메뉴 건너뛰기




Volumn 7, Issue 1, 2017, Pages 441-465

Ecological genomics of local adaptation in Cornus florida L. by genotyping by sequencing

Author keywords

Cornus florida; genotyping by sequencing; local adaptation; single nucleotide polymorphisms

Indexed keywords


EID: 85007412089     PISSN: None     EISSN: 20457758     Source Type: Journal    
DOI: 10.1002/ece3.2623     Document Type: Article
Times cited : (39)

References (94)
  • 1
    • 43549087401 scopus 로고    scopus 로고
    • Plant receptor-like serine threonine kinases: Roles in signaling and plant defense
    • Afzal, A. J., Wood, A. J., & Lightfoot, D. A. (2008). Plant receptor-like serine threonine kinases: Roles in signaling and plant defense. Molecular Plant-Microbe Interactions, 21, 507–517.
    • (2008) Molecular Plant-Microbe Interactions , vol.21 , pp. 507-517
    • Afzal, A.J.1    Wood, A.J.2    Lightfoot, D.A.3
  • 2
    • 0028302033 scopus 로고
    • GPD1, which encodes glycerol-3-phosphate dehydrogenase, is essential for growth under osmotic stress in Saccharomyces cerevisiae, and its expression is regulated by the high-osmolarity glycerol response pathway
    • Albertyn, J., Hohmann, S., Thevelein, J. M., & Prior, B. A. (1994). GPD1, which encodes glycerol-3-phosphate dehydrogenase, is essential for growth under osmotic stress in Saccharomyces cerevisiae, and its expression is regulated by the high-osmolarity glycerol response pathway. Molecular and Cellular Biology, 14, 4135–4144.
    • (1994) Molecular and Cellular Biology , vol.14 , pp. 4135-4144
    • Albertyn, J.1    Hohmann, S.2    Thevelein, J.M.3    Prior, B.A.4
  • 6
    • 84878449439 scopus 로고    scopus 로고
    • RADseq underestimates diversity and introduces genealogical biases due to nonrandom haplotype sampling
    • Arnold, B., Corbett-Detig, R., Hartl, D., & Bomblies, K. (2013). RADseq underestimates diversity and introduces genealogical biases due to nonrandom haplotype sampling. Molecular Ecology, 22, 3179–3190.
    • (2013) Molecular Ecology , vol.22 , pp. 3179-3190
    • Arnold, B.1    Corbett-Detig, R.2    Hartl, D.3    Bomblies, K.4
  • 7
    • 0001925220 scopus 로고
    • The selection and use of fruit by birds in an eastern forest
    • Baird, J. W. (1980). The selection and use of fruit by birds in an eastern forest. The Wilson Bulletin, 92, 63–73.
    • (1980) The Wilson Bulletin , vol.92 , pp. 63-73
    • Baird, J.W.1
  • 9
    • 84859432863 scopus 로고    scopus 로고
    • The determinants of leaf turgor loss point and prediction of drought tolerance of species and biomes: A global meta-analysis
    • Bartlett, M. K., Scoffoni, C., & Sack, L. (2012). The determinants of leaf turgor loss point and prediction of drought tolerance of species and biomes: A global meta-analysis. Ecology Letters, 15, 393–405.
    • (2012) Ecology Letters , vol.15 , pp. 393-405
    • Bartlett, M.K.1    Scoffoni, C.2    Sack, L.3
  • 12
    • 84878464979 scopus 로고    scopus 로고
    • Population genomics based on low coverage sequencing: How low should we go?
    • Buerkle, C. A., & Gompert, Z. (2013). Population genomics based on low coverage sequencing: How low should we go? Molecular Ecology, 22, 3028–3035.
    • (2013) Molecular Ecology , vol.22 , pp. 3028-3035
    • Buerkle, C.A.1    Gompert, Z.2
  • 13
    • 84941106830 scopus 로고    scopus 로고
    • Genetic structure and post-glacial expansion of Cornus florida L.(Cornaceae): Integrative evidence from phylogeography, population demographic history, and species distribution modeling
