-
1
-
-
78751695365
-
cAMP, c-di-GMP, c-di-AMP and now cGMP: bacteria use them all
-
Gomelsky M. 2011. cAMP, c-di-GMP, c-di-AMP and now cGMP: bacteria use them all! Mol Microbiol 79:562-565. https://doi.org/10.1111/j.1365-2958.2010.07514.x.
-
(2011)
Mol Microbiol
, vol.79
, pp. 562-565
-
-
Gomelsky, M.1
-
2
-
-
84870542263
-
Nucleotide, c-di-GMP, c-di-AMP, cGMP, cAMP, (p)ppGpp signaling in bacteria and implications in pathogenesis
-
Kalia D, Merey G, Nakayama S, Zheng Y, Zhou J, Luo Y, Guo M, Roembke BT, Sintim HO. 2013. Nucleotide, c-di-GMP, c-di-AMP, cGMP, cAMP, (p)ppGpp signaling in bacteria and implications in pathogenesis. Chem Soc Rev 42:305-341. https://doi.org/10.1039/C2CS35206K.
-
(2013)
Chem Soc Rev
, vol.42
, pp. 305-341
-
-
Kalia, D.1
Merey, G.2
Nakayama, S.3
Zheng, Y.4
Zhou, J.5
Luo, Y.6
Guo, M.7
Roembke, B.T.8
Sintim, H.O.9
-
3
-
-
0037186598
-
A blue-light-activated adenylyl cyclase mediates photoavoidance in Euglena gracilis
-
Iseki M, Matsunaga S, Murakami A, Ohno K, Shiga K, Yoshida K, Sugai M, Takahashi T, Hori T, Watanabe M. 2002. A blue-light-activated adenylyl cyclase mediates photoavoidance in Euglena gracilis. Nature 415: 1047-1051. https://doi.org/10.1038/4151047a.
-
(2002)
Nature
, vol.415
, pp. 1047-1051
-
-
Iseki, M.1
Matsunaga, S.2
Murakami, A.3
Ohno, K.4
Shiga, K.5
Yoshida, K.6
Sugai, M.7
Takahashi, T.8
Hori, T.9
Watanabe, M.10
-
4
-
-
78650647900
-
Natural and engineered photoactivated nucleotidyl cyclases for optogenetic applications
-
Ryu MH, Moskvin OV, Siltberg-Liberles J, Gomelsky M. 2010. Natural and engineered photoactivated nucleotidyl cyclases for optogenetic applications. J Biol Chem 285:41501-41508. https://doi.org/10.1074/jbc.M110.177600.
-
(2010)
J Biol Chem
, vol.285
, pp. 41501-41508
-
-
Ryu, M.H.1
Moskvin, O.V.2
Siltberg-Liberles, J.3
Gomelsky, M.4
-
5
-
-
78651396502
-
Light modulation of cellular cAMP by a small bacterial photoactivated adenylyl cyclase, bPAC, of the soil bacterium Beggiatoa
-
Stierl M, Stumpf P, Udwari D, Gueta R, Hagedorn R, Losi A, Gärtner W, Petereit L, Efetova M, Schwarzel M, Oertner TG, Nagel G, Hegemann P. 2011 Light modulation of cellular cAMP by a small bacterial photoactivated adenylyl cyclase, bPAC, of the soil bacterium Beggiatoa. J Biol Chem 286:1181-1188. https://doi.org/10.1074/jbc.M110.185496.
-
(2011)
J Biol Chem
, vol.286
, pp. 1181-1188
-
-
Stierl, M.1
Stumpf, P.2
Udwari, D.3
Gueta, R.4
Hagedorn, R.5
Losi, A.6
Gärtner, W.7
Petereit, L.8
Efetova, M.9
Schwarzel, M.10
Oertner, T.G.11
Nagel, G.12
Hegemann, P.13
-
6
-
-
84885579044
-
A LOV-domain-mediated blue-light-activated adenylate (adenylyl) cyclase from the cyanobacterium Microcoleus chthonoplastes PCC 7420
-
Raffelberg S, Wang L, Gao S, Losi A, Gärtner W, Nagel G. 2013. A LOV-domain-mediated blue-light-activated adenylate (adenylyl) cyclase from the cyanobacterium Microcoleus chthonoplastes PCC 7420. Biochem J 455:359-365. https://doi.org/10.1042/BJ20130637.
