-
1
-
-
34347399464
-
Genome plasticity a key factor in the success of polyploid wheat under domestication
-
Dubcovsky J, Dvorak J (2007) Genome plasticity a key factor in the success of polyploid wheat under domestication. Science 316(5833):1862-1866.
-
(2007)
Science
, vol.316
, Issue.5833
, pp. 1862-1866
-
-
Dubcovsky, J.1
Dvorak, J.2
-
2
-
-
84875751606
-
Production of a high-efficiency TILLING population through polyploidization
-
Tsai H, et al. (2013) Production of a high-efficiency TILLING population through polyploidization. Plant Physiol 161(4):1604-1614.
-
(2013)
Plant Physiol
, vol.161
, Issue.4
, pp. 1604-1614
-
-
Tsai, H.1
-
3
-
-
77954182317
-
Diversity of agronomic and morphological traits in a mutant population of bread wheat studied in the Healthgrain program
-
Rakszegi M, et al. (2010) Diversity of agronomic and morphological traits in a mutant population of bread wheat studied in the Healthgrain program. Euphytica 174: 409-421.
-
(2010)
Euphytica
, vol.174
, pp. 409-421
-
-
Rakszegi, M.1
-
4
-
-
19944416942
-
TILLING moves beyond functional genomics into crop improvement
-
Slade AJ, Knauf VC (2005) TILLING moves beyond functional genomics into crop improvement. Transgenic Res 14(2):109-115.
-
(2005)
Transgenic Res
, vol.14
, Issue.2
, pp. 109-115
-
-
Slade, A.J.1
Knauf, V.C.2
-
5
-
-
70349608873
-
A modified TILLING approach to detect induced mutations in tetraploid and hexaploid wheat
-
Uauy C, et al. (2009) A modified TILLING approach to detect induced mutations in tetraploid and hexaploid wheat. BMC Plant Biol 9:115.
-
(2009)
BMC Plant Biol
, vol.9
, pp. 115
-
-
Uauy, C.1
-
6
-
-
84864498146
-
TILLING in extremis
-
Wang TL, Uauy C, Robson F, Till B (2012) TILLING in extremis. Plant Biotechnol J 10(7):761-772.
-
(2012)
Plant Biotechnol J
, vol.10
, Issue.7
, pp. 761-772
-
-
Wang, T.L.1
Uauy, C.2
Robson, F.3
Till, B.4
-
7
-
-
77449121614
-
Target-enrichment strategies for next-generation sequencing
-
Mamanova L, et al. (2010) Target-enrichment strategies for next-generation sequencing. Nat Methods 7(2):111-118.
-
(2010)
Nat Methods
, vol.7
, Issue.2
, pp. 111-118
-
-
Mamanova, L.1
-
8
-
-
84947426368
-
Mutation scanning in wheat by exon capture and next-generation sequencing
-
King R, et al. (2015) Mutation scanning in wheat by exon capture and next-generation sequencing. PLoS One 10(9):e0137549.
-
(2015)
PLoS One
, vol.10
, Issue.9
, pp. e0137549
-
-
King, R.1
-
9
-
-
84982994492
-
A sorghum mutant resource as an efficient platform for gene discovery in grasses
-
Jiao Y, et al. (2016) A sorghum mutant resource as an efficient platform for gene discovery in grasses. Plant Cell 28(7):1551-1562.
-
(2016)
Plant Cell
, vol.28
, Issue.7
, pp. 1551-1562
-
-
Jiao, Y.1
-
11
-
-
84904382612
-
A chromosome-based draft sequence of the hexaploid bread wheat (Triticum aestivum) genome
-
Mayer KFX, et al. (2014) A chromosome-based draft sequence of the hexaploid bread wheat (Triticum aestivum) genome. Science 345(6194):1251788.
-
(2014)
Science
, vol.345
, Issue.6194
, pp. 1251788
-
-
Mayer, K.F.X.1
-
12
-
-
84939199382
-
A haplotype map of allohexaploid wheat reveals distinct patterns of selection on homoeologous genomes
-
Jordan KW, et al. (2015) A haplotype map of allohexaploid wheat reveals distinct patterns of selection on homoeologous genomes. Genome Biol 16:48.
