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Volumn 17, Issue 1, 2016, Pages

Genome-wide imputation study identifies novel HLA locus for pulmonary fibrosis and potential role for auto-immunity in fibrotic idiopathic interstitial pneumonia

(53)  Fingerlin, Tasha E a,b   Zhang, Weiming b   Yang, Ivana V c   Ainsworth, Hannah C d   Russell, Pamela H c   Blumhagen, Rachel Z a,b   Schwarz, Marvin I c   Brown, Kevin K a   Steele, Mark P e   Loyd, James E e   Cosgrove, Gregory P a   Lynch, David A a   Groshong, Steve a   Collard, Harold R f   Wolters, Paul J f   Bradford, Williamson Z g   Kossen, Karl g   Seiwert, Scott D g   Bois, Roland M h,i   Garcia, Christine Kim j   more..


Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; AUTOIMMUNITY; CHROMATIN IMMUNOPRECIPITATION; CONTROLLED STUDY; DQB1 GENE; FIBROTIC IDIOPATHIC INTERSTITIAL PNEUMONIA; GENE; GENE FREQUENCY; GENE LINKAGE DISEQUILIBRIUM; GENE LOCUS; GENE REPLICATION; GENETIC RECOMBINATION; GENETIC RISK; GENETIC VARIABILITY; HLA SYSTEM; HUMAN; HUMAN TISSUE; INTERSTITIAL PNEUMONIA; LUNG FIBROSIS; MAJOR CLINICAL STUDY; PROBABILITY; PROTEIN FOLDING; SINGLE NUCLEOTIDE POLYMORPHISM; VALIDATION PROCESS; ADULT; AGED; CHROMOSOME 6; FEMALE; FIBROSING ALVEOLITIS; GENE EXPRESSION PROFILING; GENE EXPRESSION REGULATION; GENETIC PREDISPOSITION; GENETICS; GENOME-WIDE ASSOCIATION STUDY; MALE; MIDDLE AGED; PROCEDURES; SEQUENCE ANALYSIS;

EID: 85008343470     PISSN: None     EISSN: 14712156     Source Type: Journal    
DOI: 10.1186/s12863-016-0377-2     Document Type: Article
Times cited : (83)