-
(2013)
Biochem J
, vol.455
, pp. 359-365
-
-
Raffelberg, S.1
Wang, L.2
Gao, S.3
Losi, A.4
Gärtner, W.5
Nagel, G.6
-
7
-
-
84902590147
-
Engineering of a red-light-activated human cAMP/cGMP-specific phosphodiesterase
-
Gasser C, Taiber S, Yeh CM, Wittig CH, Hegemann P, Ryu S, Wunder F, Moglich A. 2014. Engineering of a red-light-activated human cAMP/cGMP-specific phosphodiesterase. Proc Natl Acad Sci U S A 111: 8803-8808. https://doi.org/10.1073/pnas.1321600111.
-
(2014)
Proc Natl Acad Sci U S A
, vol.111
, pp. 8803-8808
-
-
Gasser, C.1
Taiber, S.2
Yeh, C.M.3
Wittig, C.H.4
Hegemann, P.5
Ryu, S.6
Wunder, F.7
Moglich, A.8
-
8
-
-
84941070059
-
Optogenetic manipulation of cGMP in cells and animals by the tightly light-regulated guanylyl-cyclase opsin CyclOp
-
Gao S, Nagpal J, Schneider MW, Kozjak-Pavlovic V, Nagel G, Gottschalk A 2015 Optogenetic manipulation of cGMP in cells and animals by the tightly light-regulated guanylyl-cyclase opsin CyclOp. Nat Commun 6:8046. https://doi.org/10.1038/ncomms9046.
-
(2015)
Nat Commun
, vol.6
, pp. 8046
-
-
Gao, S.1
Nagpal, J.2
Schneider, M.W.3
Kozjak-Pavlovic, V.4
Nagel, G.5
Gottschalk, A.6
-
9
-
-
33845918217
-
An unorthodox bacteriophytochrome from Rhodobacter sphaeroides involved in turnover of the second messenger c-di-GMP
-
Tarutina M, Ryjenkov DA, Gomelsky M. 2006. An unorthodox bacteriophytochrome from Rhodobacter sphaeroides involved in turnover of the second messenger c-di-GMP. J Biol Chem 281:34751-34758. https://doi.org/10.1074/jbc.M604819200.
-
(2006)
J Biol Chem
, vol.281
, pp. 34751-34758
-
-
Tarutina, M.1
Ryjenkov, D.A.2
Gomelsky, M.3
-
10
-
-
67649295467
-
Structure and mechanism of a bacterial light-regulated cyclic nucleotide phosphodiesterase
-
Barends TRM, Hartmann E, Griese J, Beitlich T, Kirienko NV, Ryjenkov DA, Reinstein J, Shoeman RL, Gomelsky M, Schlichting I. 2009. Structure and mechanism of a bacterial light-regulated cyclic nucleotide phosphodiesterase. Nature 459:1015-1018. https://doi.org/10.1038/nature07966.
-
(2009)
Nature
, vol.459
, pp. 1015-1018
-
-
Barends, T.R.M.1
Hartmann, E.2
Griese, J.3
Beitlich, T.4
Kirienko, N.V.5
Ryjenkov, D.A.6
Reinstein, J.7
Shoeman, R.L.8
Gomelsky, M.9
Schlichting, I.10
-
11
-
-
77951862766
-
A blue light-inducible phosphodiesterase activity in the cyanobacterium Synechococcus elongatus
-
Cao Z, Livoti E, Losi A, Gärtner W. 2010. A blue light-inducible phosphodiesterase activity in the cyanobacterium Synechococcus elongatus. Photochem Photobiol 86:606-611. https://doi.org/10.1111/j.1751-1097.2010.00724.x.
-
(2010)
Photochem Photobiol
, vol.86
, pp. 606-611
-
-
Cao, Z.1
Livoti, E.2
Losi, A.3
Gärtner, W.4
-
12
-
-
84863578309
-
Light-induced alteration of c-di-GMP level controls motility of Synechocystis s. PCC 6803
-
Savakis P, De Causmaecker S, Angerer V, Ruppert U, Anders K, Essen LO, Wilde A. 2012. Light-induced alteration of c-di-GMP level controls motility of Synechocystis sp. PCC 6803. Mol Microbiol 85:239-251. https://doi.org/10.1111/j.1365-2958.2012.08106.x.
-
(2012)
Mol Microbiol
, vol.85
, pp. 239-251
-
-
Savakis, P.1
De Causmaecker, S.2
Angerer, V.3
Ruppert, U.4
Anders, K.5
Essen, L.O.6
Wilde, A.7
-
13
-
-
84904314045
-
Synthetic second messenger module controlled by near-infrared window light
-
Ryu MH, Gomelsky M. 2014. Synthetic second messenger module controlled by near-infrared window light. ACS Synth Biol 3:802-810. https://doi.org/10.1021/sb400182x.