    • Call, A., Sun, Y., Yu, Y., Pearman, P. B., Thomas, D. T., Trigiano, R. N., … Xiang, Q. Y. J. (2015). Genetic structure and post-glacial expansion of Cornus florida L.(Cornaceae): Integrative evidence from phylogeography, population demographic history, and species distribution modeling. Journal of Systematics and Evolution, 54, 136–151.
    • (2015) Journal of Systematics and Evolution , vol.54 , pp. 136-151
    • Call, A.1    Sun, Y.2    Yu, Y.3    Pearman, P.B.4    Thomas, D.T.5    Trigiano, R.N.6    Xiang, Q.Y.J.7
  • 14
    • 40149104095 scopus 로고    scopus 로고
    • Plant NB-LRR immune receptors: From recognition to transcriptional reprogramming
    • Caplan, J., Padmanabhan, M., & Dinesh-Kumar, S. P. (2008). Plant NB-LRR immune receptors: From recognition to transcriptional reprogramming. Cell Host & Microbe, 3, 126–135.
    • (2008) Cell Host & Microbe , vol.3 , pp. 126-135
    • Caplan, J.1    Padmanabhan, M.2    Dinesh-Kumar, S.P.3
  • 17
    • 0001065344 scopus 로고
    • Influence of site factors on dogwood anthracnose in the Nantahala Mountain range of western North Carolina
    • Chellemi, D., Britton, K., & Swank, W. (1992). Influence of site factors on dogwood anthracnose in the Nantahala Mountain range of western North Carolina. Plant Disease, 76, 915–918.
    • (1992) Plant Disease , vol.76 , pp. 915-918
    • Chellemi, D.1    Britton, K.2    Swank, W.3
  • 18
    • 20444406724 scopus 로고    scopus 로고
    • The ade4 package-I-One-table methods
    • Chessel, D., Dufour, A. B., & Thioulouse, J. (2004). The ade4 package-I-One-table methods. R News, 4, 5–10.
    • (2004) R News , vol.4 , pp. 5-10
    • Chessel, D.1    Dufour, A.B.2    Thioulouse, J.3
  • 19
    • 84897116569 scopus 로고    scopus 로고
    • Phylogenomic analyses reveal latitudinal population structure and polymorphisms in heat stress genes in the North Atlantic snail Nucella lapillus
    • Chu, N. D., Kaluziak, S. T., Trussell, G. C., & Vollmer, S. V. (2014). Phylogenomic analyses reveal latitudinal population structure and polymorphisms in heat stress genes in the North Atlantic snail Nucella lapillus. Molecular Ecology, 23, 1863–1873.
    • (2014) Molecular Ecology , vol.23 , pp. 1863-1873
    • Chu, N.D.1    Kaluziak, S.T.2    Trussell, G.C.3    Vollmer, S.V.4
  • 20
    • 84870920498 scopus 로고    scopus 로고
    • A call for more transparent reporting of error rates: The quality of AFLP data in ecological and evolutionary research
    • Crawford, L. A., Koscinski, D., & Keyghobadi, N. (2012). A call for more transparent reporting of error rates: The quality of AFLP data in ecological and evolutionary research. Molecular Ecology, 21, 5911–5917.
    • (2012) Molecular Ecology , vol.21 , pp. 5911-5917
    • Crawford, L.A.1    Koscinski, D.2    Keyghobadi, N.3
  • 26
    • 84903726447 scopus 로고    scopus 로고
    • PyRAD: Assembly of de novo RADseq loci for phylogenetic analyses
    • Eaton, D. A. (2014). PyRAD: Assembly of de novo RADseq loci for phylogenetic analyses. Bioinformatics (Oxford, England), 30, 1844–1849.
    • (2014) Bioinformatics (Oxford, England) , vol.30 , pp. 1844-1849
    • Eaton, D.A.1
  • 27
    • 84881616406 scopus 로고    scopus 로고
    • Inferring phylogeny and introgression using RADseq data: An example from flowering plants (Pedicularis: Orobanchaceae)
    • Eaton, D. A., & Ree, R. H. (2013). Inferring phylogeny and introgression using RADseq data: An example from flowering plants (Pedicularis: Orobanchaceae). Systematic Biology, 62, 689–706.
