-
1
-
-
84918815964
-
Cancer incidence and mortality worldwide: Sources, methods and major patterns in globocan 2012
-
Ferlay, J. et al. Cancer incidence and mortality worldwide: sources, methods and major patterns in GLOBOCAN 2012. Int J Cancer. 136, E359-86 (2015).
-
(2015)
Int J Cancer
, vol.136
, pp. 359-386
-
-
Ferlay, J.1
-
2
-
-
0000784774
-
Schistosomes, liver flukes and helicobacter pylori
-
International Agency for Research on Cancer
-
International Agency for Research on Cancer. Schistosomes, liver flukes and Helicobacter pylori. IARC Monogr Eval Carcinog Risks Hum. 61, 1-241 (1994).
-
(1994)
IARC Monogr Eval Carcinog Risks Hum
, vol.61
, pp. 1-241
-
-
-
3
-
-
0027065034
-
Human gastric carcinogenesis: A multistep and multifactorial process-first American cancer society award lecture on cancer epidemiology and prevention
-
Correa, P. Human gastric carcinogenesis: a multistep and multifactorial process-First American Cancer Society Award Lecture on Cancer Epidemiology and Prevention. Cancer Res. 52, 6735-40 (1992)
-
(1992)
Cancer Res.
, vol.52
, pp. 6735-6740
-
-
Correa, P.1
-
4
-
-
0035115434
-
Non-Helicobacter pylori bacterial flora during acid-suppressive therapy: Differential findings in gastric juice and gastric mucosa
-
Sanduleanu, S., Jonkers, D., De Bruine, A., Hameeteman, W. & Stockbrügger, R. W. Non-Helicobacter pylori bacterial flora during acid-suppressive therapy: differential findings in gastric juice and gastric mucosa. Aliment Pharmacol Ther. 15, 379-88 (2001).
-
(2001)
Aliment Pharmacol Ther.
, vol.15
, pp. 379-388
-
-
Sanduleanu, S.1
Jonkers, D.2
De Bruine, A.3
Hameeteman, W.4
Stockbrügger, R.W.5
-
5
-
-
71049159648
-
Bacterial microbiota profiling in gastritis without helicobacter pylori infection or non-steroidal anti-inflammatory drug use
-
Li, X. X. et al. Bacterial microbiota profiling in gastritis without Helicobacter pylori infection or non-steroidal anti-inflammatory drug use. PLoS One. 4, e7985 (2009).
-
(2009)
PLoS One
, vol.4
, pp. 7985
-
-
Li, X.X.1
-
6
-
-
31444449652
-
Molecular analysis of the bacterial microbiota in the human stomach
-
Bik, E. M. et al. Molecular analysis of the bacterial microbiota in the human stomach. Proc Natl Acad Sci USA 103, 732-7 (2006).
-
(2006)
Proc Natl Acad Sci USA
, vol.103
, pp. 732-737
-
-
Bik, E.M.1
-
7
-
-
65649150743
-
Molecular characterization of the stomach microbiota in patients with gastric cancer and in controls
-
Dicksved, J. et al. Molecular characterization of the stomach microbiota in patients with gastric cancer and in controls. J Med Microbiol. 58, 509-16 (2009).
-
(2009)
J Med Microbiol
, vol.58
, pp. 509-516
-
-
Dicksved, J.1
-
8
-
-
84894729136
-
Stomach microbiota composition varies between patients with non-atrophic gastritis and patients with intestinal type of gastric cancer
-
Aviles-Jimenez, F. et al. Stomach microbiota composition varies between patients with non-atrophic gastritis and patients with intestinal type of gastric cancer. Sci Rep. 4, 4202 (2014).
-
(2014)
Sci Rep.
, vol.4
, pp. 4202
-
-
Aviles-Jimenez, F.1
-
9
-
-
84899721634
-
Association between upper digestive tract microbiota and cancer-predisposing states in the esophagus and stomach
-
Yu, G. et al. Association between upper digestive tract microbiota and cancer-predisposing states in the esophagus and stomach. Cancer Epidemiol Biomarkers Prev. 23, 735-41 (2014).
-
(2014)
Cancer Epidemiol Biomarkers Prev.
, vol.23
, pp. 735-741
-
-
Yu, G.1
-
10
-
-
84925450745
-
Differences in gastric mucosal microbiota profiling in patients with chronic gastritis, intestinal metaplasia, and gastric cancer using pyrosequencing methods
-
Eun, C. S. et al. Differences in gastric mucosal microbiota profiling in patients with chronic gastritis, intestinal metaplasia, and gastric cancer using pyrosequencing methods. Helicobacter. 19, 407-16 (2014).
-
(2014)
Helicobacter
, vol.19
, pp. 407-416
-
-
Eun, C.S.1
-
12
-
-
50949131523
-
Comparative analysis of human gut microbiota by barcoded pyrosequencing
-
Andersson, A. F. et al. Comparative analysis of human gut microbiota by barcoded pyrosequencing. PLoS One. 3, e2836 (2008)
-
(2008)
PLoS One
, vol.3
, pp. 2836
-
-
Andersson, A.F.1
-
13
-
-
84901390048
-
Helicobacter pylori eradication therapy to prevent gastric cancer in healthy asymptomatic infected individuals: Systematic review and meta-analysis of randomised controlled trials
-
Ford, A. C. et al. Helicobacter pylori eradication therapy to prevent gastric cancer in healthy asymptomatic infected individuals: systematic review and meta-analysis of randomised controlled trials. BMJ. 348, g3174 (2014).
-
(2014)
BMJ.
