메뉴 건너뛰기




Volumn 9, Issue 1, 2017, Pages

S2RSLDB: A comprehensive manually curated, internet-accessible database of the sigma-2 receptor selective ligands

Author keywords

2D plot; 3D plot; Central nervous system multiparameter optimization; Drug design; Lipinski's rule of five; Online ligand database; S2RSLDB; Sigma receptor; Sigma 2 receptor; Structure search

Indexed keywords


EID: 85010009393     PISSN: None     EISSN: 17582946     Source Type: Journal    
DOI: 10.1186/s13321-017-0191-5     Document Type: Article
Times cited : (29)

References (59)
  • 4
    • 35549006797 scopus 로고    scopus 로고
    • Sigma-1 receptor chaperones at the ER-mitochondrion interface regulate Ca(2 +) signaling and cell survival
    • 1:CAS:528:DC%2BD2sXhtlWitrzK
    • Hayashi T, Su TP (2007) Sigma-1 receptor chaperones at the ER-mitochondrion interface regulate Ca(2 +) signaling and cell survival. Cell 131(3):596-610
    • (2007) Cell , vol.131 , Issue.3 , pp. 596-610
    • Hayashi, T.1    Su, T.P.2
  • 5
    • 0030582657 scopus 로고    scopus 로고
    • Cloning and functional expression of the human type 1 sigma receptor (hSigmaR1)
    • 1:CAS:528:DyaK28Xns1ehtrw%3D
    • Kekuda R, Prasad PD, Fei YJ, Leibach FH, Ganapathy V (1996) Cloning and functional expression of the human type 1 sigma receptor (hSigmaR1). Biochem Biophys Res Commun 229(2):553-558
    • (1996) Biochem Biophys Res Commun , vol.229 , Issue.2 , pp. 553-558
    • Kekuda, R.1    Prasad, P.D.2    Fei, Y.J.3    Leibach, F.H.4    Ganapathy, V.5
  • 7
    • 84958254355 scopus 로고    scopus 로고
    • Biochemical pharmacology of the sigma-1 receptor
    • 1:CAS:528:DC%2BC28XisF2nsrs%3D
    • Chu UB, Ruoho AE (2016) Biochemical pharmacology of the sigma-1 receptor. Mol Pharmacol 89(1):142-153
    • (2016) Mol Pharmacol , vol.89 , Issue.1 , pp. 142-153
    • Chu, U.B.1    Ruoho, A.E.2
  • 8
    • 84931275455 scopus 로고    scopus 로고
    • Sigma-2 receptor ligands: Neurobiological effects
    • 1:CAS:528:DC%2BC2MXjslCnsLs%3D
    • Guo L, Zhen X (2015) Sigma-2 receptor ligands: neurobiological effects. Curr Med Chem 22(8):989-1003
    • (2015) Curr Med Chem , vol.22 , Issue.8 , pp. 989-1003
    • Guo, L.1    Zhen, X.2
  • 9
    • 0028180570 scopus 로고
    • Rat liver and kidney contain high densities of sigma 1 and sigma 2 receptors: Characterization by ligand binding and photoaffinity labeling
    • 1:CAS:528:DyaK2cXkslelsbc%3D
    • Hellewell SB, Bruce A, Feinstein G, Orringer J, Williams W, Bowen WD (1994) Rat liver and kidney contain high densities of sigma 1 and sigma 2 receptors: characterization by ligand binding and photoaffinity labeling. Eur J Pharmacol 268(1):9-18
    • (1994) Eur J Pharmacol , vol.268 , Issue.1 , pp. 9-18
    • Hellewell, S.B.1    Bruce, A.2    Feinstein, G.3    Orringer, J.4    Williams, W.5    Bowen, W.D.6
  • 10
    • 84958834594 scopus 로고    scopus 로고
    • The sigma-2 receptor and progesterone receptor membrane component 1 are different binding sites derived from independent genes
    • Chu UB, Mavlyutov TA, Chu ML, Yang H, Schulman A, Mesangeau C, McCurdy CR, Guo LW, Ruoho AE (2015) The sigma-2 receptor and progesterone receptor membrane component 1 are different binding sites derived from independent genes. EBioMedicine 2(11):1806-1813
    • (2015) EBioMedicine , vol.2 , Issue.11 , pp. 1806-1813
    • Chu, U.B.1    Mavlyutov, T.A.2    Chu, M.L.3    Yang, H.4    Schulman, A.5    Mesangeau, C.6    McCurdy, C.R.7    Guo, L.W.8    Ruoho, A.E.9
  • 12
    • 77955360958 scopus 로고    scopus 로고
    • Synthesis and resolution of cis-(±)-methyl (1R,2S/1S,2R)-2-[(4-hydroxy-4-phenylpiperidin-1-yl)methyl]-1-(4-methylphenyl)cycl opropanecarboxylate [(±)-PPCC)]: New sigma receptor ligands with neuroprotective effect