References (52)
  • 4
    • 0030034711 scopus 로고    scopus 로고
    • Occupational exposure to metal or wood dust and aetiology of cryptogenic fibrosing alveolitis
    • Hubbard R, Lewis S, Richards K, Johnston I, Britton J. Occupational exposure to metal or wood dust and aetiology of cryptogenic fibrosing alveolitis. Lancet. 1996;347:284-9.
    • (1996) Lancet. , vol.347 , pp. 284-289
    • Hubbard, R.1    Lewis, S.2    Richards, K.3    Johnston, I.4    Britton, J.5
  • 11
    • 0031898728 scopus 로고    scopus 로고
    • Exposure to commonly prescribed drugs and the etiology of cryptogenic fibrosing alveolitis: a case-control study
    • Hubbard R, Venn A, Smith C, Cooper M, Johnston I, Britton J. Exposure to commonly prescribed drugs and the etiology of cryptogenic fibrosing alveolitis: a case-control study. Am J Respir Crit Care Med. 1998;157(3 Pt 1):743-7.
    • (1998) Am J Respir Crit Care Med. , vol.157 , Issue.3 PART. 1 , pp. 743-747
    • Hubbard, R.1    Venn, A.2    Smith, C.3    Cooper, M.4    Johnston, I.5    Britton, J.6
  • 12
    • 0018632210 scopus 로고
    • Pindolol and pulmonary fibrosis
    • 6190.
    • Musk AW, Pollard JA. Pindolol and pulmonary fibrosis. Br Med J. 1979; 2(6190):581-2.
    • (1979) Br Med J. , vol.2 , pp. 581-582
    • Musk, A.W.1    Pollard, J.A.2
  • 13
    • 0017397013 scopus 로고
    • Interstitial pulmonary fibrosis: a new side effect of practolol
    • 6082.
    • Erwteman TM, Braat MC, van Aken WG. Interstitial pulmonary fibrosis: a new side effect of practolol. Br Med J. 1977;2(6082):297-8.
    • (1977) Br Med J. , vol.2 , pp. 297-298
    • Erwteman, T.M.1    Braat, M.C.2    van Aken, W.G.3
  • 16
    • 0036570052 scopus 로고    scopus 로고
    • Heterozygosity for a surfactant protein C gene mutation associated with usual interstitial pneumonitis and cellular nonspecific interstitial pneumonitis in one kindred
    • Thomas AQ, Lane K, Phillips 3rd J, Prince M, Markin C, Speer M, Schwartz DA, Gaddipati R, Marney A, Johnson J, et al. Heterozygosity for a surfactant protein C gene mutation associated with usual interstitial pneumonitis and cellular nonspecific interstitial pneumonitis in one kindred. Am J Respir Crit Care Med. 2002;165(9):1322-8.
    • (2002) Am J Respir Crit Care Med. , vol.165 , Issue.9 , pp. 1322-1328
    • Thomas, A.Q.1    Lane, K.2    Phillips, J.3    Prince, M.4    Markin, C.5    Speer, M.6    Schwartz, D.A.7    Gaddipati, R.8    Marney, A.9    Johnson, J.10
  • 24
    • 79955144623 scopus 로고    scopus 로고
    • A variant in the promoter of MUC5B and idiopathic pulmonary fibrosis
    • Zhang Y, Noth I, Garcia GN, Kaminski N. A variant in the promoter of MUC5B and idiopathic pulmonary fibrosis. N Engl J Med. 2011;364(16):1576-7.
    • (2011) N Engl J Med. , vol.364 , Issue.16 , pp. 1576-1577
    • Zhang, Y.1    Noth, I.2    Garcia, G.N.3    Kaminski, N.4
  • 27
    • 84881114723 scopus 로고    scopus 로고
    • The MUC5B Variant Is Associated with Idiopathic Pulmonary Fibrosis but Not with Systemic Sclerosis Interstitial Lung Disease in the European Caucasian Population.
    • Borie R, Crestani B, Dieude P, Nunes H, Allanore Y, Kannengiesser C, Airo P, Matucci-Cerinic M, Wallaert B, Israel-Biet D, et al. The MUC5B Variant Is Associated with Idiopathic Pulmonary Fibrosis but Not with Systemic Sclerosis Interstitial Lung Disease in the European Caucasian Population. PLoS One. 2013;8(8), e70621.
    • (2013) PLoS One. , vol.8 , Issue.8
    • Borie, R.1    Crestani, B.2    Dieude, P.3    Nunes, H.4    Allanore, Y.5    Kannengiesser, C.6    Airo, P.7    Matucci-Cerinic, M.8    Wallaert, B.9    Israel-Biet, D.10
  • 28
    • 84899572335 scopus 로고    scopus 로고
    • Association between MUC5B and TERT polymorphisms and different interstitial lung disease phenotypes
    • Wei R, Li C, Zhang M, Jones-Hall YL, Myers JL, Noth I, Liu W. Association between MUC5B and TERT polymorphisms and different interstitial lung disease phenotypes. Transl Res. 2014;163(5):494-502.
    • (2014) Transl Res. , vol.163 , Issue.5 , pp. 494-502
    • Wei, R.1    Li, C.2    Zhang, M.3    Jones-Hall, Y.L.4    Myers, J.L.5    Noth, I.6    Liu, W.7
  • 34
    • 67651222400 scopus 로고    scopus 로고
    • A flexible and accurate genotype imputation method for the next generation of genome-wide association studies.
    • Howie BN, Donnelly P, Marchini J. A flexible and accurate genotype imputation method for the next generation of genome-wide association studies. PLoS Genet. 2009;5(6), e1000529.
    • (2009) PLoS Genet. , vol.5 , Issue.6
    • Howie, B.N.1    Donnelly, P.2    Marchini, J.3
  • 35
    • 84863845193 scopus 로고    scopus 로고
    • Genotype imputation with thousands of genomes
    • Howie B, Marchini J, Stephens M. Genotype imputation with thousands of genomes. G3 (Bethesda). 2011;1(6):457-70.
    • (2011) G3 (Bethesda). , vol.1 , Issue.6 , pp. 457-470