-
(2015)
Genome Biol
, vol.16
, pp. 48
-
-
Jordan, K.W.1
-
13
-
-
84866280223
-
Transcriptome-scale homoeolog-specific transcript assemblies of bread wheat
-
Schreiber AW, et al. (2012) Transcriptome-scale homoeolog-specific transcript assemblies of bread wheat. BMC Genomics 13:492.
-
(2012)
BMC Genomics
, vol.13
, pp. 492
-
-
Schreiber, A.W.1
-
14
-
-
84928229733
-
TILLING by sequencing to identify induced mutations in stress resistance genes of peanut (Arachis hypogaea)
-
Guo Y, Abernathy B, Zeng Y, Ozias-Akins P (2015) TILLING by sequencing to identify induced mutations in stress resistance genes of peanut (Arachis hypogaea). BMC Genomics 16:157.
-
(2015)
BMC Genomics
, vol.16
, pp. 157
-
-
Guo, Y.1
Abernathy, B.2
Zeng, Y.3
Ozias-Akins, P.4
-
15
-
-
84856777872
-
Evolutionary and comparative analyses of the soybean genome
-
Cannon SB, Shoemaker RC (2012) Evolutionary and comparative analyses of the soybean genome. Breed Sci 61(5):437-444.
-
(2012)
Breed Sci
, vol.61
, Issue.5
, pp. 437-444
-
-
Cannon, S.B.1
Shoemaker, R.C.2
-
16
-
-
84901455676
-
Efficient genome-wide detection and cataloging of EMSinduced mutations using exome capture and next-generation sequencing
-
Henry IM, et al. (2014) Efficient genome-wide detection and cataloging of EMSinduced mutations using exome capture and next-generation sequencing. Plant Cell 26(4):1382-1397.
-
(2014)
Plant Cell
, vol.26
, Issue.4
, pp. 1382-1397
-
-
Henry, I.M.1
-
17
-
-
0043122919
-
SIFT: Predicting amino acid changes that affect protein function
-
Ng PC, Henikoff S (2003) SIFT: Predicting amino acid changes that affect protein function. Nucleic Acids Res 31(13):3812-3814.
-
(2003)
Nucleic Acids Res
, vol.31
, Issue.13
, pp. 3812-3814
-
-
Ng, P.C.1
Henikoff, S.2
-
18
-
-
84906776329
-
Registration of durum wheat germplasm lines with combined mutations in SBEIIa and SBEIIb genes conferring increased amylose and resistant starch
-
Hazard B, Zhang X, Naemeh M, Dubcovsky J (2014) Registration of durum wheat germplasm lines with combined mutations in SBEIIa and SBEIIb genes conferring increased amylose and resistant starch. J Plant Regist 8(3):334-338.
-
(2014)
J Plant Regist
, vol.8
, Issue.3
, pp. 334-338
-
-
Hazard, B.1
Zhang, X.2
Naemeh, M.3
Dubcovsky, J.4
-
19
-
-
84964066315
-
Registration of common wheat germplasm with mutations in SBEII genes conferring increased grain amylose and resistant starch content
-
Schönhofen A, Hazard B, Zhang X, Dubcovsky J (2016) Registration of common wheat germplasm with mutations in SBEII genes conferring increased grain amylose and resistant starch content. J Plant Regist 10(2):200-205.
-
(2016)
J Plant Regist
, vol.10
, Issue.2
, pp. 200-205
-
-
Schönhofen, A.1
Hazard, B.2
Zhang, X.3
Dubcovsky, J.4
-
20
-
-
84967329155
-
Resistant starch as a bioactive compound in colorectal cancer prevention
-
eds Watson RR, Preedy VR Academic, Cambridge, UK
-
Amini A, Khalili L, Keshtiban AK, Homayouni A (2016) Resistant starch as a bioactive compound in colorectal cancer prevention. Bioactive Foods in Health Promotion, eds Watson RR, Preedy VR (Academic, Cambridge, UK), pp 773-780.
