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Volumn 110, Issue 6, 2017, Pages 795-802

Lentzea chajnantorensis sp. nov., an actinobacterium from a very high altitude Cerro Chajnantor gravel soil in northern Chile

Author keywords

Atacama Desert; Lentzea; Polyphasic taxonomy

Indexed keywords

ALKADIENE; BACTERIAL DNA; RIBOSOME DNA; RNA 16S;

EID: 85015717440     PISSN: 00036072     EISSN: 15729699     Source Type: Journal    
DOI: 10.1007/s10482-017-0851-5     Document Type: Article
Times cited : (18)

References (38)
  • 1
    • 84986596668 scopus 로고    scopus 로고
    • The Atacama Desert: technical resources and the growing importance of novel microbial diversity
    • COI: 1:CAS:528:DC%2BC28XhsFensb%2FK
    • Bull AT, Asenjo JA, Goodfellow M, Gómez-Silva B (2016) The Atacama Desert: technical resources and the growing importance of novel microbial diversity. Ann Rev Microbiol 70:215–234. doi:10.1146/annurev-micro-102215-095236
    • (2016) Ann Rev Microbiol , vol.70 , pp. 215-234
    • Bull, A.T.1    Asenjo, J.A.2    Goodfellow, M.3    Gómez-Silva, B.4
  • 2
    • 84900811629 scopus 로고    scopus 로고
    • Streptomyces leeuwenhoekii sp. nov., the producer of chaxalactins and chaxamycins, forms a distinct branch in Streptomyces gene trees
    • COI: 1:CAS:528:DC%2BC2cXmsV2ntrw%3D, PID: 24604690
    • Busarakam K, Bull AT, Girard G, Labeda DP, van Wezel GP, Goodfellow M (2014) Streptomyces leeuwenhoekii sp. nov., the producer of chaxalactins and chaxamycins, forms a distinct branch in Streptomyces gene trees. Antonie Van Leeuwenhoek 105:849–861. doi:10.1007/s10482-014-0139-y
    • (2014) Antonie Van Leeuwenhoek , vol.105 , pp. 849-861
    • Busarakam, K.1    Bull, A.T.2    Girard, G.3    Labeda, D.P.4    van Wezel, G.P.5    Goodfellow, M.6
  • 3
    • 84946488793 scopus 로고    scopus 로고
    • Lentzea guizhouensis sp. nov., a novel lithophilous actinobacterium isolated from limestone from the Karst area, Guizhou
    • COI: 1:CAS:528:DC%2BC2MXhsFKgtbzL, PID: 26377575
    • Cao C, Zhou X, Qin S, Tao F, Jiang J, Lian B (2015) Lentzea guizhouensis sp. nov., a novel lithophilous actinobacterium isolated from limestone from the Karst area, Guizhou. China Antonie van Leeuwenhoek 108:1365–1372. doi:10.1007/s10482-015-0589-x
    • (2015) China Antonie van Leeuwenhoek , vol.108 , pp. 1365-1372
    • Cao, C.1    Zhou, X.2    Qin, S.3    Tao, F.4    Jiang, J.5    Lian, B.6
  • 4
    • 0017758250 scopus 로고
    • A rapid method for the base ratio determination of bacterial DNA
    • COI: 1:CAS:528:DyaE2sXkvFyhtb4%3D, PID: 907108
    • Cashion P, Holder-Franklin MA, McCully J, Franklin M (1977) A rapid method for the base ratio determination of bacterial DNA. Anal Biochem 81:461–466. doi:10.1016/0003-2697(77)90720-5
    • (1977) Anal Biochem , vol.81 , pp. 461-466
    • Cashion, P.1    Holder-Franklin, M.A.2    McCully, J.3    Franklin, M.4
  • 5
    • 0021991958 scopus 로고
    • Menaquinone composition of mycolic acid-containing actinomycetes and some sporoactinomycetes
    • COI: 1:CAS:528:DyaL2MXhs1ent74%3D, PID: 3980298
    • Collins MD, Goodfellow M, Minnikin DE, Alderson G (1985) Menaquinone composition of mycolic acid-containing actinomycetes and some sporoactinomycetes. J Appl Bacteriol 58:77–86. doi:10.1111/j.1365-2672.1985.tb01431.x
    • (1985) J Appl Bacteriol , vol.58 , pp. 77-86
    • Collins, M.D.1    Goodfellow, M.2    Minnikin, D.E.3    Alderson, G.4
