-
1
-
-
84861235431
-
Mining electronic health records: towards better research applications and clinical care
-
COI: 1:CAS:528:DC%2BC38XmtlGqtrY%3D, PID: 22549152
-
Jensen, P. B., Jensen, L. J., & Brunak, S. (2012). Mining electronic health records: towards better research applications and clinical care. Nature Reviews. Genetics, 13(6), 395–405.
-
(2012)
Nature Reviews. Genetics
, vol.13
, Issue.6
, pp. 395-405
-
-
Jensen, P.B.1
Jensen, L.J.2
Brunak, S.3
-
3
-
-
85024835241
-
-
Accessed 10th August 2015
-
PARAGON Inclusion/Exclusion Criteria (2015). https://sjonnalagadda.files.wordpress.com/2015/08/paragon_ie-criteria_10-01-2014.pdf. Accessed 10th August 2015.
-
(2015)
PARAGON Inclusion/Exclusion Criteria
-
-
-
4
-
-
0345863927
-
The unified medical language system (UMLS): integrating biomedical terminology
-
COI: 1:CAS:528:DC%2BD3sXhtVSrurvM, PID: 14681409
-
Bodenreider, O. (2004). The unified medical language system (UMLS): integrating biomedical terminology. Nucleic Acids Research, 32(Database issue), D267–D270.
-
(2004)
Nucleic Acids Research
, vol.32
, Issue.Database issue
, pp. D267-D270
-
-
Bodenreider, O.1
-
5
-
-
70349470770
-
ConText: an algorithm for determining negation, experiencer, and temporal status from clinical reports
-
PID: 19435614
-
Harkema, H., Dowling, J. N., Thornblade, T., & Chapman, W. W. (2009). ConText: an algorithm for determining negation, experiencer, and temporal status from clinical reports. Journal of Biomedical Informatics, 42(5), 839–851.
-
(2009)
Journal of Biomedical Informatics
, vol.42
, Issue.5
, pp. 839-851
-
-
Harkema, H.1
Dowling, J.N.2
Thornblade, T.3
Chapman, W.W.4
-
6
-
-
70349677742
-
Implementation and evaluation of a negation tagger in a pipeline-based system for information extract from pathology reports
-
PID: 15360896
-
Mitchell, K. J., Becich, M. J., Berman, J. J., Chapman, W. W., Gilbertson, J., Gupta, D., et al. (2004). Implementation and evaluation of a negation tagger in a pipeline-based system for information extract from pathology reports. Studies in Health Technology and Informatics, 107(Pt 1), 663–667.
-
(2004)
Studies in Health Technology and Informatics
, vol.107
, pp. 663-667
-
-
Mitchell, K.J.1
Becich, M.J.2
Berman, J.J.3
Chapman, W.W.4
Gilbertson, J.5
Gupta, D.6
-
7
-
-
84877259591
-
Baseline characteristics of patients in the treatment of preserved cardiac function heart failure with an aldosterone antagonist trial
-
COI: 1:CAS:528:DC%2BC3sXntVOqsLo%3D, PID: 23258572
-
Shah, S. J., Heitner, J. F., Sweitzer, N. K., Anand, I. S., Kim, H. Y., Harty, B., et al. (2013). Baseline characteristics of patients in the treatment of preserved cardiac function heart failure with an aldosterone antagonist trial. Circulation. Heart Failure, 6(2), 184–192.
-
(2013)
Circulation. Heart Failure
, vol.6
, Issue.2
, pp. 184-192
-
-
Shah, S.J.1
Heitner, J.F.2
Sweitzer, N.K.3
Anand, I.S.4
Kim, H.Y.5
Harty, B.6
-
8
-
-
84993982768
-
How to develop and implement a specialized heart failure with preserved ejection fraction clinical program
-
PID: 27796858
-
Shah, S. J., Cogswell, R., Ryan, J. J., & Sharma, K. (2016). How to develop and implement a specialized heart failure with preserved ejection fraction clinical program. Current Cardiology Reports, 18(12), 122.
-
(2016)
Current Cardiology Reports
, vol.18
, Issue.12
, pp. 122
-
-
Shah, S.J.1
Cogswell, R.2
Ryan, J.J.3
Sharma, K.4
-
9
-
-
78349263409
-
Achieving a nationwide learning health system
-
Friedman, C. P., Wong, A. K., & Blumenthal, D. (2010). Achieving a nationwide learning health system. Science Translational Medicine, 2(57), 57cm29–57cm29.