-
(2014)
ACS Synth Biol
, vol.3
, pp. 802-810
-
-
Ryu, M.H.1
Gomelsky, M.2
-
14
-
-
84906960109
-
Cyanobacteriochrome SesA is a diguanylate cyclase that induces cell aggregation in Thermosynechococcus
-
Enomoto G, Nomura R, Shimada T, Ni-Ni-Win, Narikawa R, Ikeuchi M. 2014 Cyanobacteriochrome SesA is a diguanylate cyclase that induces cell aggregation in Thermosynechococcus. J Biol Chem 289:24801-24809. https://doi.org/10.1074/jbc.M114.583674.
-
(2014)
J Biol Chem
, vol.289
, pp. 24801-24809
-
-
Enomoto, G.1
Nomura, R.2
Shimada, T.3
Ni-Ni-Win, R.4
Narikawa, R.5
Ikeuchi, M.6
-
15
-
-
84937912938
-
Three cyanobacteriochromes work together to form a light color-sensitive input system for c-di-GMP signaling of cell aggregation
-
Enomoto G, Ni-Ni-Win, Narikawa R, Ikeuchi M. 2015. Three cyanobacteriochromes work together to form a light color-sensitive input system for c-di-GMP signaling of cell aggregation. Proc Natl Acad Sci U S A 112:8082-8087. https://doi.org/10.1073/pnas.1504228112.
-
(2015)
Proc Natl Acad Sci U S A
, vol.112
, pp. 8082-8087
-
-
Enomoto, G.1
Ni-Ni-Win, R.2
Narikawa, R.3
Ikeuchi, M.4
-
16
-
-
28544442417
-
Synthetic biology: engineering Escherichia coli to see light
-
Levskaya A, Chevalier AA, Tabor JJ, Simpson ZB, Lavery LA, Levy M, Davidson EA, Scouras A, Ellington AD, Marcotte EM, Voigt CA. 2005. Synthetic biology: engineering Escherichia coli to see light. Nature 438: 441-442. https://doi.org/10.1038/nature04405.
-
(2005)
Nature
, vol.438
, pp. 441-442
-
-
Levskaya, A.1
Chevalier, A.A.2
Tabor, J.J.3
Simpson, Z.B.4
Lavery, L.A.5
Levy, M.6
Davidson, E.A.7
Scouras, A.8
Ellington, A.D.9
Marcotte, E.M.10
Voigt, C.A.11
-
17
-
-
84922461814
-
How to train your microbe: methods for dynamically characterizing gene networks
-
Castillo-Hair SM, Igoshin OA, Tabor JJ. 2015. How to train your microbe: methods for dynamically characterizing gene networks. Curr Opin Microbiol 24:113-123. https://doi.org/10.1016/j.mib.2015.01.008.
-
(2015)
Curr Opin Microbiol
, vol.24
, pp. 113-123
-
-
Castillo-Hair, S.M.1
Igoshin, O.A.2
Tabor, J.J.3
-
18
-
-
14244254898
-
Cyclic diguanylate is a ubiquitous signaling molecule in bacteria: insights into the biochemistry of the GGDEF protein domain
-
Ryjenkov DA, Tarutina M, Moskvin OV, Gomelsky M. 2005. Cyclic diguanylate is a ubiquitous signaling molecule in bacteria: insights into the biochemistry of the GGDEF protein domain. J Bacteriol 187:1792-1798. https://doi.org/10.1128/JB.187.5.1792-1798.2005.
-
(2005)
J Bacteriol
, vol.187
, pp. 1792-1798
-
-
Ryjenkov, D.A.1
Tarutina, M.2
Moskvin, O.V.3
Gomelsky, M.4
-
19
-
-
84874914744
-
Cyclic di-GMP: the first 25 years of a universal bacterial second messenger
-
Römling U, Galperin MY, Gomelsky M. 2013. Cyclic di-GMP: the first 25 years of a universal bacterial second messenger. Microbiol Mol Biol Rev 77:1-52. https://doi.org/10.1128/MMBR.00043-12.