-
(2016)
Bioactive Foods in Health Promotion
, pp. 773-780
-
-
Amini, A.1
Khalili, L.2
Keshtiban, A.K.3
Homayouni, A.4
-
21
-
-
27244434038
-
Insulin-sensitizing effects of dietary resistant starch and effects on skeletal muscle and adipose tissue metabolism
-
Robertson MD, Bickerton AS, Dennis AL, Vidal H, Frayn KN (2005) Insulin-sensitizing effects of dietary resistant starch and effects on skeletal muscle and adipose tissue metabolism. Am J Clin Nutr 82(3):559-567.
-
(2005)
Am J Clin Nutr
, vol.82
, Issue.3
, pp. 559-567
-
-
Robertson, M.D.1
Bickerton, A.S.2
Dennis, A.L.3
Vidal, H.4
Frayn, K.N.5
-
22
-
-
85022172646
-
The relationship between resistant starch and glycemic control: A review on current evidence and possible mechanisms
-
Wong THT, Louie JCY (2016) The relationship between resistant starch and glycemic control: A review on current evidence and possible mechanisms. Starke 68:1-9.
-
(2016)
Starke
, vol.68
, pp. 1-9
-
-
Wong, T.H.T.1
Louie, J.C.Y.2
-
23
-
-
84963744973
-
Genetic and physical mapping of the earliness per se locus Eps-Am1 in Triticum monococcum identifies EARLY FLOWERING 3 (ELF3) as a candidate gene
-
Alvarez MA, Tranquilli G, Lewis S, Kippes N, Dubcovsky J (2016) Genetic and physical mapping of the earliness per se locus Eps-Am1 in Triticum monococcum identifies EARLY FLOWERING 3 (ELF3) as a candidate gene. Funct Integr Genomics 16(4):365-382.
-
(2016)
Funct Integr Genomics
, vol.16
, Issue.4
, pp. 365-382
-
-
Alvarez, M.A.1
Tranquilli, G.2
Lewis, S.3
Kippes, N.4
Dubcovsky, J.5
-
24
-
-
84872046553
-
Wheat TILLING mutants show that the vernalization gene VRN1 down-regulates the flowering repressor VRN2 in leaves but is not essential for flowering
-
Chen A, Dubcovsky J (2012) Wheat TILLING mutants show that the vernalization gene VRN1 down-regulates the flowering repressor VRN2 in leaves but is not essential for flowering. PLoS Genet 8(12):e1003134.
-
(2012)
PLoS Genet
, vol.8
, Issue.12
, pp. e1003134
-
-
Chen, A.1
Dubcovsky, J.2
-
25
-
-
84904297375
-
PHYTOCHROME C plays a major role in the acceleration of wheat flowering under long-day photoperiod
-
Chen A, et al. (2014) PHYTOCHROME C plays a major role in the acceleration of wheat flowering under long-day photoperiod. Proc Natl Acad Sci USA 111(28):10037-10044.
-
(2014)
Proc Natl Acad Sci USA
, vol.111
, Issue.28
, pp. 10037-10044
-
-
Chen, A.1
-
26
-
-
84964509930
-
Development and characterization of a spring hexaploid wheat line with no functional VRN2 genes
-
Kippes N, Chen A, Zhang X, Lukaszewski AJ, Dubcovsky J (2016) Development and characterization of a spring hexaploid wheat line with no functional VRN2 genes. Theor Appl Genet 129(7):1417-1428.
-
(2016)
Theor Appl Genet
, vol.129
, Issue.7
, pp. 1417-1428
-
-
Kippes, N.1
Chen, A.2
Zhang, X.3
Lukaszewski, A.J.4
Dubcovsky, J.5
-
27
-
-
84975230958
-
RNA-seq studies using wheat PHYTOCHROME B and PHYTOCHROME C mutants reveal shared and specific functions in the regulation of flowering and shade-Avoidance pathways
-
Pearce S, Kippes N, Chen A, Debernardi JM, Dubcovsky J (2016) RNA-seq studies using wheat PHYTOCHROME B and PHYTOCHROME C mutants reveal shared and specific functions in the regulation of flowering and shade-Avoidance pathways. BMC Plant Biol 16(1):141.