-
(2010)
Science Translational Medicine
, vol.2
, Issue.57
, pp. 57cm29
-
-
Friedman, C.P.1
Wong, A.K.2
Blumenthal, D.3
-
10
-
-
84875373295
-
Conceptualising and creating a global learning health system
-
PID: 22717661
-
Friedman, C., & Rigby, M. (2013). Conceptualising and creating a global learning health system. International Journal of Medical Informatics, 82(4), e63–e71.
-
(2013)
International Journal of Medical Informatics
, vol.82
, Issue.4
, pp. e63-e71
-
-
Friedman, C.1
Rigby, M.2
-
11
-
-
2942578063
-
A two-gene expression ratio predicts clinical outcome in breast cancer patients treated with tamoxifen
-
COI: 1:CAS:528:DC%2BD2cXltlGgsLs%3D, PID: 15193263
-
Ma, X.-J., Wang, Z., Ryan, P. D., Isakoff, S. J., Barmettler, A., Fuller, A., et al. (2004). A two-gene expression ratio predicts clinical outcome in breast cancer patients treated with tamoxifen. Cancer Cell, 5(6), 607–616.
-
(2004)
Cancer Cell
, vol.5
, Issue.6
, pp. 607-616
-
-
Ma, X.-J.1
Wang, Z.2
Ryan, P.D.3
Isakoff, S.J.4
Barmettler, A.5
Fuller, A.6
-
12
-
-
84863552304
-
Detecting pregnancy use of non-hormonal category X medications in electronic medical records
-
Strom, B. L., Schinnar, R., Jones, J., Bilker, W. B., Weiner, M. G., Hennessy, S., et al. (2011). Detecting pregnancy use of non-hormonal category X medications in electronic medical records. Journal of the American Medical Informatics Association, 18(Suppl 1), i81–i86.
-
(2011)
Journal of the American Medical Informatics Association
, vol.18
, pp. i81-i86
-
-
Strom, B.L.1
Schinnar, R.2
Jones, J.3
Bilker, W.B.4
Weiner, M.G.5
Hennessy, S.6
-
13
-
-
84863557462
-
Use of electronic health record data to evaluate overuse of cervical cancer screening
-
Mathias, J. S., Gossett, D., & Baker, D. W. (2012). Use of electronic health record data to evaluate overuse of cervical cancer screening. Journal of the American Medical Informatics Association, 19(e1), e96–e101.
-
(2012)
Journal of the American Medical Informatics Association
, vol.19
, Issue.e1
, pp. e96-e101
-
-
Mathias, J.S.1
Gossett, D.2
Baker, D.W.3
-
14
-
-
84931577759
-
Identifying prognostic factors predicting outcome in patients with chronic neck pain after multimodal treatment: a retrospective study
-
COI: 1:STN:280:DC%2BC2MrpslWnsQ%3D%3D, PID: 25725590
-
De Pauw, R., Kregel, J., De Blaiser, C., Van Akeleyen, J., Logghe, T., Danneels, L., et al. (2015). Identifying prognostic factors predicting outcome in patients with chronic neck pain after multimodal treatment: a retrospective study. Manual Therapy, 20(4), 592–597.
-
(2015)
Manual Therapy
, vol.20
, Issue.4
, pp. 592-597
-
-
De Pauw, R.1
Kregel, J.2
De Blaiser, C.3
Van Akeleyen, J.4
Logghe, T.5
Danneels, L.6
-
15
-
-
8844264542
-
A first step towards translating evidence into practice: heart failure in a community practice-based research network
-
PID: 15606986
-
Onofrei, M., Hunt, J., Siemienczuk, J., Touchette, D. R., & Middleton, B. (2004). A first step towards translating evidence into practice: heart failure in a community practice-based research network. Informatics in Primary Care, 12(3), 139–145.
-
(2004)
Informatics in Primary Care
, vol.12
, Issue.3
, pp. 139-145
-
-
Onofrei, M.1
Hunt, J.2
Siemienczuk, J.3
Touchette, D.R.4
Middleton, B.5
-
16
-
-
36749031587
-
An electronic health record based on structured narrative
-
PID: 17947628
-
Johnson, S. B., Bakken, S., Dine, D., Hyun, S., Mendonça, E., Morrison, F., et al. (2008). An electronic health record based on structured narrative. Journal of the American Medical Informatics Association, 15(1), 54–64.