-
(2013)
Microbiol Mol Biol Rev
, vol.77
, pp. 1-52
-
-
Römling, U.1
Galperin, M.Y.2
Gomelsky, M.3
-
20
-
-
84988838402
-
Old concepts, new molecules and current approaches applied to the bacterial nucleotide signalling field
-
Gründling A, Lee VT. 2016. Old concepts, new molecules and current approaches applied to the bacterial nucleotide signalling field. Philos Trans R Soc Lond B Biol Sci 371:20150503. https://doi.org/10.1098/rstb.2015.0503.
-
(2016)
Philos Trans R Soc Lond B Biol Sci
, vol.371
-
-
Gründling, A.1
Lee, V.T.2
-
21
-
-
33750044865
-
The PilZ domain is a receptor for the second messenger c-di-GMP: the PilZ domain protein YcgR controls motility in enterobacteria
-
Ryjenkov DA, Simm R, Römling U, Gomelsky M. 2006. The PilZ domain is a receptor for the second messenger c-di-GMP: the PilZ domain protein YcgR controls motility in enterobacteria. J Biol Chem 281:30310-30314. https://doi.org/10.1074/jbc.C600179200.
-
(2006)
J Biol Chem
, vol.281
, pp. 30310-30314
-
-
Ryjenkov, D.A.1
Simm, R.2
Römling, U.3
Gomelsky, M.4
-
22
-
-
77950928649
-
Second messenger-mediated adjustment of bacterial swimming velocity
-
Boehm A, Kaiser M, Li H, Spangler C, Kasper CA, Ackermann M, Kaever V, Sourjik V, Roth V, Jenal U. 2010. Second messenger-mediated adjustment of bacterial swimming velocity. Cell 141:107-116. https://doi.org/10.1016/j.cell.2010.01.018.
-
(2010)
Cell
, vol.141
, pp. 107-116
-
-
Boehm, A.1
Kaiser, M.2
Li, H.3
Spangler, C.4
Kasper, C.A.5
Ackermann, M.6
Kaever, V.7
Sourjik, V.8
Roth, V.9
Jenal, U.10
-
23
-
-
77950370030
-
The c-di-GMP binding protein YcgR controls flagellar motor direction and speed to affect chemotaxis by a "backstop brake" mechanism
-
Paul K, Nieto V, Carlquist WC, Blair DF, Harshey RM. 2010. The c-di-GMP binding protein YcgR controls flagellar motor direction and speed to affect chemotaxis by a "backstop brake" mechanism. Mol Cell 38: 128-139. https://doi.org/10.1016/j.molcel.2010.03.001.
-
(2010)
Mol Cell
, vol.38
, pp. 128-139
-
-
Paul, K.1
Nieto, V.2
Carlquist, W.C.3
Blair, D.F.4
Harshey, R.M.5
-
24
-
-
77952813357
-
A post-translational, c-di-GMP-dependent mechanism regulating bacterial flagellar motility
-
Fang X, Gomelsky M. 2010. A post-translational, c-di-GMP-dependent mechanism regulating bacterial flagellar motility. Mol Microbiol 76: 1295-1305. https://doi.org/10.1111/j.1365-2958.2010.07179.x.
-
(2010)
Mol Microbiol
, vol.76
, pp. 1295-1305
-
-
Fang, X.1
Gomelsky, M.2
-
25
-
-
0029561748
-
Expression of two csg operons is required for production of fibronectin-and Congo red-binding curli polymers in Escherichia coli K-12
-
Hammar M, Arnqvist A, Bian Z, Olsén A, Normark S. 1995. Expression of two csg operons is required for production of fibronectin-and Congo red-binding curli polymers in Escherichia coli K-12. Mol Microbiol 18: 661-670. https://doi.org/10.1111/j.1365-2958.1995.mmi_18040661.x.
-
(1995)
Mol Microbiol
, vol.18
, pp. 661-670
-
-
Hammar, M.1
Arnqvist, A.2
Bian, Z.3
Olsén, A.4
Normark, S.5
-
26
-
-
21144439731
-
Characterization of the rdar morphotype, a multicellular behaviour in Enterobacteriaceae
-
Römling U. 2005. Characterization of the rdar morphotype, a multicellular behaviour in Enterobacteriaceae. Cell Mol Life Sci 62:1234-1246. https://doi.org/10.1007/s00018-005-4557-x.
-
(2005)
Cell Mol Life Sci
, vol.62
, pp. 1234-1246
-
-
Römling, U.1
-
27
-
-
77953244382
-
Asymmetrical distribution of the second messenger c-di-GMP upon bacterial cell division
-
Christen M, Kulasekara HD, Christen B, Kulasekara BR, Hoffman LR, Miller SI. 2010. Asymmetrical distribution of the second messenger c-di-GMP upon bacterial cell division. Science 328:1295-1297. https://doi.org/10.1126/science.1188658.
