DNA-wrapped multi-walled carbon nanotube modified electrochemical biosensor for the detection of Escherichia coli from real samples

Talanta

Volumn 166, Issue , 2017, Pages 27-35

  Ozkan Ariksoysal, Dilsat ^a   Kayran, Yasin Ugur ^a   Yilmaz, Fethiye Ferda ^a   Ciucu, Anton Alexandru ^b   David, Iulia Gabriela ^b   David, Vasile ^b   Hosgor Limoncu, Mine ^a   Ozsoz, Mehmet ^a  

^a EGE UNIVERSITY   (Turkey)

^b UNIVERSITY OF BUCHAREST   (Romania)

Author keywords

DNA Hybridization; DNA wrapped multi walled carbon nanotubes; Electrochemical DNA biosensor; Escherichia coli detection; Pencil graphite electrode (PGE); Polymerase chain reaction (PCR) amplified real samples

Indexed keywords

BIOSENSORS; CHAINS; DNA; ELECTROCHEMICAL ELECTRODES; ESCHERICHIA COLI; GRAPHITE; GRAPHITE ELECTRODES; MULTIWALLED CARBON NANOTUBES (MWCN); VOLTAMMETRY; YARN;

DNA HYBRIDIZATION; DNA-WRAPPED; ELECTROCHEMICAL DNA BIOSENSORS; PENCIL GRAPHITE ELECTRODE; REAL SAMPLES;

POLYMERASE CHAIN REACTION;

BACTERIAL DNA; CARBON NANOTUBE; CHITOSAN;

CHEMISTRY; DEVICES; ELECTROCHEMISTRY; ELECTRODE; ESCHERICHIA COLI; GENETIC PROCEDURES; GENETICS; ISOLATION AND PURIFICATION; NUCLEIC ACID HYBRIDIZATION; POLYMERASE CHAIN REACTION; PROCEDURES; STAPHYLOCOCCUS AUREUS;

BIOSENSING TECHNIQUES; CHITOSAN; DNA, BACTERIAL; ELECTROCHEMISTRY; ELECTRODES; ESCHERICHIA COLI; NANOTUBES, CARBON; NUCLEIC ACID HYBRIDIZATION; POLYMERASE CHAIN REACTION; STAPHYLOCOCCUS AUREUS;

EID: 85009517281     PISSN: 00399140     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.talanta.2017.01.005     Document Type: Article

References (63)

