메뉴 건너뛰기




Volumn 3, Issue 1, 2017, Pages

Discovery of flavivirus-derived endogenous viral elements in Anopheles mosquito genomes supports the existence of Anopheles-associated insect-specific flaviviruses

Author keywords

Anopheles minimus; Anopheles sinensis; EVE; Flavivirus; host range; ISF

Indexed keywords

ANOPHELES MINIMUS; ANOPHELES SINENSIS; ARBOVIRUS; CLADISTICS; CONTAMINATION; DNA TRANSCRIPTION; FLAVIVIRUS; GENOME; HOST RANGE; NONHUMAN; PHYLOGENY; TRANSCRIPTION INITIATION;

EID: 85020016189     PISSN: None     EISSN: 20571577     Source Type: Journal    
DOI: 10.1093/ve/vew035     Document Type: Article
Times cited : (41)

References (41)
  • 1
    • 84933578221 scopus 로고    scopus 로고
    • Endogenous viruses: Connecting recent and ancient viral evolution
    • Aiewsakun, P., and Katzourakis, A. (2015) 'Endogenous Viruses: Connecting Recent and Ancient Viral Evolution', Virology, 479-480, 26-37
    • (2015) Virology , vol.479-480 , pp. 26-37
    • Aiewsakun, P.1    Katzourakis, A.2
  • 2
    • 65249109142 scopus 로고    scopus 로고
    • Detection and monitoring of mosquito flaviviruses in Spain between 2001 and 2005
    • Aranda, C. et al. (2009) 'Detection and Monitoring of Mosquito Flaviviruses in Spain Between 2001 and 2005', Vector Borne and Zoonotic Diseases, 9: 171-8
    • (2009) Vector Borne and Zoonotic Diseases , vol.9 , pp. 171-178
    • Aranda, C.1
  • 5
    • 0034840803 scopus 로고    scopus 로고
    • West nile virus infection in birds and mosquitoes New York state, 2000
    • Bernard, K. A. et al. (2001) 'West Nile Virus Infection in Birds and Mosquitoes, New York State, 2000', Emerging Infectious Diseases, 7: 679-85
    • (2001) Emerging Infectious Diseases , vol.7 , pp. 679-685
    • Bernard, K.A.1
  • 6
    • 84928951064 scopus 로고    scopus 로고
    • Insect-specific flaviviruses: A systematic review of their discovery host range, mode of transmission, superinfection exclusion potential and genomic organization
    • Blitvich, B. J., and Firth, A. E. (2015) 'Insect-Specific Flaviviruses: A Systematic Review of Their Discovery, Host Range, Mode of Transmission, Superinfection Exclusion Potential and Genomic Organization', Viruses, 7: 1927-59
    • (2015) Viruses , vol.7 , pp. 1927-1959
    • Blitvich, B.J.1    Firth, A.E.2
  • 7
    • 11144283111 scopus 로고    scopus 로고
    • Infection patterns of o'nyong nyong virus in the malaria-transmitting mosquito anopheles gambiae
    • Brault, A. C. et al. (2004) 'Infection Patterns of O'nyong Nyong Virus in the Malaria-Transmitting Mosquito, Anopheles gambiae', Insect Molecular Biology, 13: 625-35
    • (2004) Insect Molecular Biology , vol.13 , pp. 625-635
    • Brault, A.C.1
  • 8
    • 84877116349 scopus 로고    scopus 로고
    • Usutu virus persistence and west nile virus inactivity in the emilia-romagna region (Italy) in 2011
    • Calzolari, M. et al. (2013) 'Usutu Virus Persistence and West Nile Virus Inactivity in the Emilia-Romagna Region (Italy) in 2011', PLoS One, 8: E63978
    • (2013) PLoS One , vol.8 , pp. e63978
    • Calzolari, M.1
  • 9
    • 74049108922 scopus 로고    scopus 로고
    • Blast: Architecture and applications
    • Camacho, C. et al. (2009) 'BLAST: Architecture and Applications', BMC Bioinformatics, 10: 421
    • (2009) BMC Bioinformatics , vol.10 , pp. 421
    • Camacho, C.1
  • 10
    • 67650757433 scopus 로고    scopus 로고
    • Trimal: A tool for automated alignment trimming in large-scale phylogenetic analyses
    • Capella-Gutiérrez, S., Silla-Martinez, J. M., and Gabaldon, T. (2009) 'trimAl: A Tool for Automated Alignment Trimming in Large-Scale Phylogenetic Analyses', Bioinformatics, 25: 1972-3
    • (2009) Bioinformatics , vol.25 , pp. 1972-1973
    • Capella-Gutiérrez, S.1    Silla-Martinez, J.M.2    Gabaldon, T.3
