-
1
-
-
45549097452
-
Positive feedback in cellular control systems
-
10.1002/bies.20769, 2486260, 18478531
-
Mitrophanov AY, Groisman EA. Positive feedback in cellular control systems. Bioessays 2008, 30:542-555. 10.1002/bies.20769, 2486260, 18478531.
-
(2008)
Bioessays
, vol.30
, pp. 542-555
-
-
Mitrophanov, A.Y.1
Groisman, E.A.2
-
2
-
-
60749120831
-
Calling heads from tails: the role of mathematical modeling in understanding cell polarization
-
10.1016/j.ceb.2009.01.001, 2692189, 19167872
-
Onsum MD, Rao CV. Calling heads from tails: the role of mathematical modeling in understanding cell polarization. Curr Opin Cell Biol 2009, 21:74-81. 10.1016/j.ceb.2009.01.001, 2692189, 19167872.
-
(2009)
Curr Opin Cell Biol
, vol.21
, pp. 74-81
-
-
Onsum, M.D.1
Rao, C.V.2
-
3
-
-
56749160113
-
Design principles of biochemical oscillators
-
10.1038/nrm2530, 2796343, 18971947
-
Novak B, Tyson JJ. Design principles of biochemical oscillators. Nat Rev Mol Cell Biol 2008, 9:981-991. 10.1038/nrm2530, 2796343, 18971947.
-
(2008)
Nat Rev Mol Cell Biol
, vol.9
, pp. 981-991
-
-
Novak, B.1
Tyson, J.J.2
-
4
-
-
17144456808
-
Positive feedback in eukaryotic gene networks: cell differentiation by graded to binary response conversion
-
10.1093/emboj/20.10.2528, 125456, 11350942
-
Becskei A, Seraphin B, Serrano L. Positive feedback in eukaryotic gene networks: cell differentiation by graded to binary response conversion. Embo J 2001, 20:2528-2535. 10.1093/emboj/20.10.2528, 125456, 11350942.
-
(2001)
Embo J
, vol.20
, pp. 2528-2535
-
-
Becskei, A.1
Seraphin, B.2
Serrano, L.3
-
5
-
-
22144452865
-
Hysteresis in a synthetic mammalian gene network
-
10.1073/pnas.0500345102, 1172236, 15972812
-
Kramer BP, Fussenegger M. Hysteresis in a synthetic mammalian gene network. Proc Natl Acad Sci USA 2005, 102:9517-9522. 10.1073/pnas.0500345102, 1172236, 15972812.
-
(2005)
Proc Natl Acad Sci USA
, vol.102
, pp. 9517-9522
-
-
Kramer, B.P.1
Fussenegger, M.2
-
6
-
-
33744794380
-
Regulatory dynamics of synthetic gene networks with positive feedback
-
10.1016/j.jmb.2006.03.064, 16701695
-
Maeda YT, Sano M. Regulatory dynamics of synthetic gene networks with positive feedback. J Mol Biol 2006, 359:1107-1124. 10.1016/j.jmb.2006.03.064, 16701695.
-
(2006)
J Mol Biol
, vol.359
, pp. 1107-1124
-
-
Maeda, Y.T.1
Sano, M.2
-
7
-
-
34548856538
-
Rational design of memory in eukaryotic cells
-
10.1101/gad.1586107, 1973140, 17875664
-
Ajo-Franklin CM, Drubin DA, Eskin JA, Gee EP, Landgraf D, Phillips I, Silver PA. Rational design of memory in eukaryotic cells. Genes Dev 2007, 21:2271-2276. 10.1101/gad.1586107, 1973140, 17875664.
-
(2007)
Genes Dev
, vol.21
, pp. 2271-2276
-
-
Ajo-Franklin, C.M.1
Drubin, D.A.2
Eskin, J.A.3
Gee, E.P.4
Landgraf, D.5
Phillips, I.6
Silver, P.A.7
-
8
-
-
57049159362
-
A fast, robust and tunable synthetic gene oscillator
-
10.1038/nature07389, 18971928
-
Stricker J, Cookson S, Bennett MR, Mather WH, Tsimring LS, Hasty J. A fast, robust and tunable synthetic gene oscillator. Nature 2008, 456:516-519. 10.1038/nature07389, 18971928.
-
(2008)
Nature
, vol.456
, pp. 516-519
-
-
Stricker, J.1
Cookson, S.2
Bennett, M.R.3
Mather, W.H.4
Tsimring, L.S.5
Hasty, J.6
-
9
-
-
34848885875
-
Construction and engineering of positive feedback loops
-
10.1021/cb6004245, 17184133
-
Sayut DJ, Niu Y, Sun L. Construction and engineering of positive feedback loops. ACS Chem Biol 2006, 1:692-696. 10.1021/cb6004245, 17184133.
