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Volumn 1, Issue 2, 2017, Pages

Experimental test and refutation of a classic case of molecular adaptation in Drosophila melanogaster

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EID: 85019671605     PISSN: None     EISSN: 2397334X     Source Type: Journal    
DOI: 10.1038/s41559-016-0025     Document Type: Article
Times cited : (24)

References (49)
  • 1
    • 35349012592 scopus 로고    scopus 로고
    • Genome-wide detection and characterization of positive selection in human populations
    • Sabeti, P. C. et al. Genome-wide detection and characterization of positive selection in human populations. Nature 449, 913-918 (2007).
    • (2007) Nature , vol.449 , pp. 913-918
    • Sabeti, P.C.1
  • 2
    • 84951286136 scopus 로고    scopus 로고
    • Genome-wide patterns of selection in 230 ancient Eurasians
    • Mathieson, I. et al. Genome-wide patterns of selection in 230 ancient Eurasians. Nature 528, 499-503 (2015).
    • (2015) Nature , vol.528 , pp. 499-503
    • Mathieson, I.1
  • 3
    • 84900301308 scopus 로고    scopus 로고
    • Population genomics reveal recent speciation and rapid evolutionary adaptation in polar bears
    • Liu, S. et al. Population genomics reveal recent speciation and rapid evolutionary adaptation in polar bears. Cell 157, 785-794 (2014).
    • (2014) Cell , vol.157 , pp. 785-794
    • Liu, S.1
  • 4
    • 77952698523 scopus 로고    scopus 로고
    • Adaptive evolution of energy metabolism genes and the origin of flight in bats
    • Shen, Y.-Y. et al. Adaptive evolution of energy metabolism genes and the origin of flight in bats. Proc. Natl Acad. Sci. USA 107, 8666-8671 (2010).
    • (2010) Proc. Natl Acad. Sci. USA , vol.107 , pp. 8666-8671
    • Shen, Y.-Y.1
  • 5
    • 84155170973 scopus 로고    scopus 로고
    • Joint analysis of demography and selection in population genetics: Where do we stand and where could we go? Mol
    • Li, J. et al. Joint analysis of demography and selection in population genetics: where do we stand and where could we go? Mol. Ecol. 21, 28-44 (2012).
    • (2012) Ecol. , vol.21 , pp. 28-44
    • Li, J.1
  • 6
    • 77956407766 scopus 로고    scopus 로고
    • Integrating evolutionary and functional approaches to infer adaptation at specific loci
    • Storz, J. F. & Wheat, C. W. Integrating evolutionary and functional approaches to infer adaptation at specific loci. Evolution 64, 2489-2509 (2010).
    • (2010) Evolution , vol.64 , pp. 2489-2509
    • Storz, J.F.1    Wheat, C.W.2
  • 7
    • 80054759105 scopus 로고    scopus 로고
    • Molecular spandrels: Tests of adaptation at the genetic level
    • Barrett, R. D. H. & Hoekstra, H. E. Molecular spandrels: tests of adaptation at the genetic level. Nat. Rev. Genet. 12, 767-780 (2011).
    • (2011) Nat. Rev. Genet. , vol.12 , pp. 767-780
    • Barrett, R.D.H.1    Hoekstra, H.E.2
  • 8
    • 0026040910 scopus 로고
    • Twenty-five years ago in genetics: Electrophoresis in the development of evolutionary genetics: Milestone or millstone
    • Lewontin, R. C. Twenty-five years ago in genetics: electrophoresis in the development of evolutionary genetics: milestone or millstone? Genetics 128, 657 (1991).
    • (1991) Genetics , vol.128 , pp. 657
    • Lewontin, R.C.1
  • 10
    • 0000015102 scopus 로고
    • eds Berry, R J. et al. Blackwell Scientific
    • Feder, M. E. & Watt, W. B. in Genes in Ecology (eds Berry, R. J. et al.) 365-392 (Blackwell Scientific, 1992).