1. [1] Lazerges, M., Bedioui, F., Anal. Bioanal. Chem. 405 (2013), 3705–3714.
2. [2] Paniel, N., Baudart, J., Hayat, A., Barthelmebs, L., Methods 64 (2013), 229–240.
3. [3] Chen, X., Gan, M., Xu, H., Chen, F., Ming, X., Xu, H., Wie, H., Xu, F., Liu, C., Food Control 46 (2014), 225–232.
4. [4] Agrawal, S., Morarka, A., Bodas, D., Paknikar, K.M., Appl. Biochem. Biotechnol. 167 (2012), 1668–1677.
5. [5] Singh, R., Mukherjeed, M.D., Sumana, G., Gupta, R.K., Soode, S., Malhotra, B.D., Sens. Actuators B-Chem. 197 (2014), 385–404.
6. [6] Kim, S.N., Rusling, J.F., Papadimitrakopoulos, F., Adv. Mater. 19 (2007), 3214–3228.
7. [7] Agui, L., Yanez-Sedeno, P., Pingarron, J.M., Anal. Chim. Acta 622 (2008), 11–47.
8. [8] Liu, Z., Tabakman, S., Welsher, K., Dai, H.J., Nano Res. 2 (2009), 85–120.
9. [9] Trojanowicz, M., TrAC Trends Anal. Chem. 25 (2006), 480–489.
10. [10] Wang, J., Lin, Y.H., TrAC Trends Anal. Chem. 27 (2008), 619–626.
11. [11] Li, F., Peng, J., Wang, J., Tang, H., Tan, L., Xie, Q., Yao, S., Biosens. Bioelectron. 54 (2014), 158–164.
12. [12] Umemura, K., Nanomaterials 5 (2015), 321–350.
13. [13] Katz, E., Willner, I., ChemPhysChem 5 (2004), 1085–1104.
14. [14] Pantarotto, D., Briand, J.-P., Prato, M., Bianco, A., Chem. Commun., 2004, 16–17.
15. [15] Zheng, M., Jagota, A., Semke, E.D., Diner, B.A., McLean, R.S., Lustig, S.R., Richardson, R.E., Tassi, N.G., Nat. Mater. 2 (2003), 338–342.
16. [16] Zheng, M., Diner, B.A., J. Am. Chem. Soc. 126 (2004), 15490–15494.
17. [17] Nakashima, N., Okuzono, S., Murakami, H., Nakai, T., Yoshikawa, K., Chem. Lett. 32 (2003), 456–457.
18. [18] Li, Z., Wu, Z., Li, K., Anal. Biochem. 387 (2009), 267–270.
19. [19] Malik, S., Vogel, S., Rosner, H., Arnold, K., Hennrich, F., Köhler, A.-K., Richert, C., Kappes, M.M., Compos. Sci. Technol. 67 (2007), 916–921.
20. [20] Thuy, N.T., Tama, P.D., Tuan, M.A., Le, A.-T., Tama, L.T., Thu, V.V., Hieu, N.V., Chien, N.D., Curr. Appl. Phys. 12 (2012), 1553–1560.
21. [21] Hughes, J.M., Cathcart, H., Coleman, J.N., J. Phys. Chem. C 114 (2010), 11741–11747.
22. [22] He, P.G., Bayachou, M., Langmuir 21 (2005), 6086–6092.
23. [23] Yan, W., Shen, X.C., Zhang, Z.L., Chen, C., Pang, D.W., Anal. Lett. 38 (2005), 2579–2595.
24. [24] Aravind, S.S.J., Ramaprabhu, S., Sens. Actuators B 155 (2011), 679–686.
25. [25] Cao, S.R., Wang, J.F., Yuan, R., Chai, Y.Q., Sens. Lett. 9 (2011), 1636–1642.
26. [26] Shi, J., Cha, T.G., Claussen, J.C., Diggs, A.R., Choi, J.H., Porterfield, D.M., Analyst 136 (2011), 4916–4924.
27. [27] Zhang, L., Huang, C.Z., Li, Y.F., Xiao, S.J., Xie, J.P., J. Phys. Chem. B 112 (2008), 7120–7122.
28. [28] Williams, R.M., Nayeem, S., Dolash, B.D., Sooter, L.J., PLoS One, 9, 2014, e94117.
29. [29] Zhang, X., Jiao, K., Liu, S., Hu, Y., Anal. Chem. 81 (2009), 6006–6012.
30. [30] Nie, H., Yang, Z., Huang, S., Wu, Z., Wang, H., Yu, R., Jiang, J., Small 8 (2012), 1407–1414.
31. [31] Baker, G.C., Smith, J.J., Cowan, D.A., J. Microbiol. Methods 55 (2003), 541–555.
32. [32] Watanabe, K., Kodama, Y., Harayama, S., J. Microbiol. Methods 44 (2001), 253–262.
33. [33] Martineau, F., Picard, F.J., Roy, P.H., Ouellette, M., Bergeron, M.G., J. Clin. Microbiol. 36 (1998), 618–623.