-
(2006)
ACS Chem Biol
, vol.1
, pp. 692-696
-
-
Sayut, D.J.1
Niu, Y.2
Sun, L.3
-
10
-
-
34848923335
-
Noise and kinetics of LuxR positive feedback loops
-
10.1016/j.bbrc.2007.09.057, 17905197
-
Sayut DJ, Kambam PK, Sun L. Noise and kinetics of LuxR positive feedback loops. Biochem Biophys Res Commun 2007, 363:667-673. 10.1016/j.bbrc.2007.09.057, 17905197.
-
(2007)
Biochem Biophys Res Commun
, vol.363
, pp. 667-673
-
-
Sayut, D.J.1
Kambam, P.K.2
Sun, L.3
-
11
-
-
0036731699
-
Listening in on bacteria: acyl-homoserine lactone signalling
-
10.1038/nrm907, 12209128
-
Fuqua C, Greenberg EP. Listening in on bacteria: acyl-homoserine lactone signalling. Nat Rev Mol Cell Biol 2002, 3:685-695. 10.1038/nrm907, 12209128.
-
(2002)
Nat Rev Mol Cell Biol
, vol.3
, pp. 685-695
-
-
Fuqua, C.1
Greenberg, E.P.2
-
12
-
-
0034612342
-
One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products
-
10.1073/pnas.120163297, 18686, 10829079
-
Datsenko KA, Wanner BL. One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products. Proc Natl Acad Sci USA 2000, 97:6640-6645. 10.1073/pnas.120163297, 18686, 10829079.
-
(2000)
Proc Natl Acad Sci USA
, vol.97
, pp. 6640-6645
-
-
Datsenko, K.A.1
Wanner, B.L.2
-
13
-
-
0030861452
-
Independent and tight regulation of transcriptional units in Escherichia coli via the LacR/O, the TetR/O and AraC/I1-I2 regulatory elements
-
10.1093/nar/25.6.1203, 146584, 9092630
-
Lutz R, Bujard H. Independent and tight regulation of transcriptional units in Escherichia coli via the LacR/O, the TetR/O and AraC/I1-I2 regulatory elements. Nucleic Acids Res 1997, 25:1203-1210. 10.1093/nar/25.6.1203, 146584, 9092630.
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 1203-1210
-
-
Lutz, R.1
Bujard, H.2
-
14
-
-
1942467023
-
Programmed population control by cell-cell communication and regulated killing
-
10.1038/nature02491, 15064770
-
You L, Cox RS, Weiss R, Arnold FH. Programmed population control by cell-cell communication and regulated killing. Nature 2004, 428:868-871. 10.1038/nature02491, 15064770.
-
(2004)
Nature
, vol.428
, pp. 868-871
-
-
You, L.1
Cox, R.S.2
Weiss, R.3
Arnold, F.H.4
-
15
-
-
0033735452
-
Improved gfp and inaZ broad-host-range promoter-probe vectors
-
10.1094/MPMI.2000.13.11.1243, 11059491
-
Miller WG, Leveau JH, Lindow SE. Improved gfp and inaZ broad-host-range promoter-probe vectors. Mol Plant Microbe Interact 2000, 13:1243-1250. 10.1094/MPMI.2000.13.11.1243, 11059491.
-
(2000)
Mol Plant Microbe Interact
, vol.13
, pp. 1243-1250
-
-
Miller, W.G.1
Leveau, J.H.2
Lindow, S.E.3
-
16
-
-
0028598277
-
Synergistic binding of the Vibrio fischeri LuxR transcriptional activator domain and RNA polymerase to the lux promoter region
-
10.1073/pnas.91.26.12619, 45490, 7809088
-
Stevens AM, Dolan KM, Greenberg EP. Synergistic binding of the Vibrio fischeri LuxR transcriptional activator domain and RNA polymerase to the lux promoter region. Proc Natl Acad Sci USA 1994, 91:12619-12623. 10.1073/pnas.91.26.12619, 45490, 7809088.
-
(1994)
Proc Natl Acad Sci USA
, vol.91
, pp. 12619-12623
-
-
Stevens, A.M.1
Dolan, K.M.2
Greenberg, E.P.3
-
17
-
-
51349166103
-
Signal discrimination by differential regulation of protein stability in quorum sensing
-
10.1016/j.jmb.2008.08.009, 2573026, 18721812
-
Smith C, Song H, You L. Signal discrimination by differential regulation of protein stability in quorum sensing. J Mol Biol 2008, 382:1290-1297. 10.1016/j.jmb.2008.08.009, 2573026, 18721812.
