메뉴 건너뛰기




Volumn 114, Issue 6, 2017, Pages E913-E921

Erratum: Uncovering hidden variation in polyploid wheat (Proc. Natl. Acad. Sci. U.S.A. (2017) 114 (E913–E921) DOI: 10.1073/pnas.1619268114);Uncovering hidden variation in polyploid wheat

Author keywords

Exome capture; Mutations; Polyploidy; Reverse genetics; Wheat

Indexed keywords

ALLELE; ARTICLE; BIOINFORMATICS; CHROMATIN STRUCTURE; CODON; CONTROLLED STUDY; DNA METHYLATION; EXOME; GENE FREQUENCY; GENE MAPPING; GENE MUTATION; GENE SEQUENCE; GENETIC HETEROGENEITY; GENETIC VARIATION; HEXAPLOIDY; INDUCED MUTATION; MISSENSE MUTATION; MUTAGENESIS; NONHUMAN; PLANT EVOLUTION; PLANT GENETICS; PLANT SEED; PRIORITY JOURNAL; SINGLE NUCLEOTIDE POLYMORPHISM; TETRAPLOIDY; WHEAT; DNA MUTATIONAL ANALYSIS; GENETIC SELECTION; GENETICS; MOLECULAR EVOLUTION; MUTATION; PLANT BREEDING; PLANT GENOME; POLYPLOIDY; PROCEDURES;

EID: 85011706121     PISSN: 00278424     EISSN: 10916490     Source Type: Journal    
DOI: 10.1073/pnas.2313894120     Document Type: Erratum
Times cited : (425)

References (45)
  • 1
    • 34347399464 scopus 로고    scopus 로고
    • Genome plasticity a key factor in the success of polyploid wheat under domestication
    • Dubcovsky J, Dvorak J (2007) Genome plasticity a key factor in the success of polyploid wheat under domestication. Science 316(5833):1862-1866.
    • (2007) Science , vol.316 , Issue.5833 , pp. 1862-1866
    • Dubcovsky, J.1    Dvorak, J.2
  • 2
    • 84875751606 scopus 로고    scopus 로고
    • Production of a high-efficiency TILLING population through polyploidization
    • Tsai H, et al. (2013) Production of a high-efficiency TILLING population through polyploidization. Plant Physiol 161(4):1604-1614.
    • (2013) Plant Physiol , vol.161 , Issue.4 , pp. 1604-1614
    • Tsai, H.1
  • 3
    • 77954182317 scopus 로고    scopus 로고
    • Diversity of agronomic and morphological traits in a mutant population of bread wheat studied in the Healthgrain program
    • Rakszegi M, et al. (2010) Diversity of agronomic and morphological traits in a mutant population of bread wheat studied in the Healthgrain program. Euphytica 174: 409-421.
    • (2010) Euphytica , vol.174 , pp. 409-421
    • Rakszegi, M.1
  • 4
    • 19944416942 scopus 로고    scopus 로고
    • TILLING moves beyond functional genomics into crop improvement
    • Slade AJ, Knauf VC (2005) TILLING moves beyond functional genomics into crop improvement. Transgenic Res 14(2):109-115.
    • (2005) Transgenic Res , vol.14 , Issue.2 , pp. 109-115
    • Slade, A.J.1    Knauf, V.C.2
  • 5
    • 70349608873 scopus 로고    scopus 로고
    • A modified TILLING approach to detect induced mutations in tetraploid and hexaploid wheat
    • Uauy C, et al. (2009) A modified TILLING approach to detect induced mutations in tetraploid and hexaploid wheat. BMC Plant Biol 9:115.
    • (2009) BMC Plant Biol , vol.9 , pp. 115
    • Uauy, C.1
  • 7
    • 77449121614 scopus 로고    scopus 로고
    • Target-enrichment strategies for next-generation sequencing
    • Mamanova L, et al. (2010) Target-enrichment strategies for next-generation sequencing. Nat Methods 7(2):111-118.
    • (2010) Nat Methods , vol.7 , Issue.2 , pp. 111-118
    • Mamanova, L.1
  • 8
    • 84947426368 scopus 로고    scopus 로고
    • Mutation scanning in wheat by exon capture and next-generation sequencing
    • King R, et al. (2015) Mutation scanning in wheat by exon capture and next-generation sequencing. PLoS One 10(9):e0137549.