34. [34] Ozkan-Ariksoysal, D., Tezcanli, B., Kosova, B., Ozsoz, M., Anal. Chem. 80 (2008), 588–596.
35. [35] Yang, M., McGovern, M.E., Thompson, M., Anal. Chim. Acta 346 (1997), 259–275.
36. [36] Hertel, T., Walkup, R.E., Avouris, P., Phys. Rev. B 58 (1998), 13870–13873.
37. [37] Gu, T., Zhang, Y., Deng, F., Zhang, J., Hasebe, Y., J. Environ. Sci. 23:Supplement (2011), S66–S69.
38. [38] Li, J., Liu, Q., Liu, Y., Liu, S., Yao, S., Anal. Biochem. 346 (2005), 107–114.
39. [39] Erdem, A., Muti, M., Karadeniz, H., Congur, G., Canavar, E., Colloid Surf. B 95 (2012), 222–228.
40. [40] Ensafi, A.A., Amini, M., Rezaei, B., Colloid Surf. B 109 (2013), 45–51.
41. [41] Bravo-Anaya, L.M., Solteroa, J.F.A., Rinaudo, M., Int. J. Biol. Macromol. 88 (2016), 345–353.
42. [42] Jung, S., Cha, M., Park, J., Jeong, N., Kim, G., Park, C., Ihm, J., Lee, J., J. Am. Chem. Soc. 132 (2010), 10964–10966.
43. [43] Choi, W.S., Choi, S.H., Hong, B., Lim, D.G., Yang, K.J., Lee, J.H., Mater. Sci. Eng. C 26 (2006), 1211–1214.
44. [44] Erdem, A., Papakonstantinou, P., Murphy, H., Anal. Chem. 78 (2006), 6656–6659.
45. [45] Rosca, I.D., Watari, F., Uo, M., Akasaka, T., Carbon 43 (2005), 3124–3131.
46. [46] Kayran, Y.U., Ozkan-Ariksoysal, D., Tezcanli, B., Kosova, B., Ozsoz, M., Electroanalysis 25 (2013), 2668–2676.
47. [47] Ozkan, D., Erdem, A., Kara, P., Kerman, K., Meric, B., Hassmann, J., Ozsoz, M., Anal. Chem. 74 (2002), 5931–5936.
48. [48] Meric, B., Kerman, K., Ozkan, D., Kara, P., Ozsoz, M., Electroanalysis 14 (2002), 1245–1250.
49. [49] Topkaya, S.N., Ozkan-Ariksoysal, D., Electroanalysis 28 (2016), 1077–1084.
50. [50] Ariksoysal, D.O., Karadeniz, H., Erdem, A., Sengonul, A., Sayiner, A.A., Ozsoz, M., Anal. Chem. 77 (2005), 4908–4917.
51. [51] Zhang, Z., Shen, C., Wang, M., Han, H., Cao, X., BioTechniques 44 (2008), 537–545.
52. [52] Erdem, A., Ariksoysal, D.O., Karadeniz, H., Kara, P., Sengonul, A., Sayiner, A.A., Ozsoz, M., Electrochem. Commun. 7 (2005), 815–820.
53. [53] Kilic, T., Topkaya, S.N., Ozkan-Ariksoysal, D., Ozsoz, M., Ballar, P., Erac, Y., Gozen, O., Biosens. Bioelectron. 38 (2012), 195–201.
54. [54] Gokce, G., Erdem, A., Ceylan, C., Akgöz, M., Talanta 149 (2016), 244–249.
55. [55] Muti, M., Sharma, S., Erdem, A., Papakonstantinou, P., Electroanalysis 23 (2011), 272–279.
56. [56] Erdem, A., Papakonstantinou, P., Murphy, H., McMullan, M., Karadeniz, H., Sharma, S., Electroanalysis 22 (2010), 611–617.
57. [57] Miller, J.N., Miller, J.C., Statistics and Chemometrics for Analytical Chemistry. 5th ed., 2005, Pearson Education, Essex, UK, 121–123.
58. [58] Mocak, J., Bond, A., Mitchell, S., Scollary, G., Pure Appl. Chem. 69 (1997), 297–328.
59. [59] Marrazza, G., Chiti, G., Mascini, M., Anichini, M., Clin. Chem. 46 (2000), 31–37.
60. [60] Lucarelli, F., Marrazza, G., Turner, A.P.F., Mascini, M., Biosens. Bioelectron. 19 (2004), 515–530.
61. [61] Wang, R.H., Minunni, M., Tombelli, S., Mascini, M., Biosens. Bioelectron. 20 (2004), 598–605.
62. [62] Feriotto, G., Lucci, M., Bianchi, N., Mischiati, C., Gambari, R., Hum. Mutat. 13 (1999), 390–400.
63. [63] Li, L.L., Cai, H., Lee, T.H., Barfood, J., Hsing, I.M., Electroanalysis 16 (2004), 81–87.