-
(2010)
Science
, vol.328
, pp. 1295-1297
-
-
Christen, M.1
Kulasekara, H.D.2
Christen, B.3
Kulasekara, B.R.4
Hoffman, L.R.5
Miller, S.I.6
-
28
-
-
84890454030
-
c-di-GMP heterogeneity is generated by the chemotaxis machinery to regulate flagellar motility
-
Kulasekara BR, Kamischke C, Kulasekara HD, Christen M, Wiggins PA, Miller SI. 2013. c-di-GMP heterogeneity is generated by the chemotaxis machinery to regulate flagellar motility. eLife 2:e01402. https://doi.org/10.7554/eLife.01402.
-
(2013)
eLife
, vol.2
-
-
Kulasekara, B.R.1
Kamischke, C.2
Kulasekara, H.D.3
Christen, M.4
Wiggins, P.A.5
Miller, S.I.6
-
29
-
-
84937719576
-
Cyclic di-GMP acts as a cell cycle oscillator to drive chromosome replication
-
Lori C, Ozaki S, Steiner S, Böhm R, Abel S, Dubey BN, Schirmer T, Hiller S, Jenal U. 2015. Cyclic di-GMP acts as a cell cycle oscillator to drive chromosome replication. Nature 523:236-239. https://doi.org/10.1038/nature14473.
-
(2015)
Nature
, vol.523
, pp. 236-239
-
-
Lori, C.1
Ozaki, S.2
Steiner, S.3
Böhm, R.4
Abel, S.5
Dubey, B.N.6
Schirmer, T.7
Hiller, S.8
Jenal, U.9
-
30
-
-
84880068681
-
Integration of the second messenger c-di-GMP into the chemotactic signaling pathway promotes sensory adaptation
-
Russell MH, Bible AN, Fang X, Gooding J, Campagna S, Gomelsky M, Alexandre G. 2013. Integration of the second messenger c-di-GMP into the chemotactic signaling pathway promotes sensory adaptation. mBio 4:e00001-13. https://doi.org/10.1128/mBio.00001-13.
-
(2013)
mBio
, vol.4
-
-
Russell, M.H.1
Bible, A.N.2
Fang, X.3
Gooding, J.4
Campagna, S.5
Gomelsky, M.6
Alexandre, G.7
-
31
-
-
56949101785
-
Photodynamics of blue-light-regulated phosphodiesterase BlrP1 protein from Klebsiella pneumoniae and its photoreceptor BLUF domain
-
Tyagi A, Penzkofer A, Griese J, Schlichting I, Kirienko NV, Gomelsky M. 2008 Photodynamics of blue-light-regulated phosphodiesterase BlrP1 protein from Klebsiella pneumoniae and its photoreceptor BLUF domain. Chem Phys 354:130-141. https://doi.org/10.1016/j.chemphys.2008.10.003.
-
(2008)
Chem Phys
, vol.354
, pp. 130-141
-
-
Tyagi, A.1
Penzkofer, A.2
Griese, J.3
Schlichting, I.4
Kirienko, N.V.5
Gomelsky, M.6
-
32
-
-
0036804709
-
BLUF: a novel FAD-binding domain involved in sensory transduction in microorganisms
-
Gomelsky M, Klug G. 2002. BLUF: a novel FAD-binding domain involved in sensory transduction in microorganisms. Trends Biochem Sci 27: 497-500. https://doi.org/10.1016/S0968-0004(02)02181-3.
-
(2002)
Trends Biochem Sci
, vol.27
, pp. 497-500
-
-
Gomelsky, M.1
Klug, G.2
-
33
-
-
84923859835
-
From plant infectivity to growth patterns: the role of blue-light sensing in the prokaryotic world
-
Losi A, Mandalari C, Gärtner W. 2014. From plant infectivity to growth patterns: the role of blue-light sensing in the prokaryotic world. Plants (Basel) 3:70-94. https://doi.org/10.3390/plants3010070.
-
(2014)
Plants (Basel)
, vol.3
, pp. 70-94
-
-
Losi, A.1
Mandalari, C.2
Gärtner, W.3
-
34
-
-
84976865403
-
The Pfam protein families database: towards a more sustainable future
-
Finn D, Coggill P, Eberhardt RY, Eddy SR, Mistry J, Mitchell AL, Potter SC, Punta M, Qureshi M, Sangrador-Vegas A, Salazar GA, Tate J, Bateman A. 2016 The Pfam protein families database: towards a more sustainable future. Nucleic Acids Res 44:D279-D285. https://doi.org/10.1093/nar/gkv1344.