    • (1992) Genes in Ecology , pp. 365-392
    • Feder, M.E.1    Watt, W.B.2
  • 11
    • 70149102931 scopus 로고    scopus 로고
    • Evolutionary and functional insights into the mechanism underlying high-altitude adaptation of deer mouse hemoglobin
    • Storz, J. F. et al. Evolutionary and functional insights into the mechanism underlying high-altitude adaptation of deer mouse hemoglobin. Proc. Natl Acad. Sci. USA 106, 14450-14455 (2009).
    • (2009) Proc. Natl Acad. Sci. USA , vol.106 , pp. 14450-14455
    • Storz, J.F.1
  • 12
    • 84865544969 scopus 로고    scopus 로고
    • A gain-of-function polymorphism controlling complex traits and fitness in nature
    • Prasad, K. V. S. K. et al. A gain-of-function polymorphism controlling complex traits and fitness in nature. Science 337, 1081-1084 (2012).
    • (2012) Science , vol.337 , pp. 1081-1084
    • Prasad, K.V.S.K.1
  • 13
    • 33845900450 scopus 로고    scopus 로고
    • Convergent adaptation of human lactase persistence in Africa and Europe
    • Tishkoff, S. A. et al. Convergent adaptation of human lactase persistence in Africa and Europe. Nat. Genet. 39, 31-40 (2007).
    • (2007) Nat. Genet. , vol.39 , pp. 31-40
    • Tishkoff, S.A.1
  • 14
    • 84874963219 scopus 로고    scopus 로고
    • Adaptive evolution of multiple traits through multiple mutations at a single gene
    • Linnen, C. R. et al. Adaptive evolution of multiple traits through multiple mutations at a single gene. Science 339, 1312-1316 (2013).
    • (2013) Science , vol.339 , pp. 1312-1316
    • Linnen, C.R.1
  • 15
    • 74549118236 scopus 로고    scopus 로고
    • Adaptive evolution of pelvic reduction in sticklebacks by recurrent deletion of a Pitx1 enhancer
    • Chan, Y. F. et al. Adaptive evolution of pelvic reduction in sticklebacks by recurrent deletion of a Pitx1 enhancer. Science 327, 302-305 (2010).
    • (2010) Science , vol.327 , pp. 302-305
    • Chan, Y.F.1
  • 16
    • 84910657559 scopus 로고    scopus 로고
    • Integrating evolutionary and functional tests of adaptive hypotheses: A case study of altitudinal differentiation in hemoglobin function in an Andean sparrow, Zonotrichia capensis
    • Cheviron, Z. A. et al. Integrating evolutionary and functional tests of adaptive hypotheses: a case study of altitudinal differentiation in hemoglobin function in an Andean sparrow, Zonotrichia capensis. Mol. Biol. Evol. 31, 2948-2962 (2014).
    • (2014) Mol. Biol. Evol. , vol.31 , pp. 2948-2962
    • Cheviron, Z.A.1
  • 17
    • 77955584075 scopus 로고    scopus 로고
    • Analyzing protein structure and function using ancestral gene reconstruction
    • Harms, M. J. & Thornton, J. W. Analyzing protein structure and function using ancestral gene reconstruction. Curr. Opin. Struct. Biol. 20, 360-366 (2010).
    • (2010) Curr. Opin. Struct. Biol. , vol.20 , pp. 360-366
    • Harms, M.J.1    Thornton, J.W.2
  • 18
    • 0023768584 scopus 로고
    • Kinetics and thermodynamics of ethanol oxidation catalyzed by genetic variants of the alcohol dehydrogenase from Drosophila melanogaster and D
    • Heinstra, P. W., Thörig, G. E., Scharloo, W., Drenth, W. & Nolte, R. J. Kinetics and thermodynamics of ethanol oxidation catalyzed by genetic variants of the alcohol dehydrogenase from Drosophila melanogaster and D. simulans. Biochim. Biophys. Acta 967, 224-233 (1988).
