-
1
-
-
0018848920
-
3-Terminal and 5-Terminal sequences of influenza-A, influenza-B and influenza-C virus-RNA segments are highly conserved and show partial inverted complementarity
-
Desselberger, U., Racaniello, V.R., Zazra, J.J. and Palese, P. (1980) 3-Terminal and 5-Terminal sequences of influenza-A, influenza-B and influenza-C virus-RNA segments are highly conserved and show partial inverted complementarity. Gene, 8, 315-328.
-
(1980)
Gene
, vol.8
, pp. 315-328
-
-
Desselberger, U.1
Racaniello, V.R.2
Zazra, J.J.3
Palese, P.4
-
2
-
-
0018674114
-
5 and 3 terminal nucleotide-sequences of the RNA genome segments of influenza-virus
-
Robertson, J.S. (1979) 5 and 3 terminal nucleotide-sequences of the RNA genome segments of influenza-virus. Nucleic Acids Res., 6, 3745-3757.
-
(1979)
Nucleic Acids Res
, vol.6
, pp. 3745-3757
-
-
Robertson, J.S.1
-
3
-
-
84880367286
-
The RNA polymerase of influenza a virus: Mechanisms of viral transcription and replication
-
Fodor, E. (2013) The RNA polymerase of influenza a virus: mechanisms of viral transcription and replication. Acta Virol., 57, 113-122.
-
(2013)
Acta Virol
, vol.57
, pp. 113-122
-
-
Fodor, E.1
-
4
-
-
84922257981
-
Structure of influenza A polymerase bound to the viral RNA promoter
-
Pflug, A., Guilligay, D., Reich, S. and Cusack, S. (2014) Structure of influenza A polymerase bound to the viral RNA promoter. Nature, 516, 355-360.
-
(2014)
Nature
, vol.516
, pp. 355-360
-
-
Pflug, A.1
Guilligay, D.2
Reich, S.3
Cusack, S.4
-
5
-
-
84922245983
-
Structural insight into cap-snatching and RNA synthesis by influenza polymerase
-
Reich, S., Guilligay, D., Pflug, A., Malet, H., Berger, I., Crepin, T., Hart, D., Lunardi, T., Nanao, M., Ruigrok, R.W. et al. (2014) Structural insight into cap-snatching and RNA synthesis by influenza polymerase. Nature, 516, 361-366.
-
(2014)
Nature
, vol.516
, pp. 361-366
-
-
Reich, S.1
Guilligay, D.2
Pflug, A.3
Malet, H.4
Berger, I.5
Crepin, T.6
Hart, D.7
Lunardi, T.8
Nanao, M.9
Ruigrok, R.W.10
-
6
-
-
84953403658
-
Influenza polymerase can adopt an alternative configuration involving a radical repacking of PB2 domains
-
Thierry, E., Guilligay, D., Kosinski, J., Bock, T., Gaudon, S., Round, A., Pflug, A., Hengrung, N., El Omari, K., Baudin, F. et al. (2016) Influenza polymerase can adopt an alternative configuration involving a radical repacking of PB2 domains. Mol. Cell, 61, 125-137.
-
(2016)
Mol. Cell
, vol.61
, pp. 125-137
-
-
Thierry, E.1
Guilligay, D.2
Kosinski, J.3
Bock, T.4
Gaudon, S.5
Round, A.6
Pflug, A.7
Hengrung, N.8
El Omari, K.9
Baudin, F.10
-
7
-
-
84946227752
-
Crystal structure of the RNA-dependent RNA polymerase from influenza C virus
-
Hengrung, N., El Omari, K., Serna Martin, I., Vreede, F.T., Cusack, S., Rambo, R.P., Vonrhein, C., Bricogne, G., Stuart, D.I., Grimes, J.M. et al. (2015) Crystal structure of the RNA-dependent RNA polymerase from influenza C virus. Nature, 527, 114-117.