-
(2016)
BMC Plant Biol
, vol.16
, Issue.1
, pp. 141
-
-
Pearce, S.1
Kippes, N.2
Chen, A.3
Debernardi, J.M.4
Dubcovsky, J.5
-
28
-
-
84899426298
-
Characterization of FLOWERING LOCUS T1 (FT1) gene in Brachypodium and wheat
-
Lv B, et al. (2014) Characterization of FLOWERING LOCUS T1 (FT1) gene in Brachypodium and wheat. PLoS One 9(4):e94171.
-
(2014)
PLoS One
, vol.9
, Issue.4
, pp. e94171
-
-
Lv, B.1
-
29
-
-
85011685460
-
2015 Outlook of the U.S. And World Wheat Industries, 2015-2024. Agribusiness & Applied Economics
-
North Dakota State Univ, Fargo, ND
-
Taylor RD, Koo WW (2015) 2015 Outlook of the U.S. and World Wheat Industries, 2015-2024. Agribusiness & Applied Economics. Agribusiness & Applied Economics Report 738 (North Dakota State Univ, Fargo, ND), p 23.
-
(2015)
Agribusiness & Applied Economics Report 738
, pp. 23
-
-
Taylor, R.D.1
Koo, W.W.2
-
30
-
-
84944447344
-
Mutations in durum wheat SBEII genes affect grain yield components, quality, and fermentation responses in rats
-
Hazard B, et al. (2015) Mutations in durum wheat SBEII genes affect grain yield components, quality, and fermentation responses in rats. Crop Sci 55(6):2813-2825.
-
(2015)
Crop Sci
, vol.55
, Issue.6
, pp. 2813-2825
-
-
Hazard, B.1
-
31
-
-
84958746914
-
A splice acceptor site mutation in TaGW2-A1 increases thousand grain weight in tetraploid and hexaploid wheat through wider and longer grains
-
Simmonds J, et al. (2016) A splice acceptor site mutation in TaGW2-A1 increases thousand grain weight in tetraploid and hexaploid wheat through wider and longer grains. Theor Appl Genet 129(6):1099-1112.
-
(2016)
Theor Appl Genet
, vol.129
, Issue.6
, pp. 1099-1112
-
-
Simmonds, J.1
-
32
-
-
84922910242
-
Genome editing in rice and wheat using the CRISPR/Cas system
-
Shan Q, Wang Y, Li J, Gao C (2014) Genome editing in rice and wheat using the CRISPR/Cas system. Nat Protoc 9(10):2395-2410.
-
(2014)
Nat Protoc
, vol.9
, Issue.10
, pp. 2395-2410
-
-
Shan, Q.1
Wang, Y.2
Li, J.3
Gao, C.4
-
34
-
-
84983783288
-
Efficient and transgene-free genome editing in wheat through transient expression of CRISPR/Cas9 DNA or RNA
-
Zhang Y, et al. (2016) Efficient and transgene-free genome editing in wheat through transient expression of CRISPR/Cas9 DNA or RNA. Nat Commun 7:12617.
-
(2016)
Nat Commun
, vol.7
, pp. 12617
-
-
Zhang, Y.1
-
35
-
-
1542723291
-
The wheat VRN2 gene is a flowering repressor down-regulated by vernalization
-
Yan L, et al. (2004) The wheat VRN2 gene is a flowering repressor down-regulated by vernalization. Science 303(5664):1640-1644.
-
(2004)
Science
, vol.303
, Issue.5664
, pp. 1640-1644
-
-
Yan, L.1
-
36
-
-
21544434361
-
The Vrn-H2 locus is a major determinant of flowering time in a facultative x winter growth habit barley (Hordeum vulgare L.) mapping population
-
Karsai I, et al. (2005) The Vrn-H2 locus is a major determinant of flowering time in a facultative x winter growth habit barley (Hordeum vulgare L.) mapping population. Theor Appl Genet 110(8):1458-1466.