, vol.348
, pp. 3174
-
-
Ford, A.C.1
-
14
-
-
78650496969
-
Lack of commensal flora in helicobacter pylori-infected ins-gas mice reduces gastritis and delays intraepithelial neoplasia
-
Lofgren, J. L. et al. Lack of commensal flora in Helicobacter pylori-infected INS-GAS mice reduces gastritis and delays intraepithelial neoplasia. Gastroenterology. 140, 210-20. (2011).
-
(2011)
Gastroenterology
, vol.140
, pp. 210-220
-
-
Lofgren, J.L.1
-
15
-
-
84889663851
-
Gastric colonisation with a restricted commensal microbiota replicates the promotion of neoplastic lesions by diverse intestinal microbiota in the helicobacter pylori ins-gas mouse model of gastric carcinogenesis
-
Lertpiriyapong, K. et al. Gastric colonisation with a restricted commensal microbiota replicates the promotion of neoplastic lesions by diverse intestinal microbiota in the Helicobacter pylori INS-GAS mouse model of gastric carcinogenesis. Gut. 63, 54-63 (2014).
-
(2014)
Gut.
, vol.63
, pp. 54-63
-
-
Lertpiriyapong, K.1
-
16
-
-
84906944887
-
Gastric microbiota is altered in oesophagitis and barrett's oesophagus and further modified by proton pump inhibitors
-
Amir, I. et al. Gastric microbiota is altered in oesophagitis and Barrett's oesophagus and further modified by proton pump inhibitors. Environ Microbiol 16, 2905-14 (2014).
-
(2014)
Environ Microbiol
, vol.16
, pp. 2905-2914
-
-
Amir, I.1
-
17
-
-
84905049901
-
Trimmomatic: A flexible trimmer for Illumina sequence data
-
Bolger, A. M., Lohse, M. & Usadel, B. Trimmomatic: a flexible trimmer for Illumina sequence data. Bioinformatics. 30:2114-20 (2014).
-
(2014)
Bioinformatics
, vol.30
, pp. 2114-2120
-
-
Bolger, A.M.1
Lohse, M.2
Usadel, B.3
-
18
-
-
84897676120
-
PEAR: A fast and accurate Illumina Paired-End reAd mergeR
-
Zhang J. et al. PEAR: a fast and accurate Illumina Paired-End reAd mergeR. Bioinformatics. 30, 614-20 (2014).
-
(2014)
Bioinformatics
, vol.30
, pp. 614-620
-
-
Zhang, J.1
-
19
-
-
0036226603
-
Blat-the blast-like alignment tool
-
Kent, W. J. BLAT-the BLAST-like alignment tool. Genome Res. 12, 656-64 (2002).
-
(2002)
Genome Res.
, vol.12
, pp. 656-664
-
-
Kent, W.J.1
-
20
-
-
84884904719
-
UPARSE: Highly accurate OTU sequences from microbial amplicon reads
-
Edgar, R. C. UPARSE: highly accurate OTU sequences from microbial amplicon reads. Nat Methods. 10, 996-8 (2013).
-
(2013)
Nat Methods
, vol.10
, pp. 996-998
-
-
Edgar, R.C.1
-
21
-
-
34548293679
-
Naïve Bayesian classifier for rapid assignment of rrna sequences into the new bacterial taxonomy
-
Wang, Q. et al. Naïve Bayesian Classifier for Rapid Assignment of rRNA Sequences into the New Bacterial Taxonomy. Appl Environ Microbiol. 73, 5261-5267 (2007).
-
(2007)
Appl Environ Microbiol
, vol.73
, pp. 5261-5267
-
-
Wang, Q.1
-
22
-
-
77957244650
-
Search and clustering orders of magnitude faster than blast
-
Edgar, R. C. Search and clustering orders of magnitude faster than BLAST. Bioinformatics. 26, 2460-1 (2010).
-
(2010)
Bioinformatics
, vol.26
, pp. 2460-2461
-
-
Edgar, R.C.1
-
23
-
-
77952243141
-
QIIME allows analysis of high-throughput community sequencing data
-
Caporaso, J. G. et al. QIIME allows analysis of high-throughput community sequencing data. Nat Methods 7, 335-6 (2010).
-
(2010)
Nat Methods
, vol.7
, pp. 335-336
-
-
Caporaso, J.G.1
-
24
-
-
33746061683
-
Greengenes, a chimera-checked 16s rrna gene database and workbench compatible with arb
-
DeSantis T. Z. et al. Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB. Appl Environ Microbiol 72, 5069-72 (2006).
-
(2006)
Appl Environ Microbiol
, vol.72
, pp. 5069-5072
-
-
DeSantis, T.Z.1
-
25
-
-
78650407057
-
Phylogenetic diversity measures based on Hill numbers
-
Chao, A., Chiu, C. H. & Jost, L. Phylogenetic diversity measures based on Hill numbers. Phi. Trans. R. Soc. B. 365, 3599-3609 (2010).
-
(2010)
Phi. Trans. R. Soc. B.
, vol.365
, pp. 3599-3609
-
-
Chao, A.1
Chiu, C.H.2
Jost, L.3
-
26
-
-
85027927719
-
Enterotype of the human gut microbiome
-
Arumugam, M. et al. Enterotype of the human gut microbiome. Nature. 473, 174-180 (2011).
-
(2011)
Nature
, vol.473
, pp. 174-180
-
-
Arumugam, M.1
-
28
-
-
79959383523
-
Metagenomic biomarker discovery and explanation
-
2011-12-6-r60
-
Segata, N. et al. Metagenomic biomarker discovery and explanation. Genome Biol. 12, 2011-12-6-r60 (2011).
-
(2011)
Genome Biol.
, vol.12
-
-
Segata, N.1
|