-
(2015)
Nature
, vol.527
, pp. 114-117
-
-
Hengrung, N.1
El Omari, K.2
Serna Martin, I.3
Vreede, F.T.4
Cusack, S.5
Rambo, R.P.6
Vonrhein, C.7
Bricogne, G.8
Stuart, D.I.9
Grimes, J.M.10
-
8
-
-
2642558647
-
Mutational analysis of the influenza virus cRNA promoter and identification of nucleotides critical for replication
-
Crow, M., Deng, T., Addley, M. and Brownlee, G.G. (2004) Mutational analysis of the influenza virus cRNA promoter and identification of nucleotides critical for replication. J. Virol., 78, 6263-6270.
-
(2004)
J. Virol
, vol.78
, pp. 6263-6270
-
-
Crow, M.1
Deng, T.2
Addley, M.3
Brownlee, G.G.4
-
9
-
-
0029150892
-
In-vitro transcription and polymerase binding-studies of the termini of influenza-A virus Crna-evidence for a Crna panhandle
-
Pritlove, D.C., Fodor, E., Seong, B.L. and Brownlee, G.G. (1995) In-vitro transcription and polymerase binding-studies of the termini of influenza-A virus Crna-evidence for a Crna panhandle. J. Gen. Virol., 76, 2205-2213.
-
(1995)
J. Gen. Virol
, vol.76
, pp. 2205-2213
-
-
Pritlove, D.C.1
Fodor, E.2
Seong, B.L.3
Brownlee, G.G.4
-
10
-
-
84905974849
-
Single-molecule FRET reveals a corkscrew RNA structure for the polymerase-bound influenza virus promoter
-
Tomescu, A.I., Robb, N.C., Hengrung, N., Fodor, E. and Kapanidis, A.N. (2014) Single-molecule FRET reveals a corkscrew RNA structure for the polymerase-bound influenza virus promoter. Proc. Natl. Acad. Sci. U.S.A., 111, E3335-E3342.
-
(2014)
Proc. Natl. Acad. Sci. U.S.A
, vol.111
, pp. E3335-E3342
-
-
Tomescu, A.I.1
Robb, N.C.2
Hengrung, N.3
Fodor, E.4
Kapanidis, A.N.5
-
11
-
-
78049249486
-
Sensing DNA opening in transcription using quenchable Forster resonance energy transfer
-
Cordes, T., Santoso, Y., Tomescu, A.I., Gryte, K., Hwang, L.C., Camara, B., Wigneshweraraj, S. and Kapanidis, A.N. (2010) Sensing DNA opening in transcription using quenchable Forster resonance energy transfer. Biochemistry, 49, 9171-9180.
-
(2010)
Biochemistry
, vol.49
, pp. 9171-9180
-
-
Cordes, T.1
Santoso, Y.2
Tomescu, A.I.3
Gryte, K.4
Hwang, L.C.5
Camara, B.6
Wigneshweraraj, S.7
Kapanidis, A.N.8
-
12
-
-
84856690548
-
MultiBac: Expanding the research toolbox for multiprotein complexes
-
Bieniossek, C., Imasaki, T., Takagi, Y. and Berger, I. (2012) MultiBac: expanding the research toolbox for multiprotein complexes. Trends Biochem. Sci., 37, 49-57.
-
(2012)
Trends Biochem. Sci
, vol.37
, pp. 49-57
-
-
Bieniossek, C.1
Imasaki, T.2
Takagi, Y.3
Berger, I.4
-
13
-
-
84887265188
-
Isolation and characterization of the positive-sense replicative intermediate of a negative-strand RNA virus
-
York, A., Hengrung, N., Vreede, F.T., Huiskonen, J.T. and Fodor, E. (2013) Isolation and characterization of the positive-sense replicative intermediate of a negative-strand RNA virus. Proc. Natl. Acad. Sci. U.S.A., 110, E4238-E4245.
-
(2013)
Proc. Natl. Acad. Sci. U.S.A
, vol.110
, pp. E4238-E4245
-
-
York, A.1
Hengrung, N.2
Vreede, F.T.3
Huiskonen, J.T.4
Fodor, E.5
-
14
-
-
85010686232
-
The role of the priming loop in influenza A virus RNA synthesis
-
te Velthuis, A.J.W., Robb, N.C., Kapanidis, A.N. and Fodor, E. (2016) The role of the priming loop in influenza A virus RNA synthesis. Nat. Microbiol., 16029.