  • 11
    • 84946555284 scopus 로고    scopus 로고
    • Genome sequence of the asian tiger mosquito aedes albopictus, reveals insights into its biology, genetics, and evolution
    • Chen, X.-G. et al. (2015) 'Genome sequence of the Asian Tiger mosquito, Aedes albopictus, Reveals Insights into its Biology, Genetics, and Evolution', Proceedings of the National Academy of Sciences of the United States of America, 112: E5907-15
    • (2015) Proceedings of the National Academy of Sciences of the United States of America , vol.112 , pp. E5907-E5915
    • Chen, X.-G.1
  • 12
    • 84875583531 scopus 로고    scopus 로고
    • Arboviruses-characteristics and concepts
    • CABI
    • Clements, A. N. 2012. 'Arboviruses-Characteristics and Concepts', in The Biology of Mosquitoes. pp. 90-173. CABI.
    • (2012) The Biology of Mosquitoes , pp. 90-173
    • Clements, A.N.1
  • 13
    • 3342978236 scopus 로고    scopus 로고
    • Sequences of flavivirus-related RNA viruses persist in DNA form integrated in the genome of aedes spp. Mosquitoes
    • Crochu, S. et al. (2004) 'Sequences of Flavivirus-Related RNA Viruses Persist in DNA form Integrated in the Genome of Aedes spp. Mosquitoes', Journal of General Virology, 85: 1971-80
    • (2004) Journal of General Virology , vol.85 , pp. 1971-1980
    • Crochu, S.1
  • 14
    • 84866524616 scopus 로고    scopus 로고
    • Distribution of mosquitoes and mosquito-borne viruses along the China-myanmar border in yunnan province
    • Feng, Y. et al. (2012) 'Distribution of Mosquitoes and Mosquito-Borne Viruses Along the China-Myanmar Border in Yunnan Province', Japanese Journal of Infectious Diseases, 65: 215-21
    • (2012) Japanese Journal of Infectious Diseases , vol.65 , pp. 215-221
    • Feng, Y.1
  • 15
    • 84858429240 scopus 로고    scopus 로고
    • Endogenous viruses: Insights into viral evolution and impact on host biology
    • Feschotte, C., and Gilbert, C. (2012) 'Endogenous Viruses: Insights into Viral Evolution and Impact on Host Biology', Nature Reviews Genetics, 13: 283-96
    • (2012) Nature Reviews Genetics , vol.13 , pp. 283-296
    • Feschotte, C.1    Gilbert, C.2
  • 16
    • 0015368535 scopus 로고
    • Isolation in Portugal of west nile virus from anopheles maculipennis mosquitoes
    • Filipe, A. R. (1972) 'Isolation in Portugal of West Nile Virus from Anopheles maculipennis Mosquitoes', Acta Virologica, 16: 361
    • (1972) Acta Virologica , vol.16 , pp. 361
    • Filipe, A.R.1
  • 17
    • 70449427069 scopus 로고    scopus 로고
    • Hypothesis for heritable anti-viral immunity in crustaceans and insects
    • Flegel, T. W. (2009) 'Hypothesis for Heritable, Anti-viral Immunity in Crustaceans and Insects', Biology Direct, 4: 32
    • (2009) Biology Direct , vol.4 , pp. 32
    • Flegel, T.W.1
  • 18
    • 84906968902 scopus 로고    scopus 로고
    • Inhibition of borna disease virus replication by an endogenous bornavirus-like element in the ground squirrel genome
    • Fujino, K. et al. (2014) 'Inhibition of Borna Disease Virus Replication by an Endogenous Bornavirus-Like Element in the Ground Squirrel Genome', Proceedings of the National Academy of Sciences of the United States of America, 111: 13175-80
    • (2014) Proceedings of the National Academy of Sciences of the United States of America , vol.111 , pp. 13175-13180
    • Fujino, K.1
  • 19
    • 80054890343 scopus 로고    scopus 로고
    • The evolution of endogenous viral elements
    • Holmes, E. C. (2011) 'The Evolution of Endogenous Viral Elements', Cell Host Microbe, 10: 368-77
    • (2011) Cell Host Microbe , vol.10 , pp. 368-377
    • Holmes, E.C.1
  • 20
    • 0037020114 scopus 로고    scopus 로고
    • The genome sequence of the malaria mosquito anopheles gambiae