-
(2016)
Nucleic Acids Res
, vol.44
, pp. D279-D285
-
-
Finn, D.1
Coggill, P.2
Eberhardt, R.Y.3
Eddy, S.R.4
Mistry, J.5
Mitchell, A.L.6
Potter, S.C.7
Punta, M.8
Qureshi, M.9
Sangrador-Vegas, A.10
Salazar, G.A.11
Tate, J.12
Bateman, A.13
-
35
-
-
0037255597
-
Overview of tag protein fusions: from molecular and biochemical fundamentals to commercial systems
-
Terpe K. 2003. Overview of tag protein fusions: from molecular and biochemical fundamentals to commercial systems. Appl Microbiol Biotechnol 60:523-533. https://doi.org/10.1007/s00253-002-1158-6.
-
(2003)
Appl Microbiol Biotechnol
, vol.60
, pp. 523-533
-
-
Terpe, K.1
-
36
-
-
84953868404
-
Systematic nomenclature for GGDEF and EAL domain-containing c-di-GMP turnover proteins of Escherichia coli
-
Hengge R, Galperin MY, Ghigo JM, Gomelsky M, Green J, Hughes KT, Jenal U, Landini P. 2015. Systematic nomenclature for GGDEF and EAL domain-containing c-di-GMP turnover proteins of Escherichia coli. J Bacteriol 198:7-11. https://doi.org/10.1128/JB.00424-15.
-
(2015)
J Bacteriol
, vol.198
, pp. 7-11
-
-
Hengge, R.1
Galperin, M.Y.2
Ghigo, J.M.3
Gomelsky, M.4
Green, J.5
Hughes, K.T.6
Jenal, U.7
Landini, P.8
-
37
-
-
84860905515
-
Discrete cyclic di-GMP-dependent control of bacterial predation versus axenic growth in Bdellovibrio bacteriovorus
-
Hobley L, Fung RK, Lambert C, Harris MA, Dabhi JM, King SS, Lambert C, Uchida K, Basford S, Ahmad R, Aizawa SI, Gomelsky M, Sockett RE. 2012. Discrete cyclic di-GMP-dependent control of bacterial predation versus axenic growth in Bdellovibrio bacteriovorus. PLoS Pathog 8:e1002493. https://doi.org/10.1371/journal.ppat.1002493.
-
(2012)
PLoS Pathog
, vol.8
-
-
Hobley, L.1
Fung, R.K.2
Lambert, C.3
Harris, M.A.4
Dabhi, J.M.5
King, S.S.6
Lambert, C.7
Uchida, K.8
Basford, S.9
Ahmad, R.10
Aizawa, S.I.11
Gomelsky, M.12
Sockett, R.E.13
-
38
-
-
84866330705
-
Cyclic di-GMP phosphodiesterases RmdA and RmdB are involved in regulating colony morphology and development in Streptomyces coelicolor
-
Hull TD, Ryu MH, Sullivan MJ, Klena NT, Johnson RC, Geiger RM, Gomelsky M, Bennett JA. 2012. Cyclic di-GMP phosphodiesterases RmdA and RmdB are involved in regulating colony morphology and development in Streptomyces coelicolor. J Bacteriol 194:4642-4651. https://doi.org/10.1128/JB.00157-12.
-
(2012)
J Bacteriol
, vol.194
, pp. 4642-4651
-
-
Hull, T.D.1
Ryu, M.H.2
Sullivan, M.J.3
Klena, N.T.4
Johnson, R.C.5
Geiger, R.M.6
Gomelsky, M.7
Bennett, J.A.8
-
39
-
-
84920777348
-
Cyclic di-GMP-dependent signaling pathways in the pathogenic firmicute Listeria monocytogenes
-
Chen LH, Köseoğ lu VK, Güvener ZT, Myers-Morales T, Reed JM, D'Orazio SEF, Miller KW, Gomelsky M. 2014. Cyclic di-GMP-dependent signaling pathways in the pathogenic firmicute Listeria monocytogenes. PLoS Pathog 10:e1004301. https://doi.org/10.1371/journal.ppat.1004301.