-
(2016)
Nat. Microbiol
, pp. 16029
-
-
Te Velthuis, A.J.W.1
Robb, N.C.2
Kapanidis, A.N.3
Fodor, E.4
-
15
-
-
76249127905
-
Conformational transitions in DNA polymerase i revealed by single-molecule FRET
-
Santoso, Y., Joyce, C.M., Potapova, O., Le Reste, L., Hohlbein, J., Torella, J.P., Grindley, N.D. and Kapanidis, A.N. (2010) Conformational transitions in DNA polymerase I revealed by single-molecule FRET. Proc. Natl. Acad. Sci. U.S.A., 107, 715-720.
-
(2010)
Proc. Natl. Acad. Sci. U.S.A
, vol.107
, pp. 715-720
-
-
Santoso, Y.1
Joyce, C.M.2
Potapova, O.3
Le Reste, L.4
Hohlbein, J.5
Torella, J.P.6
Grindley, N.D.7
Kapanidis, A.N.8
-
16
-
-
77954785228
-
Characterizing single-molecule FRET dynamics with probability distribution analysis
-
Santoso, Y., Torella, J.P. and Kapanidis, A.N. (2010) Characterizing single-molecule FRET dynamics with probability distribution analysis. Chemphyschem, 11, 2209-2219.
-
(2010)
Chemphyschem
, vol.11
, pp. 2209-2219
-
-
Santoso, Y.1
Torella, J.P.2
Kapanidis, A.N.3
-
17
-
-
84874113188
-
The transcription bubble of the RNA polymerase-promoter open complex exhibits conformational heterogeneity and millisecond-scale dynamics: Implications for transcription start-site selection
-
Robb, N.C., Cordes, T., Hwang, L.C., Gryte, K., Duchi, D., Craggs, T.D., Santoso, Y., Weiss, S., Ebright, R.H. and Kapanidis, A.N. (2013) The transcription bubble of the RNA polymerase-promoter open complex exhibits conformational heterogeneity and millisecond-scale dynamics: implications for transcription start-site selection. J. Mol. Biol., 425, 875-885.
-
(2013)
J. Mol. Biol
, vol.425
, pp. 875-885
-
-
Robb, N.C.1
Cordes, T.2
Hwang, L.C.3
Gryte, K.4
Duchi, D.5
Craggs, T.D.6
Santoso, Y.7
Weiss, S.8
Ebright, R.H.9
Kapanidis, A.N.10
-
18
-
-
23744455796
-
Alternating-laser excitation of single molecules
-
Kapanidis, A.N., Laurence, T.A., Lee, N.K., Margeat, E., Kong, X. and Weiss, S. (2005) Alternating-laser excitation of single molecules. Acc. Chem. Res., 38, 523-533.
-
(2005)
Acc. Chem. Res
, vol.38
, pp. 523-533
-
-
Kapanidis, A.N.1
Laurence, T.A.2
Lee, N.K.3
Margeat, E.4
Kong, X.5
Weiss, S.6
-
19
-
-
2942650138
-
Fluorescence-Aided molecule sorting: Analysis of structure and interactions by alternating-laser excitation of single molecules
-
Kapanidis, A.N., Lee, N.K., Laurence, T.A., Doose, S., Margeat, E. and Weiss, S. (2004) Fluorescence-Aided molecule sorting: Analysis of structure and interactions by alternating-laser excitation of single molecules. Proc. Natl. Acad. Sci. U.S.A., 101, 8936-8941.
-
(2004)
Proc. Natl. Acad. Sci. U.S.A
, vol.101
, pp. 8936-8941
-
-
Kapanidis, A.N.1
Lee, N.K.2
Laurence, T.A.3
Doose, S.4
Margeat, E.5
Weiss, S.6
-
20
-
-
77949447172
-
RNAstructure: Software for RNA secondary structure prediction and analysis
-
Reuter, J.S. and Mathews, D.H. (2010) RNAstructure: software for RNA secondary structure prediction and analysis. BMC Bioinformatics, 11, 129.