    • Holt, R. A. et al. (2002) 'The genome sequence of the malaria mosquito Anopheles gambiae', Science, 298: 129-49
    • (2002) Science , vol.298 , pp. 129-149
    • Holt, R.A.1
  • 22
    • 0037100671 scopus 로고    scopus 로고
    • Mafft: A novel method for rapid multiple sequence alignment based on fast fourier transform
    • Katoh, K. et al. (2002) 'MAFFT: A Novel Method for Rapid Multiple Sequence Alignment Based on Fast Fourier Transform', Nucleic Acids Research, 30: 3059-66
    • (2002) Nucleic Acids Research , vol.30 , pp. 3059-3066
    • Katoh, K.1
  • 23
    • 78649718268 scopus 로고    scopus 로고
    • Endogenous viral elements in animal genomes
    • Katzourakis, A., and Gifford, R. J. (2010) 'Endogenous Viral Elements in Animal Genomes', PLoS Genetics, 6: E1001191
    • (2010) PLoS Genetics , vol.6 , pp. e1001191
    • Katzourakis, A.1    Gifford, R.J.2
  • 24
    • 84899645893 scopus 로고    scopus 로고
    • West nile virus surveillance in mosquitoes April to October 2013, vojvodina province, serbia: Implications for the 2014 season
    • Kemenesi, G. et al. (2014) 'West Nile Virus Surveillance in Mosquitoes, April to October 2013, Vojvodina Province, Serbia: Implications for the 2014 Season', Eurosurveillance, 19: 20779
    • (2014) Eurosurveillance , vol.19 , pp. 20779
    • Kemenesi, G.1
  • 25
    • 0034840337 scopus 로고    scopus 로고
    • West nile virus infection in mosquitoes birds, horses, and humans, staten island, New York, 2000
    • Kulasekera, V. L. et al. (2001) 'West Nile Virus Infection in Mosquitoes, Birds, Horses, and Humans, Staten Island, New York, 2000', Emerging Infectious Diseases, 7: 722-5
    • (2001) Emerging Infectious Diseases , vol.7 , pp. 722-725
    • Kulasekera, V.L.1
  • 26
    • 84859210032 scopus 로고    scopus 로고
    • Fast gapped-read alignment with bowtie 2
    • U54
    • Langmead, B., and Salzberg, S. L. (2012) 'Fast Gapped-Read Alignment with Bowtie 2', Nature Methods, 9: 357-U54.
    • (2012) Nature Methods , vol.9 , pp. 357
    • Langmead, B.1    Salzberg, S.L.2
  • 27
    • 78651301328 scopus 로고    scopus 로고
    • The sequence read arcHIVe
    • International Nucleotide Sequence Database Collaboration.
    • Leinonen, R., Sugawara, H., and Shumway, M. International Nucleotide Sequence Database Collaboration. (2011) 'The Sequence Read ArcHIVe', Nucleic Acids Research, 39: D19-21
    • (2011) Nucleic Acids Research , vol.39 , pp. D19-D21
    • Leinonen, R.1    Sugawara, H.2    Shumway, M.3
  • 28
    • 68549104404 scopus 로고    scopus 로고
    • The sequence alignment/map format and samtools
    • 1000 Genome Project Data Processing Subgroupet al.
    • Li, H., 1000 Genome Project Data Processing Subgroup. et al. (2009) 'The Sequence Alignment/Map Format and SAMtools', Bioinformatics, 25: 2078-9.
    • (2009) Bioinformatics , vol.25 , pp. 2078-2079
    • Li, H.1
  • 29
    • 33745634395 scopus 로고    scopus 로고
    • Cd-hit: A fast program for clustering and comparing large sets of protein or nucleotide sequences
    • Li, W., and Godzik, A. (2006) 'Cd-hit: A Fast Program for Clustering and Comparing Large Sets of Protein or Nucleotide Sequences', Bioinformatics, 22: 1658-9
    • (2006) Bioinformatics , vol.22 , pp. 1658-1659
    • Li, W.1    Godzik, A.2
  • 30
    • 84940462888 scopus 로고    scopus 로고
    • Distribution and phylogenetic analysis of culex flavivirus in mosquitoes in China
    • Liang, W. et al. (2015) 'Distribution and Phylogenetic Analysis of Culex Flavivirus in Mosquitoes in China', ArcHIVes in Virology, 160: 2259-68
    • (2015) ArcHIVes in Virology , vol.160 , pp. 2259-2268
    • Liang, W.1
  • 31
    • 84872197749 scopus 로고    scopus 로고
    • Japanese encephalitis virus in mosquitoes and swine in yunnan province China 2009-2010