-
(2014)
PLoS Pathog
, vol.10
-
-
Chen, L.H.1
Köseoğlu, V.K.2
Güvener, Z.T.3
Myers-Morales, T.4
Reed, J.M.5
D'Orazio, S.E.F.6
Miller, K.W.7
Gomelsky, M.8
-
40
-
-
84979854249
-
JPred4: a protein secondary structure prediction server
-
Drozdetskiy A, Cole C, Procter J, Barton GJ. 2015. JPred4: a protein secondary structure prediction server. Nucleic Acids Res 43:W389-W394. https://doi.org/10.1093/nar/gkv332.
-
(2015)
Nucleic Acids Res
, vol.43
, pp. W389-W394
-
-
Drozdetskiy, A.1
Cole, C.2
Procter, J.3
Barton, G.J.4
-
41
-
-
0942298565
-
Signal transduction by hemecontaining PAS-domain proteins
-
Gilles-Gonzalez MA, Gonzalez G. 2004. Signal transduction by hemecontaining PAS-domain proteins. J Appl Physiol 96:774-783. https://doi.org/10.1152/japplphysiol.00941.2003.
-
(2004)
J Appl Physiol
, vol.96
, pp. 774-783
-
-
Gilles-Gonzalez, M.A.1
Gonzalez, G.2
-
42
-
-
0032567446
-
AppA, a redox regulator of photosystem formation in Rhodobacter sphaeroides 2.4.1 is a flavoprotein: identification of a novel FAD binding domain
-
Gomelsky M, Kaplan S. 1998. AppA, a redox regulator of photosystem formation in Rhodobacter sphaeroides 2.4.1 is a flavoprotein: identification of a novel FAD binding domain. J Biol Chem 273:35319-35325. https://doi.org/10.1074/jbc.273.52.35319.
-
(1998)
J Biol Chem
, vol.273
, pp. 35319-35325
-
-
Gomelsky, M.1
Kaplan, S.2
-
43
-
-
0036371637
-
A single flavoprotein, AppA, from Rhodobacter sphaeroides integrates both redox and light signals
-
Braatsch S, Gomelsky M, Kuphal S, Klug G. 2002. A single flavoprotein, AppA, from Rhodobacter sphaeroides integrates both redox and light signals. Mol Microbiol 45:827-836. https://doi.org/10.1046/j.1365-2958.2002.03058.x.
-
(2002)
Mol Microbiol
, vol.45
, pp. 827-836
-
-
Braatsch, S.1
Gomelsky, M.2
Kuphal, S.3
Klug, G.4
-
44
-
-
0037031561
-
AppA is a blue light photoreceptor that antirepresses photosynthesis gene expression in Rhodobacter sphaeroides
-
Masuda S, Bauer CE. 2002. AppA is a blue light photoreceptor that antirepresses photosynthesis gene expression in Rhodobacter sphaeroides. Cell 110:613-623. https://doi.org/10.1016/S0092-8674(02)00876-0.
-
(2002)
Cell
, vol.110
, pp. 613-623
-
-
Masuda, S.1
Bauer, C.E.2
-
45
-
-
35348941113
-
Novel heme-based oxygen sensor with a revealing evolutionary history
-
Moskvin OV, Kaplan S, Gilles-Gonzalez MA, Gomelsky M. 2007. Novel heme-based oxygen sensor with a revealing evolutionary history. J Biol Chem 282:28740-28748. https://doi.org/10.1074/jbc.M703261200.
-
(2007)
J Biol Chem
, vol.282
, pp. 28740-28748
-
-
Moskvin, O.V.1
Kaplan, S.2
Gilles-Gonzalez, M.A.3
Gomelsky, M.4
-
46
-
-
84880165940
-
A ternary AppA-PpsR-DNA complex mediates light regulation of photosynthesis-related gene expression
-
Winkler A, Heintz U, Lindner R, Reinstein J, Shoeman RL, Schlichting I. 2013 A ternary AppA-PpsR-DNA complex mediates light regulation of photosynthesis-related gene expression. Nat Struct Mol Biol 20: 859-867. https://doi.org/10.1038/nsmb.2597.
-
(2013)
Nat Struct Mol Biol
, vol.20
, pp. 859-867
-
-
Winkler, A.1
Heintz, U.2
Lindner, R.3
Reinstein, J.4
Shoeman, R.L.5
Schlichting, I.6
-
47
-
-
84863127804
-
Complete genome sequence of Allochromatium vinosum DSM 180(T)
-
Weissgerber T, Zigann R, Bruce D, Chang YJ, Detter JC, Han C, Hauser L, Jeffries CD, Land M, Munk AC, Tapia R, Dahl C. 2011. Complete genome sequence of Allochromatium vinosum DSM 180(T). Stand Genomic Sci 5:311-330. https://doi.org/10.4056/sigs.2335270.