    • (2013) Systematic Biology , vol.62 , pp. 689-706
    • Eaton, D.A.1    Ree, R.H.2
  • 28
    • 84863338293 scopus 로고    scopus 로고
    • Gradient forests: Calculating importance gradients on physical predictors
    • Ellis, N., Smith, S. J., & Pitcher, C. R. (2012). Gradient forests: Calculating importance gradients on physical predictors. Ecology, 93, 156–168.
    • (2012) Ecology , vol.93 , pp. 156-168
    • Ellis, N.1    Smith, S.J.2    Pitcher, C.R.3
  • 29
    • 21244479740 scopus 로고    scopus 로고
    • Detecting the number of clusters of individuals using the software STRUCTURE: A simulation study
    • Evanno, G., Regnaut, S., & Goudet, J. (2005). Detecting the number of clusters of individuals using the software STRUCTURE: A simulation study. Molecular Ecology, 14, 2611–2620.
    • (2005) Molecular Ecology , vol.14 , pp. 2611-2620
    • Evanno, G.1    Regnaut, S.2    Goudet, J.3
  • 30
    • 70349506039 scopus 로고    scopus 로고
    • Detecting loci under selection in a hierarchically structured population
    • Excoffier, L., Hofer, T., & Foll, M. (2009). Detecting loci under selection in a hierarchically structured population. Heredity, 103, 285–298.
    • (2009) Heredity , vol.103 , pp. 285-298
    • Excoffier, L.1    Hofer, T.2    Foll, M.3
  • 31
    • 77953032930 scopus 로고    scopus 로고
    • Arlequin suite ver 3.5: A new series of programs to perform population genetics analyses under Linux and Windows
    • Excoffier, L., & Lischer, H. E. (2010). Arlequin suite ver 3.5: A new series of programs to perform population genetics analyses under Linux and Windows. Molecular Ecology Resources, 10, 564–567.
    • (2010) Molecular Ecology Resources , vol.10 , pp. 564-567
    • Excoffier, L.1    Lischer, H.E.2
  • 32
    • 84901234382 scopus 로고    scopus 로고
    • Climate, trees, pests, and weeds: Change, uncertainty, and biotic stressors in eastern US national park forests
    • Fisichelli, N. A., Abella, S. R., Peters, M., & Krist, F. J. (2014). Climate, trees, pests, and weeds: Change, uncertainty, and biotic stressors in eastern US national park forests. Forest Ecology and Management, 327, 31–39.
    • (2014) Forest Ecology and Management , vol.327 , pp. 31-39
    • Fisichelli, N.A.1    Abella, S.R.2    Peters, M.3    Krist, F.J.4
  • 33
    • 84916893470 scopus 로고    scopus 로고
    • Ecological genomics meets community-level modelling of biodiversity: Mapping the genomic landscape of current and future environmental adaptation
    • Fitzpatrick, M. C., & Keller, S. R. (2015). Ecological genomics meets community-level modelling of biodiversity: Mapping the genomic landscape of current and future environmental adaptation. Ecology Letters, 18, 1–16.
    • (2015) Ecology Letters , vol.18 , pp. 1-16
    • Fitzpatrick, M.C.1    Keller, S.R.2
  • 34
    • 58149347836 scopus 로고    scopus 로고
    • A genome-scan method to identify selected loci appropriate for both dominant and codominant markers: A Bayesian perspective
    • Foll, M., & Gaggiotti, O. (2008). A genome-scan method to identify selected loci appropriate for both dominant and codominant markers: A Bayesian perspective. Genetics, 180, 977–993.
    • (2008) Genetics , vol.180 , pp. 977-993
    • Foll, M.1    Gaggiotti, O.2
  • 35
    • 79951946915 scopus 로고    scopus 로고
    • Extent and scale of local adaptation in salmonid fishes: Review and meta-analysis
    • Fraser, D. J., Weir, L. K., Bernatchez, L., Hansen, M. M., & Taylor, E. B. (2011). Extent and scale of local adaptation in salmonid fishes: Review and meta-analysis. Heredity, 106, 404–420.