-
(2008)
Journal of the American Medical Informatics Association
, vol.15
, Issue.1
, pp. 54-64
-
-
Johnson, S.B.1
Bakken, S.2
Dine, D.3
Hyun, S.4
Mendonça, E.5
Morrison, F.6
-
17
-
-
84880774696
-
How many medication orders are entered through free-text in EHRs?—a study on hypoglycemic agents
-
Zhou, L., Mahoney, L. M., Shakurova, A., Goss, F., Chang, F. Y., Bates, D. W., et al. (2012). How many medication orders are entered through free-text in EHRs?—a study on hypoglycemic agents. American Medical Informatics Association Annual Symposium Proceedings, 2012, 1079–1088.
-
(2012)
American Medical Informatics Association Annual Symposium Proceedings
, vol.2012
, pp. 1079-1088
-
-
Zhou, L.1
Mahoney, L.M.2
Shakurova, A.3
Goss, F.4
Chang, F.Y.5
Bates, D.W.6
-
18
-
-
81055125476
-
Handling anticipated exceptions in clinical care: investigating clinician use of ‘exit strategies’ in an electronic health records system
-
Zheng, K., Hanauer, D. A., Padman, R., Johnson, M. P., Hussain, A. A., Ye, W., et al. (2011). Handling anticipated exceptions in clinical care: investigating clinician use of ‘exit strategies’ in an electronic health records system. Journal of the American Medical Informatics Association, 18(6), 883–889.
-
(2011)
Journal of the American Medical Informatics Association
, vol.18
, Issue.6
, pp. 883-889
-
-
Zheng, K.1
Hanauer, D.A.2
Padman, R.3
Johnson, M.P.4
Hussain, A.A.5
Ye, W.6
-
19
-
-
85017728459
-
How essential are unstructured clinical narratives and information fusion to clinical trial recruitment?
-
PID: 25717416
-
Raghavan, P., Chen, J. L., Fosler-Lussier, E., & Lai, A. M. (2014). How essential are unstructured clinical narratives and information fusion to clinical trial recruitment? AMIA Jt Summits Transl Sci Proc, 2014, 218–223.
-
(2014)
AMIA Jt Summits Transl Sci Proc
, vol.2014
, pp. 218-223
-
-
Raghavan, P.1
Chen, J.L.2
Fosler-Lussier, E.3
Lai, A.M.4
-
20
-
-
78650497348
-
A systematic literature review of automated clinical coding and classification systems
-
Stanfill, M. H., Williams, M., Fenton, S. H., Jenders, R. A., & Hersh, W. R. (2010). A systematic literature review of automated clinical coding and classification systems. Journal of the American Medical Informatics Association, 17(6), 646–651.
-
(2010)
Journal of the American Medical Informatics Association
, vol.17
, Issue.6
, pp. 646-651
-
-
Stanfill, M.H.1
Williams, M.2
Fenton, S.H.3
Jenders, R.A.4
Hersh, W.R.5
-
21
-
-
80052053976
-
The promise of electronic records: around the corner or down the road?
-
COI: 1:CAS:528:DC%2BC3MXhtFSms77F, PID: 21862751
-
Jha, A. K. (2011). The promise of electronic records: around the corner or down the road? JAMA, 306(8), 880–881.
-
(2011)
JAMA
, vol.306
, Issue.8
, pp. 880-881
-
-
Jha, A.K.1
-
22
-
-
84883747248
-
Natural language processing: State of the art and prospects for significant progress, a workshop sponsored by the National Library of Medicine
-
Friedman, C., Rindflesch, T. C., & Corn, M. (2013). Natural language processing: State of the art and prospects for significant progress, a workshop sponsored by the National Library of Medicine. Journal of Biomedical Informatics, 46(5), 765–773.