-
(2011)
Stand Genomic Sci
, vol.5
, pp. 311-330
-
-
Weissgerber, T.1
Zigann, R.2
Bruce, D.3
Chang, Y.J.4
Detter, J.C.5
Han, C.6
Hauser, L.7
Jeffries, C.D.8
Land, M.9
Munk, A.C.10
Tapia, R.11
Dahl, C.12
-
48
-
-
84884528592
-
Ecology, diversity, and evolution of magnetotactic bacteria
-
Lefèvre CT, Bazylinski DA. 2013. Ecology, diversity, and evolution of magnetotactic bacteria. Microbiol Mol Biol Rev 77:497-526. https://doi.org/10.1128/MMBR.00021-13.
-
(2013)
Microbiol Mol Biol Rev
, vol.77
, pp. 497-526
-
-
Lefèvre, C.T.1
Bazylinski, D.A.2
-
49
-
-
85027991914
-
Optogenetic manipulation of cyclic di-GMP (c-di-GMP) levels reveals the role of c-di-GMP in regulating aerotaxis receptor activity in Azospirillum brasilense
-
O'Neal LD, Ryu M-H, Gomelsky M, Alexandre G. 2017. Optogenetic manipulation of cyclic di-GMP (c-di-GMP) levels reveals the role of c-di-GMP in regulating aerotaxis receptor activity in Azospirillum brasilense. J Bacteriol 199:e00020-17. https://doi.org/10.1128/JB.00020-17.
-
(2017)
J Bacteriol
, vol.199
-
-
O'Neal, L.D.1
Ryu, M.-H.2
Gomelsky, M.3
Alexandre, G.4
-
50
-
-
85010677244
-
The antimicrobial effect of blue light: what are behind?
-
Dai T. 4 January 2017
-
Dai T. 4 January 2017. The antimicrobial effect of blue light: what are behind? Virulence https://doi.org/10.1080/21505594.2016.1276691.
-
Virulence
-
-
-
51
-
-
33745938554
-
Phytochrome structure and signaling mechanisms
-
Rockwell NC, Su YS, Lagarias JC. 2006. Phytochrome structure and signaling mechanisms. Annu Rev Plant Biol 57:837-858. https://doi.org/10.1146/annurev.arplant.56.032604.144208.
-
(2006)
Annu Rev Plant Biol
, vol.57
, pp. 837-858
-
-
Rockwell, N.C.1
Su, Y.S.2
Lagarias, J.C.3
-
52
-
-
85027964885
-
Using lightactivated enzymes for modulating intracellular c-di-GMP levels in bacteria
-
Sauer K (ed), in press. Humana Press, New York, NY
-
Ryu MH, Fomicheva F, O'Neal L, Alexandre G, Gomelsky M. Using lightactivated enzymes for modulating intracellular c-di-GMP levels in bacteria. In Sauer K (ed), c-di-GMP signaling, in press. Humana Press, New York, NY.
-
c-di-GMP signaling
-
-
Ryu, M.H.1
Fomicheva, F.2
O'Neal, L.3
Alexandre, G.4
Gomelsky, M.5
-
53
-
-
67349270900
-
Enzymatic assembly of DNA molecules up to several hundred kilobases
-
Gibson DG, Young L, Chuang RY, Venter JC, Hutchison CA, III, Smith HO. 2009 Enzymatic assembly of DNA molecules up to several hundred kilobases. Nat Methods 6:343-345. https://doi.org/10.1038/nmeth.1318.
-
(2009)
Nat Methods
, vol.6
, pp. 343-345
-
-
Gibson, D.G.1
Young, L.2
Chuang, R.Y.3
Venter, J.C.4
Hutchison, C.A.5
Smith, H.O.6
-
54
-
-
21844451590
-
The ubiquitous protein domain EAL is a c-di-GMP-specific phosphodiesterase: enzymatically active and inactive EAL domains
-
Schmidt AJ, Ryjenkov DA, Gomelsky M. 2005. The ubiquitous protein domain EAL is a c-di-GMP-specific phosphodiesterase: enzymatically active and inactive EAL domains. J Bacteriol 187:4774-4781. https://doi.org/10.1128/JB.187.14.4774-4781.2005.
-
(2005)
J Bacteriol
, vol.187
, pp. 4774-4781
-
-
Schmidt, A.J.1
Ryjenkov, D.A.2
Gomelsky, M.3
|