    • 1:CAS:528:DC%2BC3cXovVCiu7Y%3D
    • Prezzavento O, Campisi A, Parenti C, Ronsisvalle S, Arico G, Arena E, Pistolozzi M, Scoto GM, Bertucci C, Vanella A, Ronsisvalle G (2010) Synthesis and resolution of cis-(±)-methyl (1R,2S/1S,2R)-2-[(4-hydroxy-4-phenylpiperidin-1-yl)methyl]-1-(4-methylphenyl)cycl opropanecarboxylate [(±)-PPCC)]: new sigma receptor ligands with neuroprotective effect. J Med Chem 53(15):5881-5885
    • (2010) J Med Chem , vol.53 , Issue.15 , pp. 5881-5885
    • Prezzavento, O.1    Campisi, A.2    Parenti, C.3    Ronsisvalle, S.4    Arico, G.5    Arena, E.6    Pistolozzi, M.7    Scoto, G.M.8    Bertucci, C.9    Vanella, A.10    Ronsisvalle, G.11
  • 13
    • 0036972396 scopus 로고    scopus 로고
    • Improving Alzheimer's disease-related cognitive deficits with sigma1 receptor agonists
    • 1:CAS:528:DC%2BD3sXhsFOls7Y%3D
    • Maurice T (2002) Improving Alzheimer's disease-related cognitive deficits with sigma1 receptor agonists. Drug News Perspect 15(10):617-625
    • (2002) Drug News Perspect , vol.15 , Issue.10 , pp. 617-625
    • Maurice, T.1
  • 14
    • 84924050942 scopus 로고    scopus 로고
    • Sigma-1 receptor: The novel intracellular target of neuropsychotherapeutic drugs
    • 1:CAS:528:DC%2BC28Xislaks70%3D
    • Hayashi T (2015) Sigma-1 receptor: the novel intracellular target of neuropsychotherapeutic drugs. J Pharmacol Sci 127(1):2-5
    • (2015) J Pharmacol Sci , vol.127 , Issue.1 , pp. 2-5
    • Hayashi, T.1
  • 17
    • 84937718662 scopus 로고    scopus 로고
    • Sigma-1 receptors and animal studies centered on pain and analgesia
    • 1:CAS:528:DC%2BC2MXht1Wnu7rN
    • Davis MP (2015) Sigma-1 receptors and animal studies centered on pain and analgesia. Expert Opin Drug Discov 10(8):885-900
    • (2015) Expert Opin Drug Discov , vol.10 , Issue.8 , pp. 885-900
    • Davis, M.P.1
  • 20
    • 0030607989 scopus 로고    scopus 로고
    • Regulation of [3H] dopamine release from mesolimbic and mesocortical areas of Guinea pig brain by sigma receptors
    • 1:STN:280:DyaK2s7kvVGisw%3D%3D
    • Weatherspoon JK, Gonzalez-Alvear GM, Frank AR, Werling LL (1996) Regulation of [3H] dopamine release from mesolimbic and mesocortical areas of guinea pig brain by sigma receptors. Schizophr Res 21(1):51-62
    • (1996) Schizophr Res , vol.21 , Issue.1 , pp. 51-62
    • Weatherspoon, J.K.1    Gonzalez-Alvear, G.M.2    Frank, A.R.3    Werling, L.L.4
  • 21
    • 70349116879 scopus 로고    scopus 로고
    • The pharmacology of sigma-1 receptors
    • 1:CAS:528:DC%2BD1MXhtFGktLnM
    • Maurice T, Su TP (2009) The pharmacology of sigma-1 receptors. Pharmacol Ther 124(2):195-206
    • (2009) Pharmacol Ther , vol.124 , Issue.2 , pp. 195-206
    • Maurice, T.1    Su, T.P.2
  • 23
    • 84884480040 scopus 로고    scopus 로고
    • The sigma2 receptor: A novel protein for the imaging and treatment of cancer
    • 1:CAS:528:DC%2BC3sXovFWmtr0%3D
    • Mach RH, Zeng C, Hawkins WG (2013) The sigma2 receptor: a novel protein for the imaging and treatment of cancer. J Med Chem 56(18):7137-7160
    • (2013) J Med Chem , vol.56 , Issue.18 , pp. 7137-7160
    • Mach, R.H.1    Zeng, C.2    Hawkins, W.G.3
  • 24
    • 25444483322 scopus 로고    scopus 로고
    • Effective tumor cell death by sigma-2 receptor ligand siramesine involves lysosomal leakage and oxidative stress
    • 1:CAS:528:DC%2BD2MXhtVKiu7rP
    • Ostenfeld MS, Fehrenbacher N, Hoyer-Hansen M, Thomsen C, Farkas T, Jaattela M (2005) Effective tumor cell death by sigma-2 receptor ligand siramesine involves lysosomal leakage and oxidative stress. Cancer Res 65(19):8975-8983