-
(2013)
Journal of Biomedical Informatics
, vol.46
, Issue.5
, pp. 765-773
-
-
Friedman, C.1
Rindflesch, T.C.2
Corn, M.3
-
23
-
-
84894026081
-
A review of approaches to identifying patient phenotype cohorts using electronic health records
-
Shivade, C., Raghavan, P., Fosler-Lussier, E., Embi, P. J., Elhadad, N., Johnson, S. B., et al. (2014). A review of approaches to identifying patient phenotype cohorts using electronic health records. Journal of the American Medical Informatics Association, 21(2), 221–230.
-
(2014)
Journal of the American Medical Informatics Association
, vol.21
, Issue.2
, pp. 221-230
-
-
Shivade, C.1
Raghavan, P.2
Fosler-Lussier, E.3
Embi, P.J.4
Elhadad, N.5
Johnson, S.B.6
-
24
-
-
77958187989
-
-
Nguyen, A. N., Lawley, M. J., Hansen, D. P., Bowman, R. V., Clarke, B. E., Duhig, E. E., et al. (2010). Symbolic rule-based classification of lung cancer stages from free-text pathology reports. 17(4), 440–445.
-
(2010)
Symbolic rule-based classification of lung cancer stages from free-text pathology reports.
, vol.17
, Issue.4
, pp. 440-445
-
-
Nguyen, A.N.1
Lawley, M.J.2
Hansen, D.P.3
Bowman, R.V.4
Clarke, B.E.5
Duhig, E.E.6
-
25
-
-
71949119436
-
Use of international classification of diseases, ninth revision, clinical modification codes and medication use data to identify nosocomial Clostridium difficile infection
-
PID: 19803724
-
Mia Schmiedeskamp, P. P., Spencer Harpe, P. P. M. P. H., Ronald Polk, P., Michael Oinonen, P. M. P. H., & Amy Pakyz, P. M. S. (2009). Use of international classification of diseases, ninth revision, clinical modification codes and medication use data to identify nosocomial Clostridium difficile infection. Infection Control and Hospital Epidemiology, 30(11), 1070–1076.
-
(2009)
Infection Control and Hospital Epidemiology
, vol.30
, Issue.11
, pp. 1070-1076
-
-
Mia Schmiedeskamp, P.P.1
Spencer Harpe, P.P.M.P.H.2
Ronald Polk, P.3
Michael Oinonen, P.M.P.H.4
Amy Pakyz, P.M.S.5
-
26
-
-
77950867408
-
Automated matching software for clinical trials eligibility: measuring efficiency and flexibility
-
PID: 20230913
-
Penberthy, L., Brown, R., Puma, F., & Dahman, B. (2010). Automated matching software for clinical trials eligibility: measuring efficiency and flexibility. Contemporary Clinical Trials, 31(3), 207–217.
-
(2010)
Contemporary Clinical Trials
, vol.31
, Issue.3
, pp. 207-217
-
-
Penberthy, L.1
Brown, R.2
Puma, F.3
Dahman, B.4
-
27
-
-
84857146745
-
Use of diverse electronic medical record systems to identify genetic risk for type 2 diabetes within a genome-wide association study
-
Kho, A. N., Hayes, M. G., Rasmussen-Torvik, L., Pacheco, J. A., Thompson, W. K., Armstrong, L. L., et al. (2012). Use of diverse electronic medical record systems to identify genetic risk for type 2 diabetes within a genome-wide association study. Journal of the American Medical Informatics Association, 19(2), 212–218.
-
(2012)
Journal of the American Medical Informatics Association
, vol.19
, Issue.2
, pp. 212-218
-
-
Kho, A.N.1
Hayes, M.G.2
Rasmussen-Torvik, L.3
Pacheco, J.A.4
Thompson, W.K.5
Armstrong, L.L.6
-
28
-
-
49949092803
-
Automated identification of acute hepatitis B using electronic medical record data to facilitate public health surveillance
-
PID: 18612462
-
Klompas, M., Haney, G., Church, D., Lazarus, R., Hou, X., & Platt, R. (2008). Automated identification of acute hepatitis B using electronic medical record data to facilitate public health surveillance. PloS One, 3(7), e2626.
-
(2008)
PloS One
, vol.3
, Issue.7
-
-
Klompas, M.1
Haney, G.2
Church, D.3
Lazarus, R.4
Hou, X.5
Platt, R.6
-
29
-
-
84872897190
-
Early prediction of the response of breast tumors to neoadjuvant chemotherapy using quantitative MRI and machine learning
-
Mani, S., Chen, Y., Arlinghaus, L. R., Li, X., Chakravarthy, A. B., Bhave, S. R., et al. (2011). Early prediction of the response of breast tumors to neoadjuvant chemotherapy using quantitative MRI and machine learning. American Medical Informatics Association Annual Symposium Proceedings, 2011, 868–877.