-
(2010)
BMC Bioinformatics
, vol.11
, pp. 129
-
-
Reuter, J.S.1
Mathews, D.H.2
-
21
-
-
77955405123
-
Assemble: An interactive graphical tool to analyze and build RNA architectures at the 2D and 3D levels
-
Jossinet, F., Ludwig, T.E. and Westhof, E. (2010) Assemble: An interactive graphical tool to analyze and build RNA architectures at the 2D and 3D levels. Bioinformatics, 26, 2057-2059.
-
(2010)
Bioinformatics
, vol.26
, pp. 2057-2059
-
-
Jossinet, F.1
Ludwig, T.E.2
Westhof, E.3
-
22
-
-
84870852782
-
A toolkit and benchmark study for FRET-restrained high-precision structural modeling
-
Kalinin, S., Peulen, T., Sindbert, S., Rothwell, P.J., Berger, S., Restle, T., Goody, R.S., Gohlke, H. and Seidel, C.A. (2012) A toolkit and benchmark study for FRET-restrained high-precision structural modeling. Nat. Methods, 9, 1218-1225.
-
(2012)
Nat. Methods
, vol.9
, pp. 1218-1225
-
-
Kalinin, S.1
Peulen, T.2
Sindbert, S.3
Rothwell, P.J.4
Berger, S.5
Restle, T.6
Goody, R.S.7
Gohlke, H.8
Seidel, C.A.9
-
23
-
-
80054682639
-
Application of the nano-positioning system to the analysis of fluorescence resonance energy transfer networks
-
Muschielok, A. and Michaelis, J. (2011) Application of the nano-positioning system to the analysis of fluorescence resonance energy transfer networks. J. Phys. Chem. B, 115, 11927-11937.
-
(2011)
J. Phys. Chem. B
, vol.115
, pp. 11927-11937
-
-
Muschielok, A.1
Michaelis, J.2
-
24
-
-
0036720769
-
A single amino acid mutation in the PA subunit of the influenza virus RNA polymerase inhibits endonucleolytic cleavage of capped RNAs
-
Fodor, E., Crow, M., Mingay, L.J., Deng, T., Sharps, J., Fechter, P. and Brownlee, G.G. (2002) A single amino acid mutation in the PA subunit of the influenza virus RNA polymerase inhibits endonucleolytic cleavage of capped RNAs. J. Virol., 76, 8989-9001.
-
(2002)
J. Virol
, vol.76
, pp. 8989-9001
-
-
Fodor, E.1
Crow, M.2
Mingay, L.J.3
Deng, T.4
Sharps, J.5
Fechter, P.6
Brownlee, G.G.7
-
25
-
-
84880318919
-
Conformational landscapes of DNA polymerase i and mutator derivatives establish fidelity checkpoints for nucleotide insertion
-
Hohlbein, J., Aigrain, L., Craggs, T.D., Bermek, O., Potapova, O., Shoolizadeh, P., Grindley, N.D., Joyce, C.M. and Kapanidis, A.N. (2013) Conformational landscapes of DNA polymerase I and mutator derivatives establish fidelity checkpoints for nucleotide insertion. Nat. Commun., 4, 2131.
-
(2013)
Nat. Commun
, vol.4
, pp. 2131
-
-
Hohlbein, J.1
Aigrain, L.2
Craggs, T.D.3
Bermek, O.4
Potapova, O.5
Shoolizadeh, P.6
Grindley, N.D.7
Joyce, C.M.8
Kapanidis, A.N.9
-
26
-
-
77956642214
-
The Effect of dye-dye interactions on the spatial resolution of single-molecule FRET measurements in nucleic acids
-
Di Fiori, N. and Meller, A. (2010) The Effect of dye-dye interactions on the spatial resolution of single-molecule FRET measurements in nucleic acids. Biophys. J., 98, 2265-2272.
-
(2010)
Biophys. J
, vol.98
, pp. 2265-2272
-
-
Di Fiori, N.1
Meller, A.2
-
27
-
-
33644516580
-
Specific and stable fluorescence labeling of histidine-Tagged proteins for dissecting multi-protein complex formation
-
Lata, S., Gavutis, M., Tampe, R. and Piehler, J. (2006) Specific and stable fluorescence labeling of histidine-Tagged proteins for dissecting multi-protein complex formation. J. Am. Chem. Soc., 128, 2365-2372.