    • Howie, B.1    Marchini, J.2    Stephens, M.3
  • 36
    • 77953808087 scopus 로고    scopus 로고
    • Genotype imputation for genome-wide association studies
    • Marchini J, Howie B. Genotype imputation for genome-wide association studies. Nat Rev Genet. 2010;11(7):499-511.
    • (2010) Nat Rev Genet. , vol.11 , Issue.7 , pp. 499-511
    • Marchini, J.1    Howie, B.2
  • 37
    • 84863003734 scopus 로고    scopus 로고
    • Genome-wide efficient mixed-model analysis for association studies
    • Zhou X, Stephens M. Genome-wide efficient mixed-model analysis for association studies. Nat Genet. 2012;44(7):821-4.
    • (2012) Nat Genet. , vol.44 , Issue.7 , pp. 821-824
    • Zhou, X.1    Stephens, M.2
  • 44
    • 77951517869 scopus 로고    scopus 로고
    • Major histocompatibility complex (MHC) class II alleles, haplotypes and epitopes which confer susceptibility or protection in systemic sclerosis: analyses in Caucasian, African-American and Hispanic cases and 1000 controls
    • Arnett FC, Gourh P, Shete S, Ahn CW, Honey RE, Agarwal SK, Tan FK, McNearney T, Fischbach M, Fritzler MJ, Mayes MD, Reveille JD. Major histocompatibility complex (MHC) class II alleles, haplotypes and epitopes which confer susceptibility or protection in systemic sclerosis: analyses in Caucasian, African-American and Hispanic cases and 1000 controls. Ann Rheum Dis. 2010;69(5):822-7.
    • (2010) Ann Rheum Dis. , vol.69 , Issue.5 , pp. 822-827
    • Arnett, F.C.1    Gourh, P.2    Shete, S.3    Ahn, C.W.4    Honey, R.E.5    Agarwal, S.K.6    Tan, F.K.7    McNearney, T.8    Fischbach, M.9    Fritzler, M.J.10    Mayes, M.D.11    Reveille, J.D.12
  • 45
    • 84898636296 scopus 로고    scopus 로고
    • Frequency and implication of autoimmune serologies in idiopathic pulmonary fibrosis
    • Moua T, Maldonado F, Decker PA, Daniels CE, Ryu JH. Frequency and implication of autoimmune serologies in idiopathic pulmonary fibrosis. Mayo Clin Proc. 2014;89(3):319-26.
    • (2014) Mayo Clin Proc. , vol.89 , Issue.3 , pp. 319-326
    • Moua, T.1    Maldonado, F.2    Decker, P.A.3    Daniels, C.E.4    Ryu, J.H.5
  • 46
    • 85008987259 scopus 로고    scopus 로고
    • This joint statement of the American Thoracic Society (ATS), and the European Respiratory Society (ERS) was adopted by the ATS board of directors, June 2001 and by the ERS Executive Committee, June 2001.
    • American Thoracic Society/European Respiratory Society International Multidisciplinary Consensus Classification of the Idiopathic Interstitial Pneumonias. This joint statement of the American Thoracic Society (ATS), and the European Respiratory Society (ERS) was adopted by the ATS board of directors, June 2001 and by the ERS Executive Committee, June 2001. Am J Respir Crit Care Med 2002, 165(2):277-304.
    • (2002) Am J Respir Crit Care Med , vol.165 , Issue.2 , pp. 277-304
  • 47
    • 67650349068 scopus 로고    scopus 로고
    • Effect of interferon gamma-1b on survival in patients with idiopathic pulmonary fibrosis (INSPIRE): a multicentre, randomised, placebo-controlled trial
    • 9685.
    • King Jr TE, Albera C, Bradford WZ, Costabel U, Hormel P, Lancaster L, Noble PW, Sahn SA, Szwarcberg J, Thomeer M, et al. Effect of interferon gamma-1b on survival in patients with idiopathic pulmonary fibrosis (INSPIRE): a multicentre, randomised, placebo-controlled trial. Lancet. 2009;374(9685):222-8.
    • (2009) Lancet. , vol.374 , pp. 222-228
    • King, T.E.1    Albera, C.2    Bradford, W.Z.3    Costabel, U.4    Hormel, P.5    Lancaster, L.6    Noble, P.W.7    Sahn, S.A.8    Szwarcberg, J.9    Thomeer, M.10
  • 49
    • 84856478855 scopus 로고    scopus 로고
    • A linear complexity phasing method for thousands of genomes
    • Delaneau O, Marchini J, Zagury JF. A linear complexity phasing method for thousands of genomes. Nat Methods. 2012;9(2):179-81.
    • (2012) Nat Methods. , vol.9 , Issue.2 , pp. 179-181
    • Delaneau, O.1    Marchini, J.2    Zagury, J.F.3
  • 50
    • 84871952176 scopus 로고    scopus 로고
    • Improved whole chromosome phasing for disease and population genetic studies
    • Delaneau O, Zagury JF, Marchini J. Improved whole chromosome phasing for disease and population genetic studies. Nat Methods. 2013;10(1):5-6.
    • (2013) Nat Methods. , vol.10 , Issue.1 , pp. 5-6
    • Delaneau, O.1    Zagury, J.F.2    Marchini, J.3
  • 51
    • 84881614989 scopus 로고    scopus 로고
    • Recommended joint and meta-analysis strategies for case-control association testing of single low-count variants
    • Ma C, Blackwell T, Boehnke M, Scott LJ, Go TDI. Recommended joint and meta-analysis strategies for case-control association testing of single low-count variants. Genet Epidemiol. 2013;37(6):539-50.
    • (2013) Genet Epidemiol. , vol.37 , Issue.6 , pp. 539-550
    • Ma, C.1    Blackwell, T.2    Boehnke, M.3    Scott, L.J.4    Go, T.D.I.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.