-
(2011)
American Medical Informatics Association Annual Symposium Proceedings
, vol.2011
, pp. 868-877
-
-
Mani, S.1
Chen, Y.2
Arlinghaus, L.R.3
Li, X.4
Chakravarthy, A.B.5
Bhave, S.R.6
-
30
-
-
79952741160
-
Data mining methods for classification of Medium-Chain Acyl-CoA dehydrogenase deficiency (MCADD) using non-derivatized tandem MS neonatal screening data
-
PID: 21167313
-
Van den Bulcke, T., Vanden Broucke, P., Van Hoof, V., Wouters, K., Vanden Broucke, S., Smits, G., et al. (2011). Data mining methods for classification of Medium-Chain Acyl-CoA dehydrogenase deficiency (MCADD) using non-derivatized tandem MS neonatal screening data. Journal of Biomedical Informatics, 44(2), 319–325.
-
(2011)
Journal of Biomedical Informatics
, vol.44
, Issue.2
, pp. 319-325
-
-
Van den Bulcke, T.1
Vanden Broucke, P.2
Van Hoof, V.3
Wouters, K.4
Vanden Broucke, S.5
Smits, G.6
-
31
-
-
80052891202
-
Combining PubMed knowledge and EHR data to develop a weighted bayesian network for pancreatic cancer prediction
-
PID: 21642013
-
Zhao, D., & Weng, C. (2011). Combining PubMed knowledge and EHR data to develop a weighted bayesian network for pancreatic cancer prediction. Journal of Biomedical Informatics, 44(5), 859–868.
-
(2011)
Journal of Biomedical Informatics
, vol.44
, Issue.5
, pp. 859-868
-
-
Zhao, D.1
Weng, C.2
-
32
-
-
84880787212
-
Learning to predict post-hospitalization VTE risk from EHR data
-
Kawaler, E., Cobian, A., Peissig, P., Cross, D., Yale, S., & Craven, M. (2012). Learning to predict post-hospitalization VTE risk from EHR data. American Medical Informatics Association Annual Symposium Proceedings, 2012, 436–445.
-
(2012)
American Medical Informatics Association Annual Symposium Proceedings
, vol.2012
, pp. 436-445
-
-
Kawaler, E.1
Cobian, A.2
Peissig, P.3
Cross, D.4
Yale, S.5
Craven, M.6
-
33
-
-
77958007735
-
STRIDE—an integrated standards-based translational research informatics platform
-
Lowe, H. J., Ferris, T. A., Hernandez, P. M., & Weber, S. C. (2009). STRIDE—an integrated standards-based translational research informatics platform. American Medical Informatics Association Annual Symposium Proceedings, 2009, 391–395.
-
(2009)
American Medical Informatics Association Annual Symposium Proceedings
, vol.2009
, pp. 391-395
-
-
Lowe, H.J.1
Ferris, T.A.2
Hernandez, P.M.3
Weber, S.C.4
-
34
-
-
16544392037
-
StarTracker: an integrated, web-based clinical search engine
-
Gregg, W., Jirjis, J., Lorenzi, N. M., & Giuse, D. (2003). StarTracker: an integrated, web-based clinical search engine. AMIA Annual Symposium Proceedings, 855.
-
(2003)
AMIA Annual Symposium Proceedings
, pp. 855
-
-
Gregg, W.1
Jirjis, J.2
Lorenzi, N.M.3
Giuse, D.4
-
35
-
-
84930749196
-
Supporting information retrieval from electronic health records: a report of University of Michigan’s nine-year experience in developing and using the Electronic Medical Record Search Engine (EMERSE)
-
PID: 25979153
-
Hanauer, D. A., Mei, Q., Law, J., Khanna, R., & Zheng, K. (2015). Supporting information retrieval from electronic health records: a report of University of Michigan’s nine-year experience in developing and using the Electronic Medical Record Search Engine (EMERSE). Journal of Biomedical Informatics, 55, 290–300.