  • 6
    • 0014713693 scopus 로고
    • The quantitative measurement of DNA hybridization from renaturation rates
    • PID: 4984993
    • De Ley J, Cattoir H, Reynaerts A (1970) The quantitative measurement of DNA hybridization from renaturation rates. Eur J Biochem 12:133–142. doi:10.1111/j.1432-1033.1970.tb00830.x
    • (1970) Eur J Biochem , vol.12 , pp. 133-142
    • De Ley, J.1    Cattoir, H.2    Reynaerts, A.3
  • 7
    • 0000461280 scopus 로고
    • Confidence limits on phylogenies: an approach using the bootstrap
    • Felsenstein J (1985) Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39:783–791
    • (1985) Evolution , vol.39 , pp. 783-791
    • Felsenstein, J.1
  • 8
    • 0020549589 scopus 로고
    • Studies on the spectrophotometric determination of DNA hybridization from renaturation rates
    • COI: 1:CAS:528:DyaL3sXktlGmt7s%3D, PID: 23194591
    • Huss VAR, Festl H, Schleifer KH (1983) Studies on the spectrophotometric determination of DNA hybridization from renaturation rates. Syst Appl Microbiol 4:184–192. doi:10.1016/S0723-2020(83)80048-4
    • (1983) Syst Appl Microbiol , vol.4 , pp. 184-192
    • Huss, V.A.R.1    Festl, H.2    Schleifer, K.H.3
  • 9
    • 0036022443 scopus 로고    scopus 로고
    • Streptomyces thermospinisporus sp. nov., a moderately thermophilic carboxydotrophic streptomycete isolated from soil
    • COI: 1:CAS:528:DC%2BD38Xmt1Gku70%3D, PID: 12148632
    • Kim SB, Goodfellow M (2002) Streptomyces thermospinisporus sp. nov., a moderately thermophilic carboxydotrophic streptomycete isolated from soil. Int J Syst Evol Microbiol 52:1225–1228. doi:10.1099/00207713-52-4-1225
    • (2002) Int J Syst Evol Microbiol , vol.52 , pp. 1225-1228
    • Kim, S.B.1    Goodfellow, M.2
  • 10
    • 0019296687 scopus 로고
    • A simple method for estimating evolutionary rate of base substitutions through comparative studies of nucleotide sequences
    • COI: 1:CAS:528:DyaL3MXmtFSktg%3D%3D, PID: 7463489
    • Kimura M (1980) A simple method for estimating evolutionary rate of base substitutions through comparative studies of nucleotide sequences. J Mol Evol 16:111–120
    • (1980) J Mol Evol , vol.16 , pp. 111-120
    • Kimura, M.1
  • 11
    • 0023752959 scopus 로고
    • Fatty acids, antibiotic resistance and deoxyribonucleic acid homology groups of Bradyrhizobium japonicum
    • COI: 1:CAS:528:DyaL1MXlsVWqsQ%3D%3D
    • Kuykendall LD, Roy MA, O’Neill JJ, Devine TE (1988) Fatty acids, antibiotic resistance and deoxyribonucleic acid homology groups of Bradyrhizobium japonicum. Int J Syst Evolut Microbiol 38:358–361. doi:10.1099/00207713-38-4-358
    • (1988) Int J Syst Evolut Microbiol , vol.38 , pp. 358-361
    • Kuykendall, L.D.1    Roy, M.A.2    O’Neill, J.J.3    Devine, T.E.4
  • 12
    • 84946510844 scopus 로고    scopus 로고
    • Genus XI. Lentzea Yassin, Rainey, Brzezinka, Jahnke, Weissbrodt, Budzikiewicz, Stackebrandt, and Schaal 1995, 362vp emend. Labeda, Hatano, Kroppenstedt and Tamura 2001, 1049
    • Goodfellow M, Kampfer P, Busse H, Trujillo ME, Suzuki K, Ludwig W, Whitman WB, (eds), 5, The Actinobacteria, Part B, Springer, New York
    • Labeda DP (2012) Genus XI. Lentzea Yassin, Rainey, Brzezinka, Jahnke, Weissbrodt, Budzikiewicz, Stackebrandt, and Schaal 1995, 362vp emend. Labeda, Hatano, Kroppenstedt and Tamura 2001, 1049. In: Goodfellow M, Kämpfer P, Busse H, Trujillo ME, Suzuki K, Ludwig W, Whitman WB (eds) Bergey’s manual of systematic bacteriology, vol 5. The Actinobacteria, Part B, Springer, New York, pp 1379–1383