    • (1988) Simulans. Biochim. Biophys. Acta , vol.967 , pp. 224-233
    • Heinstra, P.W.1    Thörig, G.E.2    Scharloo, W.3    Drenth, W.4    Nolte, R.J.5
  • 24
    • 0027134164 scopus 로고
    • Evolutionary genetics of the Drosophila alcohol dehydrogenase gene-enzyme system
    • Heinstra, P. W. H. Evolutionary genetics of the Drosophila alcohol dehydrogenase gene-enzyme system. Genetica 92, 1-22 (1993).
    • (1993) Genetica , vol.92 , pp. 1-22
    • Heinstra, P.W.H.1
  • 25
    • 0001599478 scopus 로고
    • Alcohol tolerance: An ecological parameter in the relative success of Drosophila melanogaster and Drosophila simulans
    • McKenzie, J. A. & Parsons, P. A. Alcohol tolerance: an ecological parameter in the relative success of Drosophila melanogaster and Drosophila simulans. Oecologia 10, 373-388 (1972).
    • (1972) Oecologia , vol.10 , pp. 373-388
    • McKenzie, J.A.1    Parsons, P.A.2
  • 26
    • 0017087032 scopus 로고
    • Evidence for the adaptive significance of enzyme activity levels: Interspecific variation in ?-GPDH and ADH in Drosophila
    • McDonald, J. F. & Avise, J. C. Evidence for the adaptive significance of enzyme activity levels: interspecific variation in ?-GPDH and ADH in Drosophila. Biochem. Genet. 14, 347-355 (1976).
    • (1976) Biochem. Genet. , vol.14 , pp. 347-355
    • McDonald, J.F.1    Avise, J.C.2
  • 27
    • 0023404199 scopus 로고
    • Physiological significance of the alcohol dehydrogenase polymorphism in larvae of Drosophila
    • Heinstra, P. W. H., Scharloo, W. & Thorig, G. E. W. Physiological significance of the alcohol dehydrogenase polymorphism in larvae of Drosophila. Genetics 117, 75-84 (1987).
    • (1987) Genetics , vol.117 , pp. 75-84
    • Heinstra, P.W.H.1    Scharloo, W.2    Thorig, G.E.W.3
  • 28
    • 0026428610 scopus 로고
    • Adaptive protein evolution at the Adh locus in Drosophila
    • McDonald, J. H. & Kreitman, M. Adaptive protein evolution at the Adh locus in Drosophila. Nature 351, 652-654 (1991).
    • (1991) Nature , vol.351 , pp. 652-654
    • McDonald, J.H.1    Kreitman, M.2
  • 31
    • 84966148444 scopus 로고
    • Regulatory gene evolution: Adaptive differences in expression of alcohol dehydrogenase in Drosophila melanogaster and Drosophila simulans
    • Dickinson, W. J., Rowan, R. G. & Brennan, M. D. Regulatory gene evolution: adaptive differences in expression of alcohol dehydrogenase in Drosophila melanogaster and Drosophila simulans. Heredity 52, 215-225 (1984).
    • (1984) Heredity , vol.52 , pp. 215-225
    • Dickinson, W.J.1    Rowan, R.G.2    Brennan, M.D.3
  • 32
    • 0025695079 scopus 로고
    • Genetic basis of the difference in alcohol dehydrogenase expression between Drosophila melanogaster and Drosophila simulans
    • Laurie, C. C., Heath, E. M., Jacobson, J. W. & Thomson, M. S. Genetic basis of the difference in alcohol dehydrogenase expression between Drosophila melanogaster and Drosophila simulans. Proc. Natl Acad. Sci. USA 87, 9674-9678 (1990).
    • (1990) Proc. Natl Acad. Sci. USA , vol.87 , pp. 9674-9678
    • Laurie, C.C.1    Heath, E.M.2    Jacobson, J.W.3    Thomson, M.S.4
  • 33
    • 0025966048 scopus 로고
    • Comparison of alcohol dehydrogenase expression in Drosophila melanogaster and Drosophila simulans
    • Thomson, M. S., Jacobson, J. W. & Laurie, C. C. Comparison of alcohol dehydrogenase expression in Drosophila melanogaster and Drosophila simulans. Mol. Biol. Evol. 8, 31-48 (1991).
