Genome-wide identification of the Phaseolus vulgaris sRNAome using small RNA and degradome sequencing

BMC Genomics

Volumn 16, Issue 1, 2015, Pages

  Formey, Damien ^a   Iñiguez, Luis Pedro ^a   Peláez, Pablo ^b   Li, Yong Fang ^c   Sunkar, Ramanjulu ^c   Sánchez, Federico ^b   Reyes, José Luis ^b   Hernández, Georgina ^a  

^a INSTITUTO DE CIENCIAS FÍSICAS   (Mexico)

^b INSTITUTO DE BIOTECNOLOGÍA   (Mexico)

^c OKLAHOMA STATE UNIVERSITY   (United States)

Author keywords

Common bean; Degradome; Legumes; microRNAs; Nodules; Phaseolus vulgaris; phasiRNAs

Indexed keywords

DEGRADOME; MICRORNA; PHASED SMALL INTERFERING RNA; SMALL INTERFERING RNA; SRNAOME; TRANSCRIPTOME; UNCLASSIFIED DRUG; PLANT PROTEIN; PLANT RNA;

3' UNTRANSLATED REGION; 5' UNTRANSLATED REGION; ARTICLE; BIOINFORMATICS; CONTROLLED STUDY; DEGRADOME SEQUENCE; EXON; GENE AMPLIFICATION; GENE IDENTIFICATION; GENE LOCATION; GENE LOCUS; GENE MAPPING; GENE REGULATORY NETWORK; GENE TARGETING; GENETIC ANALYSIS; GENETIC ASSOCIATION; GENETIC CONSERVATION; HIGH THROUGHPUT SEQUENCING; INTRON; NODULATION; NONHUMAN; PHASEOLUS VULGARIS; RNA SEQUENCE; SPECIES DISTRIBUTION; TRANSCRIPTION REGULATION; CONSERVED SEQUENCE; GENE EXPRESSION REGULATION; GENETIC DATABASE; GENETICS; METABOLISM; PHASEOLUS; PHYLOGENY; PROCEDURES; SEQUENCE ANALYSIS;

PHASEOLUS VULGARIS;

CONSERVED SEQUENCE; DATABASES, GENETIC; GENE EXPRESSION REGULATION, PLANT; GENE REGULATORY NETWORKS; MICRORNAS; PHASEOLUS; PHYLOGENY; PLANT PROTEINS; RNA, PLANT; RNA, SMALL INTERFERING; SEQUENCE ANALYSIS, RNA;

EID: 85019254817     PISSN: None     EISSN: 14712164     Source Type: Journal    
DOI: 10.1186/s12864-015-1639-5     Document Type: Article

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