    • (2012) Bergey’s manual of systematic bacteriology , pp. 1379-1383
    • Labeda, D.P.1
  • 14
    • 0034980137 scopus 로고    scopus 로고
    • Revival of the genus Lentzea and proposal for Lechevalieria gen. nov
    • COI: 1:CAS:528:DC%2BD3MXks1Khsrc%3D
    • Labeda DP, Hatano K, Kroppenstedt RM, Tamura T (2001) Revival of the genus Lentzea and proposal for Lechevalieria gen. nov. Int J Syst Evolut Microbiol 51:1045–1050. doi:10.1099/00207713-51-3-1045
    • (2001) Int J Syst Evolut Microbiol , vol.51 , pp. 1045-1050
    • Labeda, D.P.1    Hatano, K.2    Kroppenstedt, R.M.3    Tamura, T.4
  • 16
    • 0002044672 scopus 로고
    • Chemical composition as a criterion in the classification of aerobic actinomycetes
    • Lechevalier MP, Lechevalier H (1970) Chemical composition as a criterion in the classification of aerobic actinomycetes. Int J Syst Bacteriol 2:435–443
    • (1970) Int J Syst Bacteriol , vol.2 , pp. 435-443
    • Lechevalier, M.P.1    Lechevalier, H.2
  • 17
    • 0343674730 scopus 로고    scopus 로고
    • Saccharothrix violacea sp. nov., isolated from a gold mine cave, and Saccharothrix albidocapillata comb. nov
    • COI: 1:CAS:528:DC%2BD3cXktF2gt70%3D, PID: 10843077
    • Lee SD, Kim ES, Roe JH, Kim JH, Kang SO, Hah YC (2000) Saccharothrix violacea sp. nov., isolated from a gold mine cave, and Saccharothrix albidocapillata comb. nov. Int J Syst Evol Microbiol 50:1315–1323
    • (2000) Int J Syst Evol Microbiol , vol.50 , pp. 1315-1323
    • Lee, S.D.1    Kim, E.S.2    Roe, J.H.3    Kim, J.H.4    Kang, S.O.5    Hah, Y.C.6
  • 18
    • 0019982011 scopus 로고
    • Single derivatization method for routine analysis of bacterial whole-cell fatty acid methyl esters, including hydroxy acids
    • COI: 1:CAS:528:DyaL38XlsVWitrg%3D, PID: 7130373
    • Miller LT (1982) Single derivatization method for routine analysis of bacterial whole-cell fatty acid methyl esters, including hydroxy acids. J Clin Microbiol 16:584–586
    • (1982) J Clin Microbiol , vol.16 , pp. 584-586
    • Miller, L.T.1
  • 19
    • 0016684892 scopus 로고
    • Differentiation of Mycobacterium, Nocardia and related taxa by thin-layer chromatographic analysis of whole-organism methanolysates
    • COI: 1:STN:280:DyaE2M3ht1yhtw%3D%3D, PID: 1151335
    • Minnikin DE, Alshamaony L, Goodfellow M (1975) Differentiation of Mycobacterium, Nocardia and related taxa by thin-layer chromatographic analysis of whole-organism methanolysates. J Gen Microbiol 88:200–204
    • (1975) J Gen Microbiol , vol.88 , pp. 200-204
    • Minnikin, D.E.1    Alshamaony, L.2    Goodfellow, M.3
  • 23
    • 76549133523 scopus 로고    scopus 로고
    • Lechevalieria atacamensis sp. nov., Lechevalieria deserti sp. nov. and Lechevalieria roselyniae sp. nov., isolated from hyperarid soils
    • PID: 19651742
    • Okoro CK, Bull AT, Mutreja A, Rong X, Huang Y, Goodfellow M (2010) Lechevalieria atacamensis sp. nov., Lechevalieria deserti sp. nov. and Lechevalieria roselyniae sp. nov., isolated from hyperarid soils. Int J Syst Evol Microbiol 60:296–300
    • (2010) Int J Syst Evol Microbiol , vol.60 , pp. 296-300
    • Okoro, C.K.1    Bull, A.T.2    Mutreja, A.3    Rong, X.4    Huang, Y.5    Goodfellow, M.6
  • 26
    • 0001023407 scopus 로고
    • Methods for characterization of Streptomyces species