    • Liu, H. et al. (2013) 'Japanese Encephalitis Virus in Mosquitoes and Swine in Yunnan Province, China 2009-2010', Vector Borne and Zoonotic Diseases, 13: 41-9
    • (2013) Vector Borne and Zoonotic Diseases , vol.13 , pp. 41-49
    • Liu, H.1
  • 32
    • 84924993562 scopus 로고    scopus 로고
    • Whole-genome sequencing reveals absence of recent gene flow and separate demographic histories for anopheles punctulatus mosquitoes in Papua New Guinea
    • Logue, K. et al. (2015) 'Whole-Genome Sequencing Reveals Absence of Recent Gene Flow and Separate Demographic Histories for Anopheles Punctulatus Mosquitoes in Papua New Guinea', Molecular Ecology, 24: 1263-74
    • (2015) Molecular Ecology , vol.24 , pp. 1263-1274
    • Logue, K.1
  • 33
    • 84941042486 scopus 로고    scopus 로고
    • Cdd: Ncbi's conserved domain database
    • Marchler-Bauer, A. et al. (2015) 'CDD: NCBI's Conserved Domain Database', Nucleic Acids Research, 43: D222-6
    • (2015) Nucleic Acids Research , vol.43 , pp. D222-D226
    • Marchler-Bauer, A.1
  • 34
    • 84923899620 scopus 로고    scopus 로고
    • New insights into flavivirus evolution taxonomy and biogeographic history, extended by analysis of canonical and alternative coding sequences
    • Moureau, G. et al. (2015) 'New Insights into Flavivirus Evolution, Taxonomy and Biogeographic History, Extended by Analysis of Canonical and Alternative Coding Sequences', PLoS One, 10: E0117849
    • (2015) PLoS One , vol.10 , pp. e0117849
    • Moureau, G.1
  • 35
    • 84922482170 scopus 로고    scopus 로고
    • Mosquito genomics. Highly evolvable malaria vectors: The genomes of 16 anopheles mosquitoes
    • Neafsey, D. E. et al. (2015) 'Mosquito Genomics. Highly Evolvable Malaria Vectors: The Genomes of 16 Anopheles Mosquitoes', Science, 347: 1258522-1258522
    • (2015) Science , vol.347 , pp. 1258522
    • Neafsey, D.E.1
  • 36
    • 77951770756 scopus 로고    scopus 로고
    • Bedtools: A flexible suite of utilities for comparing genomic features
    • Quinlan, A. R., and Hall, I. M. (2010) 'BEDTools: A Flexible Suite of Utilities for Comparing Genomic Features', Bioinformatics, 26: 841-2
    • (2010) Bioinformatics , vol.26 , pp. 841-842
    • Quinlan, A.R.1    Hall, I.M.2
  • 37
    • 74049139522 scopus 로고    scopus 로고
    • Phylogenetic analysis and temporal diversification of mosquitoes (diptera: Culicidae) based on nuclear genes and morphology
    • Reidenbach, K. R. et al. (2009) 'Phylogenetic Analysis and Temporal Diversification of Mosquitoes (Diptera: Culicidae) Based on Nuclear Genes and Morphology', BMC Evolutionary Biology, 9: 298
    • (2009) BMC Evolutionary Biology , vol.9 , pp. 298
    • Reidenbach, K.R.1
  • 38
    • 68149145588 scopus 로고    scopus 로고
    • Detection of novel insect flavivirus sequences integrated in aedes albopictus (diptera: Culicidae) in northern Italy
    • Roiz, D. et al. (2009) 'Detection of Novel Insect Flavivirus Sequences Integrated in Aedes albopictus (Diptera: Culicidae) in Northern Italy', Virology Journal, 6: 93
    • (2009) Virology Journal , vol.6 , pp. 93
    • Roiz, D.1
  • 40
    • 84892453041 scopus 로고    scopus 로고
    • Genome sequence of anopheles sinensis provides insight into genetics basis of mosquito competence for malaria parasites
    • Zhou, D. et al. (2014) 'Genome Sequence of Anopheles sinensis Provides Insight into Genetics Basis of Mosquito Competence for Malaria Parasites', BMC Genomics, 15
    • (2014) BMC Genomics , vol.15
    • Zhou, D.1
  • 41
    • 84892992415 scopus 로고    scopus 로고
    • Detection of quang binh virus frommosquitoes in China
    • Zuo, S. et al. (2014) 'Detection of Quang Binh Virus frommosquitoes in China', Virus Research, 180: 31-8
    • (2014) Virus Research , vol.180 , pp. 31-38
    • Zuo, S.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.