    • (2015) PLoS One , vol.10 , Issue.9 , pp. e0137549
    • King, R.1
  • 9
    • 84982994492 scopus 로고    scopus 로고
    • A sorghum mutant resource as an efficient platform for gene discovery in grasses
    • Jiao Y, et al. (2016) A sorghum mutant resource as an efficient platform for gene discovery in grasses. Plant Cell 28(7):1551-1562.
    • (2016) Plant Cell , vol.28 , Issue.7 , pp. 1551-1562
    • Jiao, Y.1
  • 11
    • 84904382612 scopus 로고    scopus 로고
    • A chromosome-based draft sequence of the hexaploid bread wheat (Triticum aestivum) genome
    • Mayer KFX, et al. (2014) A chromosome-based draft sequence of the hexaploid bread wheat (Triticum aestivum) genome. Science 345(6194):1251788.
    • (2014) Science , vol.345 , Issue.6194 , pp. 1251788
    • Mayer, K.F.X.1
  • 12
    • 84939199382 scopus 로고    scopus 로고
    • A haplotype map of allohexaploid wheat reveals distinct patterns of selection on homoeologous genomes
    • Jordan KW, et al. (2015) A haplotype map of allohexaploid wheat reveals distinct patterns of selection on homoeologous genomes. Genome Biol 16:48.
    • (2015) Genome Biol , vol.16 , pp. 48
    • Jordan, K.W.1
  • 13
    • 84866280223 scopus 로고    scopus 로고
    • Transcriptome-scale homoeolog-specific transcript assemblies of bread wheat
    • Schreiber AW, et al. (2012) Transcriptome-scale homoeolog-specific transcript assemblies of bread wheat. BMC Genomics 13:492.
    • (2012) BMC Genomics , vol.13 , pp. 492
    • Schreiber, A.W.1
  • 14
    • 84928229733 scopus 로고    scopus 로고
    • TILLING by sequencing to identify induced mutations in stress resistance genes of peanut (Arachis hypogaea)
    • Guo Y, Abernathy B, Zeng Y, Ozias-Akins P (2015) TILLING by sequencing to identify induced mutations in stress resistance genes of peanut (Arachis hypogaea). BMC Genomics 16:157.
    • (2015) BMC Genomics , vol.16 , pp. 157
    • Guo, Y.1    Abernathy, B.2    Zeng, Y.3    Ozias-Akins, P.4
  • 15
    • 84856777872 scopus 로고    scopus 로고
    • Evolutionary and comparative analyses of the soybean genome
    • Cannon SB, Shoemaker RC (2012) Evolutionary and comparative analyses of the soybean genome. Breed Sci 61(5):437-444.
    • (2012) Breed Sci , vol.61 , Issue.5 , pp. 437-444
    • Cannon, S.B.1    Shoemaker, R.C.2
  • 16
    • 84901455676 scopus 로고    scopus 로고
    • Efficient genome-wide detection and cataloging of EMSinduced mutations using exome capture and next-generation sequencing
    • Henry IM, et al. (2014) Efficient genome-wide detection and cataloging of EMSinduced mutations using exome capture and next-generation sequencing. Plant Cell 26(4):1382-1397.
    • (2014) Plant Cell , vol.26 , Issue.4 , pp. 1382-1397
    • Henry, I.M.1
  • 17
    • 0043122919 scopus 로고    scopus 로고
    • SIFT: Predicting amino acid changes that affect protein function
    • Ng PC, Henikoff S (2003) SIFT: Predicting amino acid changes that affect protein function. Nucleic Acids Res 31(13):3812-3814.
    • (2003) Nucleic Acids Res , vol.31 , Issue.13 , pp. 3812-3814
    • Ng, P.C.1    Henikoff, S.2
  • 18
    • 84906776329 scopus 로고    scopus 로고
    • Registration of durum wheat germplasm lines with combined mutations in SBEIIa and SBEIIb genes conferring increased amylose and resistant starch
    • Hazard B, Zhang X, Naemeh M, Dubcovsky J (2014) Registration of durum wheat germplasm lines with combined mutations in SBEIIa and SBEIIb genes conferring increased amylose and resistant starch. J Plant Regist 8(3):334-338.
    • (2014) J Plant Regist , vol.8 , Issue.3 , pp. 334-338
    • Hazard, B.1    Zhang, X.2    Naemeh, M.3    Dubcovsky, J.4
  • 19
    • 84964066315 scopus 로고    scopus 로고
    • Registration of common wheat germplasm with mutations in SBEII genes conferring increased grain amylose and resistant starch content
    • Schönhofen A, Hazard B, Zhang X, Dubcovsky J (2016) Registration of common wheat germplasm with mutations in SBEII genes conferring increased grain amylose and resistant starch content. J Plant Regist 10(2):200-205.