    • (1991) Mol. Biol. Evol. , vol.8 , pp. 31-48
    • Thomson, M.S.1    Jacobson, J.W.2    Laurie, C.C.3
  • 34
    • 33750589189 scopus 로고    scopus 로고
    • Membrane lipid physiology and toxin catabolism underlie ethanol and acetic acid tolerance in Drosophila melanogaster
    • Montooth, K. L., Siebenthall, K. T. & Clark, A. G. Membrane lipid physiology and toxin catabolism underlie ethanol and acetic acid tolerance in Drosophila melanogaster. J. Exp. Biol. 209, 3837-3850 (2006).
    • (2006) J. Exp. Biol. , vol.209 , pp. 3837-3850
    • Montooth, K.L.1    Siebenthall, K.T.2    Clark, A.G.3
  • 35
    • 84862680694 scopus 로고    scopus 로고
    • Drosophila melanogaster as a model to study drug addiction
    • Kaun, K. R., Devineni, A. V. & Heberlein, U. Drosophila melanogaster as a model to study drug addiction. Hum. Genet. 131, 959-975 (2012).
    • (2012) Hum. Genet. , vol.131 , pp. 959-975
    • Kaun, K.R.1    Devineni, A.V.2    Heberlein, U.3
  • 36
    • 84924798717 scopus 로고    scopus 로고
    • Mechanisms of naturally evolved ethanol resistance in Drosophila melanogaster
    • Fry, J. D. Mechanisms of naturally evolved ethanol resistance in Drosophila melanogaster. J. Exp. Biol. 217, 3996-4003 (2014).
    • (2014) J. Exp. Biol. , vol.217 , pp. 3996-4003
    • Fry, J.D.1
  • 37
    • 8544270088 scopus 로고    scopus 로고
    • Single-locus latitudinal clines and their relationship to temperate adaptation in metabolic genes and derived alleles in Drosophila melanogaster
    • Sezgin, E. et al. Single-locus latitudinal clines and their relationship to temperate adaptation in metabolic genes and derived alleles in Drosophila melanogaster. Genetics 168, 923-931 (2004).
    • (2004) Genetics , vol.168 , pp. 923-931
    • Sezgin, E.1
  • 38
    • 17844398742 scopus 로고    scopus 로고
    • A rapid shift in a classic clinal pattern in Drosophila reflecting climate change
    • Umina, P. A., Weeks, A. R., Kearney, M. R., McKechnie, S. W. & Hoffmann, A. A. A rapid shift in a classic clinal pattern in Drosophila reflecting climate change. Science 308, 691-693 (2005).
    • (2005) Science , vol.308 , pp. 691-693
    • Umina, P.A.1    Weeks, A.R.2    Kearney, M.R.3    McKechnie, S.W.4    Hoffmann, A.A.5
  • 39
    • 0028031431 scopus 로고
    • The effect of an intronic polymorphism on alcohol dehydrogenase expression in Drosophila melanogaster
    • Laurie, C. C. & Stam, L. F. The effect of an intronic polymorphism on alcohol dehydrogenase expression in Drosophila melanogaster. Genetics 138, 379-385 (1994).
    • (1994) Genetics , vol.138 , pp. 379-385
    • Laurie, C.C.1    Stam, L.F.2
  • 40
    • 0032731663 scopus 로고    scopus 로고
    • Is the fast/slow allozyme variation at the Adh locus of Drosophila melanogaster an ancient balanced polymorphism? Mol
    • Begun, D. J., Betancourt, A. J., Langley, C. H. & Stephan, W. Is the fast/slow allozyme variation at the Adh locus of Drosophila melanogaster an ancient balanced polymorphism? Mol. Biol. Evol. 16, 1816-1819 (1999).