    • (2005) Cancer Res , vol.65 , Issue.19 , pp. 8975-8983
    • Ostenfeld, M.S.1    Fehrenbacher, N.2    Hoyer-Hansen, M.3    Thomsen, C.4    Farkas, T.5    Jaattela, M.6
  • 27
    • 0036141493 scopus 로고    scopus 로고
    • Sigma-2 receptor agonists activate a novel apoptotic pathway and potentiate antineoplastic drugs in breast tumor cell lines
    • 1:CAS:528:DC%2BD38XntV2gug%3D%3D
    • Crawford KW, Bowen WD (2002) Sigma-2 receptor agonists activate a novel apoptotic pathway and potentiate antineoplastic drugs in breast tumor cell lines. Cancer Res 62(1):313-322
    • (2002) Cancer Res , vol.62 , Issue.1 , pp. 313-322
    • Crawford, K.W.1    Bowen, W.D.2
  • 28
  • 29
    • 0032751660 scopus 로고    scopus 로고
    • Effect of ploidy, recruitment, environmental factors, and tamoxifen treatment on the expression of sigma-2 receptors in proliferating and quiescent tumour cells
    • 1:CAS:528:DyaK1MXnvFSjs74%3D
    • Al-Nabulsi I, Mach RH, Wang LM, Wallen CA, Keng PC, Sten K, Childers SR, Wheeler KT (1999) Effect of ploidy, recruitment, environmental factors, and tamoxifen treatment on the expression of sigma-2 receptors in proliferating and quiescent tumour cells. Br J Cancer 81(6):925-933
    • (1999) Br J Cancer , vol.81 , Issue.6 , pp. 925-933
    • Al-Nabulsi, I.1    Mach, R.H.2    Wang, L.M.3    Wallen, C.A.4    Keng, P.C.5    Sten, K.6    Childers, S.R.7    Wheeler, K.T.8
  • 31
    • 84924094144 scopus 로고    scopus 로고
    • Principles in the design of ligand-targeted cancer therapeutics and imaging agents
    • 1:CAS:528:DC%2BC2MXjtVylsb4%3D
    • Srinivasarao M, Galliford CV, Low PS (2015) Principles in the design of ligand-targeted cancer therapeutics and imaging agents. Nat Rev Drug Discov 14(3):203-219
    • (2015) Nat Rev Drug Discov , vol.14 , Issue.3 , pp. 203-219
    • Srinivasarao, M.1    Galliford, C.V.2    Low, P.S.3
  • 32
    • 84952845629 scopus 로고    scopus 로고
    • The pre-clinical characterization of an alpha-emitting sigma-2 receptor targeted radiotherapeutic
    • 1:CAS:528:DC%2BC2MXhvVOqsr3E
    • Makvandi M, Lieberman BP, LeGeyt B, Hou C, Mankoff DA, Mach RH, Pryma DA (2016) The pre-clinical characterization of an alpha-emitting sigma-2 receptor targeted radiotherapeutic. Nucl Med Biol 43(1):35-41
    • (2016) Nucl Med Biol , vol.43 , Issue.1 , pp. 35-41
    • Makvandi, M.1    Lieberman, B.P.2    LeGeyt, B.3    Hou, C.4    Mankoff, D.A.5    Mach, R.H.6    Pryma, D.A.7
  • 35
    • 85010005709 scopus 로고    scopus 로고
    • ClinicalTrials.gov. NLM Identifier: NCT02284919
    • 18F]ISO-1 PET/CT in Breast Cancer. In: ClinicalTrials.gov. https://clinicaltrials.gov/ct2/show/NCT02284919. NLM Identifier: NCT02284919
    • 18F]ISO-1 PET/CT in Breast Cancer
  • 36
    • 85009955955 scopus 로고    scopus 로고
    • ClinicalTrials.gov NLM Identifier: NCT00968656
    • 18F]ISO-1 (FISO PET/CT). In: ClinicalTrials.gov. https://clinicaltrials.gov/ct2/show/NCT00968656. NLM Identifier: NCT00968656
    • 18F]ISO-1 (FISO PET/CT)
  • 37
    • 85009946967 scopus 로고    scopus 로고
    • Pubmed
    • Pubmed. http://www.ncbi.nlm.nih.gov/pubmed
  • 38
    • 85010005701 scopus 로고    scopus 로고
    • Scifinder
    • Scifinder. https://www.cas.org/products/scifinder
  • 40
    • 85009975254 scopus 로고    scopus 로고
    • ChEMBL-21
    • ChEMBL-21. https://www.ebi.ac.uk/chembl
  • 41
    • 85009946957 scopus 로고    scopus 로고
    • PubChem
    • PubChem. https://pubchem.ncbi.nlm.nih.gov
  • 42
    • 85009965533 scopus 로고    scopus 로고
    • PDBbinding
    • PDBbinding. http://www.pdbbind.org
  • 43
    • 85009979984 scopus 로고    scopus 로고