-
(2008)
J Mol Biol
, vol.382
, pp. 1290-1297
-
-
Smith, C.1
Song, H.2
You, L.3
-
18
-
-
1642581508
-
Reversible acyl-homoserine lactone binding to purified Vibrio fischeri LuxR protein
-
10.1128/JB.186.3.631-637.2004, 321501, 14729687
-
Urbanowski ML, Lostroh CP, Greenberg EP. Reversible acyl-homoserine lactone binding to purified Vibrio fischeri LuxR protein. J Bacteriol 2004, 186:631-637. 10.1128/JB.186.3.631-637.2004, 321501, 14729687.
-
(2004)
J Bacteriol
, vol.186
, pp. 631-637
-
-
Urbanowski, M.L.1
Lostroh, C.P.2
Greenberg, E.P.3
-
19
-
-
0035852714
-
The quorum-sensing transcriptional regulator TraR requires its cognate signaling ligand for protein folding, protease resistance, and dimerization
-
10.1073/pnas.98.4.1507, 29287, 11171981
-
Zhu J, Winans SC. The quorum-sensing transcriptional regulator TraR requires its cognate signaling ligand for protein folding, protease resistance, and dimerization. Proc Natl Acad Sci USA 2001, 98:1507-1512. 10.1073/pnas.98.4.1507, 29287, 11171981.
-
(2001)
Proc Natl Acad Sci USA
, vol.98
, pp. 1507-1512
-
-
Zhu, J.1
Winans, S.C.2
-
20
-
-
0029032478
-
Intragenic suppression of a luxR mutation: characterization of an autoinducer-independent LuxR
-
Poellinger KA, Lee JP, Parales JV, Greenberg EP. Intragenic suppression of a luxR mutation: characterization of an autoinducer-independent LuxR. FEMS Microbiol Lett 1995, 129:97-101.
-
(1995)
FEMS Microbiol Lett
, vol.129
, pp. 97-101
-
-
Poellinger, K.A.1
Lee, J.P.2
Parales, J.V.3
Greenberg, E.P.4
-
21
-
-
0026323326
-
The C-terminal region of the Vibrio fischeri LuxR protein contains an inducer-independent lux gene activating domain
-
10.1073/pnas.88.24.11115, 53084, 1763027
-
Choi SH, Greenberg EP. The C-terminal region of the Vibrio fischeri LuxR protein contains an inducer-independent lux gene activating domain. Proc Natl Acad Sci USA 1991, 88:11115-11119. 10.1073/pnas.88.24.11115, 53084, 1763027.
-
(1991)
Proc Natl Acad Sci USA
, vol.88
, pp. 11115-11119
-
-
Choi, S.H.1
Greenberg, E.P.2
-
22
-
-
0026645260
-
Genetic dissection of DNA binding and luminescence gene activation by the Vibrio fischeri LuxR protein
-
206117, 1597420
-
Choi SH, Greenberg EP. Genetic dissection of DNA binding and luminescence gene activation by the Vibrio fischeri LuxR protein. J Bacteriol 1992, 174:4064-4069. 206117, 1597420.
-
(1992)
J Bacteriol
, vol.174
, pp. 4064-4069
-
-
Choi, S.H.1
Greenberg, E.P.2
-
23
-
-
43149108161
-
A bistable Rb-E2F switch underlies the restriction point
-
10.1038/ncb1711, 18364697
-
Yao G, Lee TJ, Mori S, Nevins JR, You L. A bistable Rb-E2F switch underlies the restriction point. Nature cell biology 2008, 10:476-482. 10.1038/ncb1711, 18364697.
-
(2008)
Nature cell biology
, vol.10
, pp. 476-482
-
-
Yao, G.1
Lee, T.J.2
Mori, S.3
Nevins, J.R.4
You, L.5
-
24
-
-
0024462539
-
Activation of bacterial porin gene expression by a chimeric signal transducer in response to aspartate
-
10.1126/science.2476847, 2476847
-
Utsumi R, Brissette RE, Rampersaud A, Forst SA, Oosawa K, Inouye M. Activation of bacterial porin gene expression by a chimeric signal transducer in response to aspartate. Science 1989, 245:1246-1249. 10.1126/science.2476847, 2476847.
-
(1989)
Science
, vol.245
, pp. 1246-1249
-
-
Utsumi, R.1
Brissette, R.E.2
Rampersaud, A.3
Forst, S.A.4
Oosawa, K.5
Inouye, M.6
-
25
-
-
0028115617
-
Transmembrane signalling by a hybrid protein: communication from the domain of chemoreceptor Trg that recognizes sugar-binding proteins to the kinase/phosphatase domain of osmosensor EnvZ
-
205168, 8106326
-
Baumgartner JW, Kim C, Brissette RE, Inouye M, Park C, Hazelbauer GL. Transmembrane signalling by a hybrid protein: communication from the domain of chemoreceptor Trg that recognizes sugar-binding proteins to the kinase/phosphatase domain of osmosensor EnvZ. J Bacteriol 1994, 176:1157-1163. 205168, 8106326.
