메뉴 건너뛰기




Volumn 81, Issue 3, 2017, Pages 453-459

Using the CRISPR/Cas9 system to eliminate native plasmids of Zymomonas mobilis ZM4

Author keywords

[No Author keywords available]

Indexed keywords

CLONING; ESCHERICHIA COLI; GENES; NUCLEIC ACIDS; RNA;

EID: 85012254087     PISSN: 09168451     EISSN: 13476947     Source Type: Journal    
DOI: 10.1080/09168451.2016.1189312     Document Type: Article
Times cited : (30)

References (27)
  • 1
    • 78549287163 scopus 로고    scopus 로고
    • The genome-scale metabolic network analysis of Zymomonas mobilis ZM4 explains physiological features and suggests ethanol and succinic acid production strategies
    • Lee KY, Park JM, Kim TY, et al. The genome-scale metabolic network analysis of Zymomonas mobilis ZM4 explains physiological features and suggests ethanol and succinic acid production strategies. Microb. Cell Fact. 2010;9:2-12.
    • (2010) Microb. Cell Fact. , vol.9 , pp. 2-12
    • Lee, K.Y.1    Park, J.M.2    Kim, T.Y.3
  • 2
    • 21144437397 scopus 로고    scopus 로고
    • The genome sequence of the ethanologenic bacterium Zymomonas mobilis ZM4
    • Seo JS, Chong H, Park HS, et al. The genome sequence of the ethanologenic bacterium Zymomonas mobilis ZM4. Nat. Biotechnol. 2005;23:63-68.
    • (2005) Nat. Biotechnol , vol.23 , pp. 63-68
    • Seo, J.S.1    Chong, H.2    Park, H.S.3
  • 3
    • 84861999245 scopus 로고    scopus 로고
    • Transcriptome profiling of Zymomonas mobilis under ethanol stress
    • He MX, Wu B, Shui ZX, et al. Transcriptome profiling of Zymomonas mobilis under ethanol stress. Appl. Microbiol. Biotechnol. 2012;95:189-199.
    • (2012) Appl. Microbiol. Biotechnol , vol.95 , pp. 189-199
    • He, M.X.1    Wu, B.2    Shui, Z.X.3
  • 4
    • 84903421930 scopus 로고    scopus 로고
    • Zymomonas mobilis: A novel platform for future biorefineries
    • He MX, Wu B, Qin H, et al. Zymomonas mobilis: a novel platform for future biorefineries. Biotechnol. Biofuels. 2014;7:2-15.
    • (2014) Biotechnol. Biofuels , vol.7 , pp. 2-15
    • He, M.X.1    Wu, B.2    Qin, H.3
  • 5
    • 84884288934 scopus 로고    scopus 로고
    • Genome engineering using the CRISPR-Cas9 system
    • Ran FA, Hsu PD, Lin CY, et al. Genome engineering using the CRISPR-Cas9 system. Cell. 2013;154:1380-1389.
    • (2013) Cell. , vol.154 , pp. 1380-1389
    • Ran, F.A.1    Hsu, P.D.2    Lin, C.Y.3
  • 6
    • 84877103949 scopus 로고    scopus 로고
    • Generation of gene-modified mice via Cas9/RNA-mediated gene targeting
    • Shen B, Zhang J, Wu H, et al. Generation of gene-modified mice via Cas9/RNA-mediated gene targeting. Cell Res. 2013;23:720-723.
    • (2013) Cell Res. , vol.23 , pp. 720-723
    • Shen, B.1    Zhang, J.2    Wu, H.3
  • 7
    • 84874608929 scopus 로고    scopus 로고
    • RNA-guided editing of bacterial genomes using CRISPR-Cas systems
    • Jiang W, Bikard D, Cox D, et al. RNA-guided editing of bacterial genomes using CRISPR-Cas systems. Nat. Biotechnol. 2013;31:233-239.
    • (2013) Nat. Biotechnol , vol.31 , pp. 233-239
    • Jiang, W.1    Bikard, D.2    Cox, D.3
  • 8
    • 84865070369 scopus 로고    scopus 로고
    • A programmable dual-RNA-guided DNA endonuclease in adaptive bacterial immunity
    • Jinek M, Chylinski K, Fonfara I, et al. A programmable dual-RNA-guided DNA endonuclease in adaptive bacterial immunity. Science. 2012;337:816-821.
    • (2012) Science , vol.337 , pp. 816-821
    • Jinek, M.1    Chylinski, K.2    Fonfara, I.3
  • 9
    • 84899087750 scopus 로고    scopus 로고