    • Shirling EB, Gottlieb D (1966) Methods for characterization of Streptomyces species. Int J Syst Bacteriol 16:313–340
    • (1966) Int J Syst Bacteriol , vol.16 , pp. 313-340
    • Shirling, E.B.1    Gottlieb, D.2
  • 27
    • 0016202002 scopus 로고
    • Simplified approach to identification of aerobic actinomycetes by thin-layer chromatography
    • COI: 1:STN:280:DyaE2czgslamsg%3D%3D, PID: 4605116
    • Staneck JL, Roberts GD (1974) Simplified approach to identification of aerobic actinomycetes by thin-layer chromatography. Appl Microbiol 28:226–231
    • (1974) Appl Microbiol , vol.28 , pp. 226-231
    • Staneck, J.L.1    Roberts, G.D.2
  • 28
    • 84890330527 scopus 로고    scopus 로고
    • MEGA6: molecular evolutionary genetics analysis version 6.0
    • COI: 1:CAS:528:DC%2BC3sXhvVKhurzP, PID: 24132122
    • Tamura K, Stecher G, Peterson D, Filipski A, Kumar S (2013) MEGA6: molecular evolutionary genetics analysis version 6.0. Mol Biol Evol 30:2725–2729
    • (2013) Mol Biol Evol , vol.30 , pp. 2725-2729
    • Tamura, K.1    Stecher, G.2    Peterson, D.3    Filipski, A.4    Kumar, S.5
  • 29
    • 84859982600 scopus 로고    scopus 로고
    • Visualization and curve-parameter estimation strategies for efficient exploration of phenotype microarray kinetics
    • COI: 1:CAS:528:DC%2BC38Xms1Cnt74%3D, PID: 22536335
    • Vaas LAI, Sikorski J, Michael V, Göker M, Klenk HP (2012) Visualization and curve-parameter estimation strategies for efficient exploration of phenotype microarray kinetics. PLoS ONE 7:e34846. doi:10.1371/journal.pone.0034846
    • (2012) PLoS ONE , vol.7
    • Vaas, L.A.I.1    Sikorski, J.2    Michael, V.3    Göker, M.4    Klenk, H.P.5
  • 36
    • 76849113587 scopus 로고    scopus 로고
    • Alloactinosynnema album gen. nov., sp. nov., a member of the family Actinosynnemataceae isolated from soil
    • COI: 1:CAS:528:DC%2BC3cXis1agurs%3D, PID: 19648319
    • Yuan LJ, Zhang YQ, Yu LY, Liu HY, Guan Y, Lee JC, Kim CJ, Zhang YQ (2010) Alloactinosynnema album gen. nov., sp. nov., a member of the family Actinosynnemataceae isolated from soil. Int J Syst Evol Microbiol 60:39–43. doi:10.1099/ijs.0.010744-0
    • (2010) Int J Syst Evol Microbiol , vol.60 , pp. 39-43
    • Yuan, L.J.1    Zhang, Y.Q.2    Yu, L.Y.3    Liu, H.Y.4    Guan, Y.5    Lee, J.C.6    Kim, C.J.7    Zhang, Y.Q.8
  • 37
    • 3543016186 scopus 로고    scopus 로고
    • Some approaches to the selective isolation of actinomycetes of the genus Actinomadura from soil
    • COI: 1:CAS:528:DC%2BD3sXoslOhtw%3D%3D
    • Zakharova OS, Zenova GM, Zvyagintsev DG (2003) Some approaches to the selective isolation of actinomycetes of the genus Actinomadura from soil. Microbiology 72:110–113. doi:10.1023/A:1022294526830
    • (2003) Microbiology , vol.72 , pp. 110-113
    • Zakharova, O.S.1    Zenova, G.M.2    Zvyagintsev, D.G.3
  • 38
    • 34248189183 scopus 로고    scopus 로고
    • Lechevalieria fradiae sp. nov., a novel actinomycete isolated from soil in China
    • COI: 1:CAS:528:DC%2BD2sXlslKrsbs%3D, PID: 17392215
    • Zhang J, Xie Q, Liu Z, Goodfellow M (2007) Lechevalieria fradiae sp. nov., a novel actinomycete isolated from soil in China. Int J Syst Evol Microbiol 57:832–836
    • (2007) Int J Syst Evol Microbiol , vol.57 , pp. 832-836
    • Zhang, J.1    Xie, Q.2    Liu, Z.3    Goodfellow, M.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.