    • (2016) J Plant Regist , vol.10 , Issue.2 , pp. 200-205
    • Schönhofen, A.1    Hazard, B.2    Zhang, X.3    Dubcovsky, J.4
  • 20
    • 84967329155 scopus 로고    scopus 로고
    • Resistant starch as a bioactive compound in colorectal cancer prevention
    • eds Watson RR, Preedy VR Academic, Cambridge, UK
    • Amini A, Khalili L, Keshtiban AK, Homayouni A (2016) Resistant starch as a bioactive compound in colorectal cancer prevention. Bioactive Foods in Health Promotion, eds Watson RR, Preedy VR (Academic, Cambridge, UK), pp 773-780.
    • (2016) Bioactive Foods in Health Promotion , pp. 773-780
    • Amini, A.1    Khalili, L.2    Keshtiban, A.K.3    Homayouni, A.4
  • 21
    • 27244434038 scopus 로고    scopus 로고
    • Insulin-sensitizing effects of dietary resistant starch and effects on skeletal muscle and adipose tissue metabolism
    • Robertson MD, Bickerton AS, Dennis AL, Vidal H, Frayn KN (2005) Insulin-sensitizing effects of dietary resistant starch and effects on skeletal muscle and adipose tissue metabolism. Am J Clin Nutr 82(3):559-567.
    • (2005) Am J Clin Nutr , vol.82 , Issue.3 , pp. 559-567
    • Robertson, M.D.1    Bickerton, A.S.2    Dennis, A.L.3    Vidal, H.4    Frayn, K.N.5
  • 22
    • 85022172646 scopus 로고    scopus 로고
    • The relationship between resistant starch and glycemic control: A review on current evidence and possible mechanisms
    • Wong THT, Louie JCY (2016) The relationship between resistant starch and glycemic control: A review on current evidence and possible mechanisms. Starke 68:1-9.
    • (2016) Starke , vol.68 , pp. 1-9
    • Wong, T.H.T.1    Louie, J.C.Y.2
  • 23
    • 84963744973 scopus 로고    scopus 로고
    • Genetic and physical mapping of the earliness per se locus Eps-Am1 in Triticum monococcum identifies EARLY FLOWERING 3 (ELF3) as a candidate gene
    • Alvarez MA, Tranquilli G, Lewis S, Kippes N, Dubcovsky J (2016) Genetic and physical mapping of the earliness per se locus Eps-Am1 in Triticum monococcum identifies EARLY FLOWERING 3 (ELF3) as a candidate gene. Funct Integr Genomics 16(4):365-382.
    • (2016) Funct Integr Genomics , vol.16 , Issue.4 , pp. 365-382
    • Alvarez, M.A.1    Tranquilli, G.2    Lewis, S.3    Kippes, N.4    Dubcovsky, J.5
  • 24
    • 84872046553 scopus 로고    scopus 로고
    • Wheat TILLING mutants show that the vernalization gene VRN1 down-regulates the flowering repressor VRN2 in leaves but is not essential for flowering
    • Chen A, Dubcovsky J (2012) Wheat TILLING mutants show that the vernalization gene VRN1 down-regulates the flowering repressor VRN2 in leaves but is not essential for flowering. PLoS Genet 8(12):e1003134.
    • (2012) PLoS Genet , vol.8 , Issue.12 , pp. e1003134
    • Chen, A.1    Dubcovsky, J.2
  • 25
    • 84904297375 scopus 로고    scopus 로고
    • PHYTOCHROME C plays a major role in the acceleration of wheat flowering under long-day photoperiod
    • Chen A, et al. (2014) PHYTOCHROME C plays a major role in the acceleration of wheat flowering under long-day photoperiod. Proc Natl Acad Sci USA 111(28):10037-10044.
    • (2014) Proc Natl Acad Sci USA , vol.111 , Issue.28 , pp. 10037-10044
    • Chen, A.1
  • 26
    • 84964509930 scopus 로고    scopus 로고
    • Development and characterization of a spring hexaploid wheat line with no functional VRN2 genes
    • Kippes N, Chen A, Zhang X, Lukaszewski AJ, Dubcovsky J (2016) Development and characterization of a spring hexaploid wheat line with no functional VRN2 genes. Theor Appl Genet 129(7):1417-1428.