    • ChemSpider
    • ChemSpider. www.chemspider.com
  • 45
    • 65249117009 scopus 로고    scopus 로고
    • Optical structure recognition software to recover chemical information: OSRA, an open source solution
    • 1:CAS:528:DC%2BD1MXhvFGnt7k%3D
    • Filippov IV, Nicklaus MC (2009) Optical structure recognition software to recover chemical information: OSRA, an open source solution. J Chem Inf Model 49(3):740-743
    • (2009) J Chem Inf Model , vol.49 , Issue.3 , pp. 740-743
    • Filippov, I.V.1    Nicklaus, M.C.2
  • 47
    • 84984671162 scopus 로고    scopus 로고
    • Sigma receptor binding assays
    • Chu UB, Ruoho AE (2015) Sigma receptor binding assays. Curr Protoc Pharmacol 71(1.34):1-21
    • (2015) Curr Protoc Pharmacol , vol.71 , Issue.1-34 , pp. 1-21
    • Chu, U.B.1    Ruoho, A.E.2
  • 48
    • 41249091782 scopus 로고    scopus 로고
    • Pybel: A python wrapper for the OpenBabel cheminformatics toolkit
    • O'Boyle NM, Morley C, Hutchison GR (2008) Pybel: a python wrapper for the OpenBabel cheminformatics toolkit. Chem Cent J 2:5
    • (2008) Chem Cent J , vol.2 , pp. 5
    • O'Boyle, N.M.1    Morley, C.2    Hutchison, G.R.3
  • 49
    • 84879938724 scopus 로고    scopus 로고
    • JSME: A free molecule editor in JavaScript
    • 1:CAS:528:DC%2BC3sXptlyjtrk%3D
    • Bienfait B, Ertl P (2013) JSME: a free molecule editor in JavaScript. J Cheminform 5:24
    • (2013) J Cheminform , vol.5 , pp. 24
    • Bienfait, B.1    Ertl, P.2
  • 50
    • 85009990142 scopus 로고    scopus 로고
    • Indigo Toolkit
    • Indigo Toolkit. http://lifescience.opensource.epam.com/
  • 51
    • 84930655650 scopus 로고    scopus 로고
    • Why is Tanimoto index an appropriate choice for fingerprint-based similarity calculations?
    • Bajusz D, Racz A, Heberger K (2015) Why is Tanimoto index an appropriate choice for fingerprint-based similarity calculations? J Cheminform 7:20
    • (2015) J Cheminform , vol.7 , pp. 20
    • Bajusz, D.1    Racz, A.2    Heberger, K.3
  • 52
    • 84867453935 scopus 로고    scopus 로고
    • Systematic benchmark of substructure search in molecular graphs - From Ullmann to VF2
    • 1:CAS:528:DC%2BC3sXjsVaqsb4%3D
    • Ehrlich HC, Rarey M (2012) Systematic benchmark of substructure search in molecular graphs - From Ullmann to VF2. J Cheminform 4(1):13
    • (2012) J Cheminform , vol.4 , Issue.1 , pp. 13
    • Ehrlich, H.C.1    Rarey, M.2
  • 54
    • 0035289779 scopus 로고    scopus 로고
    • Experimental and computational approaches to estimate solubility and permeability in drug discovery and development settings
    • 1:CAS:528:DC%2BD3MXitVOhs7o%3D
    • Lipinski CA, Lombardo F, Dominy BW, Feeney PJ (2001) Experimental and computational approaches to estimate solubility and permeability in drug discovery and development settings. Adv Drug Deliv Rev 46(1-3):3-26
    • (2001) Adv Drug Deliv Rev , vol.46 , Issue.1-3 , pp. 3-26
    • Lipinski, C.A.1    Lombardo, F.2    Dominy, B.W.3    Feeney, P.J.4
  • 55
    • 77953675980 scopus 로고    scopus 로고
    • Moving beyond rules: The development of a central nervous system multiparameter optimization (CNS MPO) approach to enable alignment of druglike properties
    • 1:CAS:528:DC%2BC3cXjvVejtr8%3D
    • Wager TT, Hou X, Verhoest PR, Villalobos A (2010) Moving beyond rules: the development of a central nervous system multiparameter optimization (CNS MPO) approach to enable alignment of druglike properties. ACS Chem Neurosci 1(6):435-449
    • (2010) ACS Chem Neurosci , vol.1 , Issue.6 , pp. 435-449
    • Wager, T.T.1    Hou, X.2    Verhoest, P.R.3    Villalobos, A.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.