter haliotis sp. Nov., isolated from the gut of an abalone, Haliotis discus hannai, and emended description of the genus Actibacter
    • Hyun DW, Kim JY, Kim MS, Shin NR, Kim HS et al. Actibacter haliotis sp. nov., isolated from the gut of an abalone, Haliotis discus hannai, and emended description of the genus Actibacter. Int J Syst Evol Microbiol 2015;65:49-55.
    • (2015) Int J Syst Evol Microbiol , vol.65 , pp. 49-55
    • Hyun, D.W.1    Kim, J.Y.2    Kim, M.S.3    Shin, N.R.4    Kim, H.S.5
  • 16
    • 6044265186 scopus 로고
    • The use of semi-solid agar for the detection of bacterial motility
    • Tittsler RP, Sandholzer LA. The use of semi-solid agar for the detection of bacterial motility. J Bacteriol 1936;31:575-580.
    • (1936) J Bacteriol , vol.31 , pp. 575-580
    • Tittsler, R.P.1    Sandholzer, L.A.2
  • 17
    • 0015462556 scopus 로고
    • Peptidoglycan types of bacterial cell walls and their taxonomic implications
    • Schleifer KH, Kandler O. Peptidoglycan types of bacterial cell walls and their taxonomic implications. Bacteriol Rev 1972;36:407.
    • (1972) Bacteriol Rev , vol.36 , pp. 407
    • Schleifer, K.H.1    Kandler, O.2
  • 18
    • 0000943532 scopus 로고
    • 5 Analysis of the chemical composition and primary structure of Murein
    • Schleifer KH. 5 Analysis of the chemical composition and primary structure of Murein. Method Microbiol 1985;18:123-156.
    • (1985) Method Microbiol , vol.18 , pp. 123-156
    • Schleifer, K.H.1
  • 19
    • 0011201685 scopus 로고
    • The chemical composition of the cell wall in some gram-positive bacteria and its possible value as a taxonomic character
    • Cummins CS, Harris H. The chemical composition of the cell wall in some gram-positive bacteria and its possible value as a taxonomic character. J Gen Microbiol 1956;14:583-600.
    • (1956) J Gen Microbiol , vol.14 , pp. 583-600
    • Cummins, C.S.1    Harris, H.2
  • 20
    • 33745166274 scopus 로고    scopus 로고
    • Practical thin layer chromatography techniques for diaminopimelic acid and whole cell sugar analyses in the classification of environmental actinomycetes
    • Schön R, Groth I. Practical thin layer chromatography techniques for diaminopimelic acid and whole cell sugar analyses in the classification of environmental actinomycetes. J Basic Microbiol 2006; 46:243-249.
    • (2006) J Basic Microbiol , vol.46 , pp. 243-249
    • Schön, R.1    Groth, I.2
  • 21
    • 85029593450 scopus 로고    scopus 로고
    • MIDI. Sherlock Microbial Identification System Operating Manual, Version 3.0, Newark, DE: MIDI, Inc
    • MIDI. Sherlock Microbial Identification System Operating Manual, Version 3.0. Newark, DE: MIDI, Inc; 1999.
    • (1999)
  • 23
    • 0019490792 scopus 로고
    • Distribution of isoprenoid quinone structural types in bacteria and their taxonomic implication
    • Collins MD, Jones D. Distribution of isoprenoid quinone structural types in bacteria and their taxonomic implication. Microbiol Rev 1981;45:316-354.
    • (1981) Microbiol Rev , vol.45 , pp. 316-354
    • Collins, M.D.1    Jones, D.2
  • 24
    • 0019860493 scopus 로고
    • A note on the separation of natural mixtures of bacterial ubiquinones using reverse-phase partition thin-layer chromatography and high performance liquid chromatography
    • Collins MD, Jones D. A note on the separation of natural mixtures of bacterial ubiquinones using reverse-phase partition thin-layer chromatography and high performance liquid chromatography. J Appl Bacteriol 1981;51:129-134.
    • (1981) J Appl Bacteriol , vol.51 , pp. 129-134
    • Collins, M.D.1    Jones, D.2
  • 25
    • 0027121460 scopus 로고
    • DNA extraction for 16S rRNA gene analysis to determine genetic diversity in deep sediment communities
    • Rochelle PA, Fry JC, Parkes RJ, Weightman AJ. DNA extraction for 16S rRNA gene analysis to determine genetic diversity in deep sediment communities. FEMS Microbiol Lett 1992;100:59-65.
    • (1992) FEMS Microbiol Lett , vol.100 , pp. 59-65
    • Rochelle, P.A.1    Fry, J.C.2    Parkes, R.J.3    Weightman, A.J.4
  • 26
    • 0036862191 scopus 로고    scopus 로고
    • A fluorimetric method for the estimation of G+C mol% content in microorganisms by thermal denaturation temperature
    • Gonzalez JM, Saiz-Jimenez C. A fluorimetric method for the estimation of G+C mol% content in microorganisms by thermal denaturation temperature. Environ Microbiol 2002;4:770-773.
    • (2002) Environ Microbiol , vol.4 , pp. 770-773
    • Gonzalez, J.M.1    Saiz-Jimenez, C.2
  • 27
    • 85013809817 scopus 로고    scopus 로고
    • Introducing EzBio-Cloud: A taxonomically united database of 16S rRNA gene sequences and whole-genome assemblies
    • Yoon SH, Ha SM, Kwon S, Lim J, Kim Y et al. Introducing EzBio-Cloud: a taxonomically united database of 16S rRNA gene sequences and whole-genome assemblies. Int J Syst Evol Microbiol 2017; 67:1613-1617.
    • (2017) Int J Syst Evol Microbiol , vol.67 , pp. 1613-1617
    • Yoon, S.H.1    Ha, S.M.2    Kwon, S.3    Lim, J.4    Kim, Y.5
  • 29
    • 84893511241 scopus 로고    scopus 로고
    • Towards a taxonomic coherence between average nucleotide identity and 16S rRNA gene sequence similarity for species demarcation of prokaryotes
    • Kim M, Oh HS, Park SC, Chun J. Towards a taxonomic coherence between average nucleotide identity and 16S rRNA gene sequence similarity for species demarcation of prokaryotes. Int J Syst Evol Microbiol 2014;64:346-351.
    • (2014) Int J Syst Evol Microbiol , vol.64 , pp. 346-351
    • Kim, M.1    Oh, H.S.2    Park, S.C.3    Chun, J.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.