-
(2015)
Journal of Biomedical Informatics
, vol.55
, pp. 290-300
-
-
Hanauer, D.A.1
Mei, Q.2
Law, J.3
Khanna, R.4
Zheng, K.5
-
36
-
-
84928096517
-
Advanced search of the electronic medical record: augmenting safety and efficiency in radiology
-
PID: 20678732
-
Zalis, M., & Harris, M. (2010). Advanced search of the electronic medical record: augmenting safety and efficiency in radiology. Journal of the American College of Radiology, 7(8), 625–633.
-
(2010)
Journal of the American College of Radiology
, vol.7
, Issue.8
, pp. 625-633
-
-
Zalis, M.1
Harris, M.2
-
37
-
-
84880830110
-
Risk stratification of ICU patients using topic models inferred from unstructured progress notes
-
Lehman, L. W., Saeed, M., Long, W., Lee, J., & Mark, R. (2012). Risk stratification of ICU patients using topic models inferred from unstructured progress notes. American Medical Informatics Association Annual Symposium Proceedings, 2012, 505–511.
-
(2012)
American Medical Informatics Association Annual Symposium Proceedings
, vol.2012
, pp. 505-511
-
-
Lehman, L.W.1
Saeed, M.2
Long, W.3
Lee, J.4
Mark, R.5
-
38
-
-
84874213343
-
Naive electronic health record phenotype identification for rheumatoid arthritis
-
Carroll, R. J., Eyler, A. E., & Denny, J. C. (2011). Naive electronic health record phenotype identification for rheumatoid arthritis. American Medical Informatics Association Annual Symposium Proceedings, 2011, 189–196.
-
(2011)
American Medical Informatics Association Annual Symposium Proceedings
, vol.2011
, pp. 189-196
-
-
Carroll, R.J.1
Eyler, A.E.2
Denny, J.C.3
-
39
-
-
77955297110
-
Electronic medical records for discovery research in rheumatoid arthritis
-
PID: 20235204
-
Liao, K. P., Cai, T., Gainer, V., Goryachev, S., Zeng-treitler, Q., Raychaudhuri, S., et al. (2010). Electronic medical records for discovery research in rheumatoid arthritis. Arthritis Care and Research, 62(8), 1120–1127.
-
(2010)
Arthritis Care and Research
, vol.62
, Issue.8
, pp. 1120-1127
-
-
Liao, K.P.1
Cai, T.2
Gainer, V.3
Goryachev, S.4
Zeng-treitler, Q.5
Raychaudhuri, S.6
-
40
-
-
84872222809
-
Pneumonia identification using statistical feature selection
-
Bejan, C. A., Xia, F., Vanderwende, L., Wurfel, M. M., & Yetisgen-Yildiz, M. (2012). Pneumonia identification using statistical feature selection. Journal of the American Medical Informatics Association, 19(5), 817–823.
-
(2012)
Journal of the American Medical Informatics Association
, vol.19
, Issue.5
, pp. 817-823
-
-
Bejan, C.A.1
Xia, F.2
Vanderwende, L.3
Wurfel, M.M.4
Yetisgen-Yildiz, M.5
-
41
-
-
84906264711
-
Employing computers for the recruitment into clinical trials: a comprehensive systematic review
-
PID: 24985568
-
Kopcke, F., & Prokosch, H. U. (2014). Employing computers for the recruitment into clinical trials: a comprehensive systematic review. Journal of Medical Internet Research, 16(7), e161.
-
(2014)
Journal of Medical Internet Research
, vol.16
, Issue.7
-
-
Kopcke, F.1
Prokosch, H.U.2
-
42
-
-
84929334937
-
Automated clinical trial eligibility prescreening: increasing the efficiency of patient identification for clinical trials in the emergency department
-
PID: 25030032
-
Ni, Y., Kennebeck, S., Dexheimer, J. W., McAneney, C. M., Tang, H., Lingren, T., et al. (2015). Automated clinical trial eligibility prescreening: increasing the efficiency of patient identification for clinical trials in the emergency department. Journal of the American Medical Informatics Association, 22(1), 166–178.
-
(2015)
Journal of the American Medical Informatics Association
, vol.22
, Issue.1
, pp. 166-178
-
-
Ni, Y.1
Kennebeck, S.2
Dexheimer, J.W.3
McAneney, C.M.4
Tang, H.5
Lingren, T.6
|