    • (1999) Biol. Evol. , vol.16 , pp. 1816-1819
    • Begun, D.J.1    Betancourt, A.J.2    Langley, C.H.3    Stephan, W.4
  • 41
    • 0027221528 scopus 로고
    • Molecular analysis of an allozyme cline: Alcohol dehydrogenase in Drosophila melanogaster on the east coast of North America
    • Berry, A. & Kreitman, M. Molecular analysis of an allozyme cline: alcohol dehydrogenase in Drosophila melanogaster on the east coast of North America. Genetics 134, 869-893 (1993).
    • (1993) Genetics , vol.134 , pp. 869-893
    • Berry, A.1    Kreitman, M.2
  • 42
    • 84872014607 scopus 로고    scopus 로고
    • Population genomics of sub-Saharan Drosophila melanogaster: African diversity and non-African admixture
    • Pool, J. E. et al. Population genomics of sub-Saharan Drosophila melanogaster: African diversity and non-African admixture. PLoS Genet. 8, e1003080 (2012).
    • (2012) PLoS Genet. , vol.8 , pp. e1003080
    • Pool, J.E.1
  • 43
    • 84970548691 scopus 로고
    • Ethanol utilization: Threshold differences among six closely related species of Drosophila
    • Parsons, P. A. Ethanol utilization: threshold differences among six closely related species of Drosophila. Aust. J. Zool. 28, 535-541 (1980).
    • (1980) Aust. J. Zool. , vol.28 , pp. 535-541
    • Parsons, P.A.1
  • 44
    • 0030453209 scopus 로고    scopus 로고
    • Molecular dissection of a major gene effect on a quantitative trait: The level of alcohol dehydrogenase expression in Drosophila melanogaster
    • Stam, L. F. & Laurie, C. C. Molecular dissection of a major gene effect on a quantitative trait: the level of alcohol dehydrogenase expression in Drosophila melanogaster. Genetics 144, 1559-1564 (1996).
    • (1996) Genetics , vol.144 , pp. 1559-1564
    • Stam, L.F.1    Laurie, C.C.2
  • 45
    • 0023339852 scopus 로고
    • A test of neutral molecular evolution based on nucleotide data
    • Hudson, R. R., Kreitman, M. & Aguadé, M. A test of neutral molecular evolution based on nucleotide data. Genetics 116, 153-159 (1987).
    • (1987) Genetics , vol.116 , pp. 153-159
    • Hudson, R.R.1    Kreitman, M.2    Aguadé, M.3
  • 46
    • 0002068215 scopus 로고
    • Alcohol dehydrogenase and glycerol-3-phosphate dehydrogenase clines in Drosophila melanogaster on different continents
    • Oakeshott, J. G. et al. Alcohol dehydrogenase and glycerol-3-phosphate dehydrogenase clines in Drosophila melanogaster on different continents. Evolution 36, 86-96 (1982).
    • (1982) Evolution , vol.36 , pp. 86-96
    • Oakeshott, J.G.1
  • 47
    • 0028820333 scopus 로고
    • A new method of inference of ancestral nucleotide and amino acid sequences
    • Yang, Z., Kumar, S. & Nei, M. A new method of inference of ancestral nucleotide and amino acid sequences. Genetics 141, 1641-1650 (1995).
    • (1995) Genetics , vol.141 , pp. 1641-1650
    • Yang, Z.1    Kumar, S.2    Nei, M.3
  • 48
    • 84969801860 scopus 로고    scopus 로고
    • Expression of tandem gene duplicates is often greater than twofold
    • Loehlin, D. W. & Carroll, S. B. Expression of tandem gene duplicates is often greater than twofold. Proc. Natl Acad. Sci. USA 113, 5988-5992 (2016).
    • (2016) Proc. Natl Acad. Sci. USA , vol.113 , pp. 5988-5992
    • Loehlin, D.W.1    Carroll, S.B.2
  • 49
    • 0036961560 scopus 로고    scopus 로고
    • Changing effective population size and the McDonald-Kreitman test
    • Eyre-Walker, A. Changing effective population size and the McDonald-Kreitman test. Genetics 162, 2017-2024 (2002).
    • (2002) Genetics , vol.162 , pp. 2017-2024
    • Eyre-Walker, A.1


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