    • Degenerate target sites mediate rapid primed CRISPR adaptation
    • Fineran PC, Gerritzen MJ, Suárez-Diez M, et al. Degenerate target sites mediate rapid primed CRISPR adaptation. Proc. Natl. Acad. Sci. 2014;111:E1629-E1638.
    • (2014) Proc. Natl. Acad. Sci. , vol.111 , pp. E1629-E1638
    • Fineran, P.C.1    Gerritzen, M.J.2    Suárez-Diez, M.3
  • 10
    • 78149261827 scopus 로고    scopus 로고
    • The CRISPR/Cas bacterial immune system cleaves bacteriophage and plasmid DNA
    • Garneau JE, Dupuis M-È, Villion M, et al. The CRISPR/Cas bacterial immune system cleaves bacteriophage and plasmid DNA. Nature. 2010;468:67-71.
    • (2010) Nature , vol.468 , pp. 67-71
    • Garneau, J.E.1    Dupuis, M.-È.2    Villion, M.3
  • 11
    • 84860433123 scopus 로고    scopus 로고
    • CRISPR interference directs strand specific spacer acquisition
    • Swarts DC, Mosterd C, van Passel M, et al. CRISPR interference directs strand specific spacer acquisition. PLoS ONE. 2012;7:e35888.
    • (2012) PLoS ONE. , vol.7
    • Swarts, D.C.1    Mosterd, C.2    Van Passel, M.3
  • 12
    • 84983142945 scopus 로고    scopus 로고
    • Exploiting CRISPR-Cas nucleases to produce sequence-specific antimicrobials
    • Bikard D, Euler CW, Jiang W, et al. Exploiting CRISPR-Cas nucleases to produce sequence-specific antimicrobials, Nat. Biotechnol. 2014, 32:1146-1150.
    • (2014) Nat. Biotechnol , vol.32 , pp. 1146-1150
    • Bikard, D.1    Euler, C.W.2    Jiang, W.3
  • 13
    • 0019987836 scopus 로고
    • Minimal medium for isolation of auxotrophic Zymomonas mutants
    • Goodman Amanda E., Rogers Peter L., et al. Minimal medium for isolation of auxotrophic Zymomonas mutants. Appl. Environ. Microbiol. 1982;44:496-498.
    • (1982) Appl. Environ. Microbiol. , vol.44 , pp. 496-498
    • Goodman, A.E.1    Rogers, P.L.2
  • 15
    • 84954526600 scopus 로고    scopus 로고
    • Three new shuttle vectors for heterologous expression in Zymomonas mobilis
    • Cao QH, Li T, Shao HH, et al. Three new shuttle vectors for heterologous expression in Zymomonas mobilis. Electron. J. Biotechnol. 2016;19:33-40.http://dx.doi.org/10.1016/j.ejbt.2015.11.004
    • (2016) Electron. J. Biotechnol , vol.19 , pp. 33-40
    • Cao, Q.H.1    Li, T.2    Shao, H.H.3
  • 16
    • 84865749207 scopus 로고    scopus 로고
    • Cloning and expression of amyE gene from Bacillus subtilis in Zymomonas mobilis and direct production of ethanol from soluble starch
    • Wang GJ, Wang ZS, Zhang YW, et al. Cloning and expression of amyE gene from Bacillus subtilis in Zymomonas mobilis and direct production of ethanol from soluble starch. Biotechnol. Bioproc. Eng. 2012;17:780-786.
    • (2012) Biotechnol. Bioproc. Eng. , vol.17 , pp. 780-786
    • Wang, G.J.1    Wang, Z.S.2    Zhang, Y.W.3
  • 17
    • 0032929661 scopus 로고    scopus 로고
    • Characterization of the mobilization region of the Zymomonas mobilis ATCC10988 plasmid pZMO3
    • Afendra AS, Vartholomatos G, Arvanitis N, et al. Characterization of the mobilization region of the Zymomonas mobilis ATCC10988 plasmid pZMO3. Plasmid. 1999;41:73-77.
    • (1999) Plasmid , vol.41 , pp. 73-77
    • Afendra, A.S.1    Vartholomatos, G.2    Arvanitis, N.3
  • 18
    • 0033818260 scopus 로고    scopus 로고
    • Characterization and replication properties of the Zymomonas mobilis ATCC 10988 plasmids pZMO1 and pZMO2
    • Arvanitis N, Pappas KM, Kolios G, et al. Characterization and replication properties of the Zymomonas mobilis ATCC 10988 plasmids pZMO1 and pZMO2. Plasmid. 2000;44:127-137.