-
(1994)
J Bacteriol
, vol.176
, pp. 1157-1163
-
-
Baumgartner, J.W.1
Kim, C.2
Brissette, R.E.3
Inouye, M.4
Park, C.5
Hazelbauer, G.L.6
-
26
-
-
28544442417
-
Synthetic biology: engineering Escherichia coli to see light
-
10.1038/nature04405, 16306980
-
Levskaya A, Chevalier AA, Tabor JJ, Simpson ZB, Lavery LA, Levy M, Davidson EA, Scouras A, Ellington AD, Marcotte EM, Voigt CA. Synthetic biology: engineering Escherichia coli to see light. Nature 2005, 438:441-442. 10.1038/nature04405, 16306980.
-
(2005)
Nature
, vol.438
, pp. 441-442
-
-
Levskaya, A.1
Chevalier, A.A.2
Tabor, J.J.3
Simpson, Z.B.4
Lavery, L.A.5
Levy, M.6
Davidson, E.A.7
Scouras, A.8
Ellington, A.D.9
Marcotte, E.M.10
Voigt, C.A.11
-
27
-
-
26244455507
-
Plasticity in amino acid sensing of the chimeric receptor Taz
-
10.1111/j.1365-2958.2005.04821.x, 16164563
-
Michalodimitrakis KM, Sourjik V, Serrano L. Plasticity in amino acid sensing of the chimeric receptor Taz. Mol Microbiol 2005, 58:257-266. 10.1111/j.1365-2958.2005.04821.x, 16164563.
-
(2005)
Mol Microbiol
, vol.58
, pp. 257-266
-
-
Michalodimitrakis, K.M.1
Sourjik, V.2
Serrano, L.3
-
28
-
-
34250857579
-
The design and development of Tar-EnvZ chimeric receptors
-
full_text, 17609131
-
Yoshida T, Phadtare S, Inouye M. The design and development of Tar-EnvZ chimeric receptors. Methods Enzymol 2007, 423:166-183. full_text, 17609131.
-
(2007)
Methods Enzymol
, vol.423
, pp. 166-183
-
-
Yoshida, T.1
Phadtare, S.2
Inouye, M.3
-
29
-
-
65549169234
-
Synthetic gene networks: the next wave in biotechnology?
-
10.1016/j.tibtech.2009.03.003, 19409633
-
Bhalerao KD. Synthetic gene networks: the next wave in biotechnology?. Trends Biotechnol 2009, 27:368-374. 10.1016/j.tibtech.2009.03.003, 19409633.
-
(2009)
Trends Biotechnol
, vol.27
, pp. 368-374
-
-
Bhalerao, K.D.1
-
30
-
-
46949091517
-
Refinement and standardization of synthetic biological parts and devices
-
10.1038/nbt1413, 18612302
-
Canton B, Labno A, Endy D. Refinement and standardization of synthetic biological parts and devices. Nat Biotechnol 2008, 26:787-793. 10.1038/nbt1413, 18612302.
-
(2008)
Nat Biotechnol
, vol.26
, pp. 787-793
-
-
Canton, B.1
Labno, A.2
Endy, D.3
-
31
-
-
28544451327
-
Foundations for engineering biology
-
10.1038/nature04342, 16306983
-
Endy D. Foundations for engineering biology. Nature 2005, 438:449-453. 10.1038/nature04342, 16306983.
-
(2005)
Nature
, vol.438
, pp. 449-453
-
-
Endy, D.1
-
32
-
-
56949108549
-
Toward scalable parts families for predictable design of biological circuits
-
10.1016/j.mib.2008.10.002, 18983935
-
Lucks JB, Qi L, Whitaker WR, Arkin AP. Toward scalable parts families for predictable design of biological circuits. Curr Opin Microbiol 2008, 11:567-573. 10.1016/j.mib.2008.10.002, 18983935.
-
(2008)
Curr Opin Microbiol
, vol.11
, pp. 567-573
-
-
Lucks, J.B.1
Qi, L.2
Whitaker, W.R.3
Arkin, A.P.4
-
33
-
-
0027202361
-
Ligand binding to the receptor domain regulates the ratio of kinase to phosphatase activities of the signaling domain of the hybrid Escherichia coli transmembrane receptor, Taz1
-
10.1006/jmbi.1993.1404, 8393937
-
Jin T, Inouye M. Ligand binding to the receptor domain regulates the ratio of kinase to phosphatase activities of the signaling domain of the hybrid Escherichia coli transmembrane receptor, Taz1. J Mol Biol 1993, 232:484-492. 10.1006/jmbi.1993.1404, 8393937.
-
(1993)
J Mol Biol
, vol.232
, pp. 484-492
-
-
Jin, T.1
Inouye, M.2
|