    • (2016) Theor Appl Genet , vol.129 , Issue.7 , pp. 1417-1428
    • Kippes, N.1    Chen, A.2    Zhang, X.3    Lukaszewski, A.J.4    Dubcovsky, J.5
  • 27
    • 84975230958 scopus 로고    scopus 로고
    • RNA-seq studies using wheat PHYTOCHROME B and PHYTOCHROME C mutants reveal shared and specific functions in the regulation of flowering and shade-Avoidance pathways
    • Pearce S, Kippes N, Chen A, Debernardi JM, Dubcovsky J (2016) RNA-seq studies using wheat PHYTOCHROME B and PHYTOCHROME C mutants reveal shared and specific functions in the regulation of flowering and shade-Avoidance pathways. BMC Plant Biol 16(1):141.
    • (2016) BMC Plant Biol , vol.16 , Issue.1 , pp. 141
    • Pearce, S.1    Kippes, N.2    Chen, A.3    Debernardi, J.M.4    Dubcovsky, J.5
  • 28
    • 84899426298 scopus 로고    scopus 로고
    • Characterization of FLOWERING LOCUS T1 (FT1) gene in Brachypodium and wheat
    • Lv B, et al. (2014) Characterization of FLOWERING LOCUS T1 (FT1) gene in Brachypodium and wheat. PLoS One 9(4):e94171.
    • (2014) PLoS One , vol.9 , Issue.4 , pp. e94171
    • Lv, B.1
  • 29
    • 85011685460 scopus 로고    scopus 로고
    • 2015 Outlook of the U.S. And World Wheat Industries, 2015-2024. Agribusiness & Applied Economics
    • North Dakota State Univ, Fargo, ND
    • Taylor RD, Koo WW (2015) 2015 Outlook of the U.S. and World Wheat Industries, 2015-2024. Agribusiness & Applied Economics. Agribusiness & Applied Economics Report 738 (North Dakota State Univ, Fargo, ND), p 23.
    • (2015) Agribusiness & Applied Economics Report 738 , pp. 23
    • Taylor, R.D.1    Koo, W.W.2
  • 30
    • 84944447344 scopus 로고    scopus 로고
    • Mutations in durum wheat SBEII genes affect grain yield components, quality, and fermentation responses in rats
    • Hazard B, et al. (2015) Mutations in durum wheat SBEII genes affect grain yield components, quality, and fermentation responses in rats. Crop Sci 55(6):2813-2825.
    • (2015) Crop Sci , vol.55 , Issue.6 , pp. 2813-2825
    • Hazard, B.1
  • 31
    • 84958746914 scopus 로고    scopus 로고
    • A splice acceptor site mutation in TaGW2-A1 increases thousand grain weight in tetraploid and hexaploid wheat through wider and longer grains
    • Simmonds J, et al. (2016) A splice acceptor site mutation in TaGW2-A1 increases thousand grain weight in tetraploid and hexaploid wheat through wider and longer grains. Theor Appl Genet 129(6):1099-1112.
    • (2016) Theor Appl Genet , vol.129 , Issue.6 , pp. 1099-1112
    • Simmonds, J.1
  • 32
    • 84922910242 scopus 로고    scopus 로고
    • Genome editing in rice and wheat using the CRISPR/Cas system
    • Shan Q, Wang Y, Li J, Gao C (2014) Genome editing in rice and wheat using the CRISPR/Cas system. Nat Protoc 9(10):2395-2410.
    • (2014) Nat Protoc , vol.9 , Issue.10 , pp. 2395-2410
    • Shan, Q.1    Wang, Y.2    Li, J.3    Gao, C.4
  • 34
    • 84983783288 scopus 로고    scopus 로고
    • Efficient and transgene-free genome editing in wheat through transient expression of CRISPR/Cas9 DNA or RNA
    • Zhang Y, et al. (2016) Efficient and transgene-free genome editing in wheat through transient expression of CRISPR/Cas9 DNA or RNA. Nat Commun 7:12617.
    • (2016) Nat Commun , vol.7 , pp. 12617
    • Zhang, Y.1
  • 35
    • 1542723291 scopus 로고    scopus 로고
    • The wheat VRN2 gene is a flowering repressor down-regulated by vernalization
    • Yan L, et al. (2004) The wheat VRN2 gene is a flowering repressor down-regulated by vernalization. Science 303(5664):1640-1644.