    • (2000) Plasmid , vol.44 , pp. 127-137
    • Arvanitis, N.1    Pappas, K.M.2    Kolios, G.3
  • 19
    • 33847608289 scopus 로고    scopus 로고
    • Harnessing homologous recombination in vitro to generate recombinant DNA via SLIC
    • Li MZ, Elledge SJ. Harnessing homologous recombination in vitro to generate recombinant DNA via SLIC. Nat. Methods. 2007;4:251-256.
    • (2007) Nat. Methods , vol.4 , pp. 251-256
    • Li, M.Z.1    Elledge, S.J.2
  • 20
    • 84862930642 scopus 로고    scopus 로고
    • Improvement of the sequence and ligation independent cloning (SLIC) method
    • Wang GJ, He C, Zhang YZ. Improvement of the sequence and ligation independent cloning (SLIC) method. J. Sichuan Univ. (Nat. Sci. Ed). 2010;47:893-898.
    • (2010) J. Sichuan Univ. (Nat. Sci. Ed) , vol.47 , pp. 893-898
    • Wang, G.J.1    He, C.2    Zhang, Y.Z.3
  • 21
    • 0034612342 scopus 로고    scopus 로고
    • One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products
    • Datsenko KA, Wanner BL. One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products. Proc. Natl. Acad. Sci. 2000;97:6640-6645.
    • (2000) Proc. Natl. Acad. Sci. , vol.97 , pp. 6640-6645
    • Datsenko, K.A.1    Wanner, B.L.2
  • 22
    • 84890014631 scopus 로고    scopus 로고
    • Efficient generation of genome-modified mice via offset-nicking by CRISPR/Cas system
    • Fujii W, Kawasaki K, Sugiura K, et al. Efficient generation of genome-modified mice via offset-nicking by CRISPR/Cas system. Nucleic Acids Res. 2013;41:e187-e187.
    • (2013) Nucleic Acids Res. , vol.41 , pp. e187
    • Fujii, W.1    Kawasaki, K.2    Sugiura, K.3
  • 23
    • 42449157617 scopus 로고    scopus 로고
    • Improved determination of plasmid copy number using quantitative real-time PCR for monitoring fermentation processes
    • Škulj M, Okršlar V, Jalen Š, et al. Improved determination of plasmid copy number using quantitative real-time PCR for monitoring fermentation processes. Microb. Cell Fact. 2008;7:1-12.
    • (2008) Microb. Cell Fact. , vol.7 , pp. 1-12
    • Škulj, M.1    Okršlar, V.2    Jalen, Š.3
  • 24
    • 84898476322 scopus 로고    scopus 로고
    • PZMO7-Derived shuttle vectors for heterologous protein expression and proteomic applications in the ethanol-producing bacterium Zymomonas mobilis
    • So LY, Chen WY, Lacap-Bugler DC, et al. pZMO7-Derived shuttle vectors for heterologous protein expression and proteomic applications in the ethanol-producing bacterium Zymomonas mobilis. BMC Microbiol. 2014;14:2-16.
    • (2014) BMC Microbiol. , vol.14 , pp. 2-16
    • So, L.Y.1    Chen, W.Y.2    Lacap-Bugler, D.C.3
  • 26
    • 84920114984 scopus 로고    scopus 로고
    • Pyruvate decarboxylase and alcohol dehydrogenase overexpression in Escherichia coli resulted in high ethanol production and rewired metabolic enzyme networks
    • Yang M, Li X, Bu C, et al. Pyruvate decarboxylase and alcohol dehydrogenase overexpression in Escherichia coli resulted in high ethanol production and rewired metabolic enzyme networks. World J. Microb. Biot. 2014;30:2871-2883.
    • (2014) World J. Microb. Biot , vol.30 , pp. 2871-2883
    • Yang, M.1    Li, X.2    Bu, C.3
  • 27
    • 0031440479 scopus 로고    scopus 로고
    • Rolling-circle replication of bacterial plasmids
    • Khan SA. Rolling-circle replication of bacterial plasmids. Microbiol. Mol. Biol. Rev. 1997;61:442-455.
    • (1997) Microbiol. Mol. Biol. Rev. , vol.61 , pp. 442-455
    • Khan, S.A.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.