-
(2005)
Theor Appl Genet
, vol.110
, Issue.8
, pp. 1458-1466
-
-
Karsai, I.1
-
37
-
-
33847414523
-
Validation of the VRN-H2/VRN-H1 epistatic model in barley reveals that intron length variation in VRN-H1 may account for a continuum of vernalization sensitivity
-
Szucs P, et al. (2007) Validation of the VRN-H2/VRN-H1 epistatic model in barley reveals that intron length variation in VRN-H1 may account for a continuum of vernalization sensitivity. Mol Genet Genomics 277(3):249-261.
-
(2007)
Mol Genet Genomics
, vol.277
, Issue.3
, pp. 249-261
-
-
Szucs, P.1
-
38
-
-
84870265846
-
A physical, genetic and functional sequence assembly of the barley genome
-
Mayer KFX, et al. (2012) A physical, genetic and functional sequence assembly of the barley genome. Nature 491(7426):711-716.
-
(2012)
Nature
, vol.491
, Issue.7426
, pp. 711-716
-
-
Mayer, K.F.X.1
-
39
-
-
24044447664
-
Automated generation of heuristics for biological sequence comparison
-
Slater GSC, Birney E (2005) Automated generation of heuristics for biological sequence comparison. BMC Bioinformatics 6:31.
-
(2005)
BMC Bioinformatics
, vol.6
, pp. 31
-
-
Slater, G.S.C.1
Birney, E.2
-
40
-
-
84879236954
-
Separating homeologs by phasing in the tetraploid wheat transcriptome
-
Krasileva KV, et al. (2013) Separating homeologs by phasing in the tetraploid wheat transcriptome. Genome Biol 14(6):R66.
-
(2013)
Genome Biol
, vol.14
, Issue.6
, pp. R66
-
-
Krasileva, K.V.1
-
41
-
-
68549104404
-
The sequence alignment/map format and SAMtools
-
1000 Genome Project Data Processing Subgroup
-
Li H, et al.; 1000 Genome Project Data Processing Subgroup (2009) The Sequence Alignment/Map format and SAMtools. Bioinformatics 25(16):2078-2079.
-
(2009)
Bioinformatics
, vol.25
, Issue.16
, pp. 2078-2079
-
-
Li, H.1
-
42
-
-
84904390032
-
Structural and functional partitioning of bread wheat chromosome 3B
-
Choulet F, et al. (2014) Structural and functional partitioning of bread wheat chromosome 3B. Science 345(6194):1249721.
-
(2014)
Science
, vol.345
, Issue.6194
, pp. 1249721
-
-
Choulet, F.1
-
43
-
-
84931068082
-
PolyMarker: A fast polyploid primer design pipeline
-
Ramirez-Gonzalez RH, Uauy C, Caccamo M (2015) PolyMarker: A fast polyploid primer design pipeline. Bioinformatics 31(12):2038-2039.
-
(2015)
Bioinformatics
, vol.31
, Issue.12
, pp. 2038-2039
-
-
Ramirez-Gonzalez, R.H.1
Uauy, C.2
Caccamo, M.3
-
44
-
-
84973338712
-
The ensembl variant effect predictor
-
McLaren W, et al. (2016) TheEnsembl Variant Effect Predictor. Genome Biol 17(1):122.
-
(2016)
Genome Biol
, vol.17
, Issue.1
, pp. 122
-
-
McLaren, W.1
-
45
-
-
84929320669
-
RNA-Seq bulked segregant analysis enables the identification of high-resolution genetic markers for breeding in hexaploid wheat
-
Ramirez-Gonzalez RH, et al. (2015) RNA-Seq bulked segregant analysis enables the identification of high-resolution genetic markers for breeding in hexaploid wheat. Plant Biotechnol J 13(5):613-624.
-
(2015)
Plant Biotechnol J
, vol.13
, Issue.5
, pp. 613-624
-
-
Ramirez-Gonzalez, R.H.1
|