    • (2004) Science , vol.303 , Issue.5664 , pp. 1640-1644
    • Yan, L.1
  • 36
    • 21544434361 scopus 로고    scopus 로고
    • The Vrn-H2 locus is a major determinant of flowering time in a facultative x winter growth habit barley (Hordeum vulgare L.) mapping population
    • Karsai I, et al. (2005) The Vrn-H2 locus is a major determinant of flowering time in a facultative x winter growth habit barley (Hordeum vulgare L.) mapping population. Theor Appl Genet 110(8):1458-1466.
    • (2005) Theor Appl Genet , vol.110 , Issue.8 , pp. 1458-1466
    • Karsai, I.1
  • 37
    • 33847414523 scopus 로고    scopus 로고
    • Validation of the VRN-H2/VRN-H1 epistatic model in barley reveals that intron length variation in VRN-H1 may account for a continuum of vernalization sensitivity
    • Szucs P, et al. (2007) Validation of the VRN-H2/VRN-H1 epistatic model in barley reveals that intron length variation in VRN-H1 may account for a continuum of vernalization sensitivity. Mol Genet Genomics 277(3):249-261.
    • (2007) Mol Genet Genomics , vol.277 , Issue.3 , pp. 249-261
    • Szucs, P.1
  • 38
    • 84870265846 scopus 로고    scopus 로고
    • A physical, genetic and functional sequence assembly of the barley genome
    • Mayer KFX, et al. (2012) A physical, genetic and functional sequence assembly of the barley genome. Nature 491(7426):711-716.
    • (2012) Nature , vol.491 , Issue.7426 , pp. 711-716
    • Mayer, K.F.X.1
  • 39
    • 24044447664 scopus 로고    scopus 로고
    • Automated generation of heuristics for biological sequence comparison
    • Slater GSC, Birney E (2005) Automated generation of heuristics for biological sequence comparison. BMC Bioinformatics 6:31.
    • (2005) BMC Bioinformatics , vol.6 , pp. 31
    • Slater, G.S.C.1    Birney, E.2
  • 40
    • 84879236954 scopus 로고    scopus 로고
    • Separating homeologs by phasing in the tetraploid wheat transcriptome
    • Krasileva KV, et al. (2013) Separating homeologs by phasing in the tetraploid wheat transcriptome. Genome Biol 14(6):R66.
    • (2013) Genome Biol , vol.14 , Issue.6 , pp. R66
    • Krasileva, K.V.1
  • 41
    • 68549104404 scopus 로고    scopus 로고
    • The sequence alignment/map format and SAMtools
    • 1000 Genome Project Data Processing Subgroup
    • Li H, et al.; 1000 Genome Project Data Processing Subgroup (2009) The Sequence Alignment/Map format and SAMtools. Bioinformatics 25(16):2078-2079.
    • (2009) Bioinformatics , vol.25 , Issue.16 , pp. 2078-2079
    • Li, H.1
  • 42
    • 84904390032 scopus 로고    scopus 로고
    • Structural and functional partitioning of bread wheat chromosome 3B
    • Choulet F, et al. (2014) Structural and functional partitioning of bread wheat chromosome 3B. Science 345(6194):1249721.
    • (2014) Science , vol.345 , Issue.6194 , pp. 1249721
    • Choulet, F.1
  • 43
    • 84931068082 scopus 로고    scopus 로고
    • PolyMarker: A fast polyploid primer design pipeline
    • Ramirez-Gonzalez RH, Uauy C, Caccamo M (2015) PolyMarker: A fast polyploid primer design pipeline. Bioinformatics 31(12):2038-2039.
    • (2015) Bioinformatics , vol.31 , Issue.12 , pp. 2038-2039
    • Ramirez-Gonzalez, R.H.1    Uauy, C.2    Caccamo, M.3
  • 44
    • 84973338712 scopus 로고    scopus 로고
    • The ensembl variant effect predictor
    • McLaren W, et al. (2016) TheEnsembl Variant Effect Predictor. Genome Biol 17(1):122.
    • (2016) Genome Biol , vol.17 , Issue.1 , pp. 122
    • McLaren, W.1
  • 45
    • 84929320669 scopus 로고    scopus 로고
    • RNA-Seq bulked segregant analysis enables the identification of high-resolution genetic markers for breeding in hexaploid wheat
    • Ramirez-Gonzalez RH, et al. (2015) RNA-Seq bulked segregant analysis enables the identification of high-resolution genetic markers for breeding in hexaploid wheat. Plant Biotechnol J 13(5):613-624.
    • (2015) Plant Biotechnol J , vol.13 , Issue.5 , pp. 613-624
    • Ramirez-Gonzalez, R.H.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.