-
(2006)
J. Am. Chem. Soc
, vol.128
, pp. 2365-2372
-
-
Lata, S.1
Gavutis, M.2
Tampe, R.3
Piehler, J.4
-
28
-
-
0035814333
-
Site-specific incorporation of fluorescent probes into protein: Hexahistidine-Tag-mediated fluorescent labeling with (Ni(2+):nitrilotriacetic Acid (n)-fluorochrome conjugates
-
Kapanidis, A.N., Ebright, Y.W. and Ebright, R.H. (2001) Site-specific incorporation of fluorescent probes into protein: hexahistidine-Tag-mediated fluorescent labeling with (Ni(2+):nitrilotriacetic Acid (n)-fluorochrome conjugates. J. Am. Chem. Soc., 123, 12123-12125.
-
(2001)
J. Am. Chem. Soc
, vol.123
, pp. 12123-12125
-
-
Kapanidis, A.N.1
Ebright, Y.W.2
Ebright, R.H.3
-
29
-
-
84907938717
-
Live-cell targeting of his-Tagged proteins by multivalent N-nitrilotriacetic acid carrier complexes
-
Wieneke, R., Laboria, N., Rajan, M., Kollmannsperger, A., Natale, F., Cardoso, M.C. and Tampe, R. (2014) Live-cell targeting of his-Tagged proteins by multivalent N-nitrilotriacetic acid carrier complexes. J. Am. Chem. Soc., 136, 13975-13978.
-
(2014)
J. Am. Chem. Soc
, vol.136
, pp. 13975-13978
-
-
Wieneke, R.1
Laboria, N.2
Rajan, M.3
Kollmannsperger, A.4
Natale, F.5
Cardoso, M.C.6
Tampe, R.7
-
30
-
-
84939562439
-
SLAP: Small labeling pair for single-molecule super-resolution imaging
-
Wieneke, R., Raulf, A., Kollmannsperger, A., Heilemann, M. and Tampe, R. (2015) SLAP: Small labeling pair for single-molecule super-resolution imaging. Angew. Chem. Int. Ed. Engl., 54, 10216-10219.
-
(2015)
Angew. Chem. Int. Ed. Engl
, vol.54
, pp. 10216-10219
-
-
Wieneke, R.1
Raulf, A.2
Kollmannsperger, A.3
Heilemann, M.4
Tampe, R.5
-
31
-
-
67249108203
-
Genetic trans-complementation establishes a new model for influenza virus RNA transcription and replication
-
Jorba, N., Coloma, R. and Ortin, J. (2009) Genetic trans-complementation establishes a new model for influenza virus RNA transcription and replication. PLoS Pathog., 5.
-
(2009)
PLoS Pathog
, vol.5
-
-
Jorba, N.1
Coloma, R.2
Ortin, J.3
-
32
-
-
84871437653
-
Organization of the influenza virus replication machinery
-
Moeller, A., Kirchdoerfer, R.N., Potter, C.S., Carragher, B. and Wilson, I.A. (2012) Organization of the influenza virus replication machinery. Science, 338, 1631-1634.
-
(2012)
Science
, vol.338
, pp. 1631-1634
-
-
Moeller, A.1
Kirchdoerfer, R.N.2
Potter, C.S.3
Carragher, B.4
Wilson, I.A.5
-
33
-
-
0033169059
-
Distinct regions of influenza virus PB1 polymerase subunit recognize vRNA and cRNA templates
-
Gonzalez, S. and Ortin, J. (1999) Distinct regions of influenza virus PB1 polymerase subunit recognize vRNA and cRNA templates. EMBO J., 18, 3767-3775.
-
(1999)
EMBO J
, vol.18
, pp. 3767-3775
-
-
Gonzalez, S.1
Ortin, J.2
-
34
-
-
0032889312
-
Characterization of influenza virus PB1 protein binding to viral RNA: Two separate regions of the protein contribute to the interaction domain
-
Gonzalez, S. and Ortin, J. (1999) Characterization of influenza virus PB1 protein binding to viral RNA: Two separate regions of the protein contribute to the interaction domain. J. Virol., 73, 631-637.
-
(1999)
J. Virol
, vol.73
, pp. 631-637
-
-
Gonzalez, S.1
Ortin, J.2
|