    • (2011) Heredity , vol.106 , pp. 404-420
    • Fraser, D.J.1    Weir, L.K.2    Bernatchez, L.3    Hansen, M.M.4    Taylor, E.B.5
  • 36
    • 84879335655 scopus 로고    scopus 로고
    • Testing for associations between loci and environmental gradients using latent factor mixed models
    • Frichot, E., Schoville, S. D., Bouchard, G., & François, O. (2013). Testing for associations between loci and environmental gradients using latent factor mixed models. Molecular Biology and Evolution, 30, 1687–1699.
    • (2013) Molecular Biology and Evolution , vol.30 , pp. 1687-1699
    • Frichot, E.1    Schoville, S.D.2    Bouchard, G.3    François, O.4
  • 37
    • 84884205417 scopus 로고    scopus 로고
    • The genetic architecture of reproductive isolation during speciation-with-gene-flow in lake whitefish species pairs assessed by rad sequencing
    • Gagnaire, P., Pavey, S. A., Normandeau, E., & Bernatchez, L. (2013). The genetic architecture of reproductive isolation during speciation-with-gene-flow in lake whitefish species pairs assessed by rad sequencing. Evolution, 67, 2483–2497.
    • (2013) Evolution , vol.67 , pp. 2483-2497
    • Gagnaire, P.1    Pavey, S.A.2    Normandeau, E.3    Bernatchez, L.4
  • 38
    • 84878430432 scopus 로고    scopus 로고
    • The effect of RAD allele dropout on the estimation of genetic variation within and between populations
    • Gautier, M., Gharbi, K., Cezard, T., Foucaud, J., Kerdelhué, C., Pudlo, P., … Estoup, A. (2013). The effect of RAD allele dropout on the estimation of genetic variation within and between populations. Molecular Ecology, 22, 3165–3178.
    • (2013) Molecular Ecology , vol.22 , pp. 3165-3178
    • Gautier, M.1    Gharbi, K.2    Cezard, T.3    Foucaud, J.4    Kerdelhué, C.5    Pudlo, P.6    Estoup, A.7
  • 39
    • 0031958718 scopus 로고    scopus 로고
    • Water relations of several hardwood species in response to throughfall manipulation in an upland oak forest during a wet year
    • Gebre, G. M., Tschaplinski, T. J., & Shirshac, T. L. (1998). Water relations of several hardwood species in response to throughfall manipulation in an upland oak forest during a wet year. Tree Physiology, 18, 299–305.
    • (1998) Tree Physiology , vol.18 , pp. 299-305
    • Gebre, G.M.1    Tschaplinski, T.J.2    Shirshac, T.L.3
  • 41
    • 37649025929 scopus 로고    scopus 로고
    • The ecodist package for dissimilarity-based analysis of ecological data
    • Goslee, S. C., & Urban, D. L. (2007). The ecodist package for dissimilarity-based analysis of ecological data. Journal of Statistical Software, 22, 1–19.
    • (2007) Journal of Statistical Software , vol.22 , pp. 1-19
    • Goslee, S.C.1    Urban, D.L.2
  • 42
    • 77957377820 scopus 로고    scopus 로고
    • Analysis of genetic diversity in flowering dogwood natural stands using microsatellites: The effects of dogwood anthracnose
    • Hadziabdic, D., Fitzpatrick, B., Wang, X., Wadl, P. A., Rinehart, T. A., Ownley, B. H., … Trigiano, R. N. (2010). Analysis of genetic diversity in flowering dogwood natural stands using microsatellites: The effects of dogwood anthracnose. Genetica, 138, 1047–1057.
    • (2010) Genetica , vol.138 , pp. 1047-1057
    • Hadziabdic, D.1    Fitzpatrick, B.2    Wang, X.3    Wadl, P.A.4    Rinehart, T.A.5    Ownley, B.H.6    Trigiano, R.N.7
  • 44
    • 67650264382 scopus 로고    scopus 로고
    • A quantitative survey of local adaptation and fitness trade-offs
    • Hereford, J. (2009). A quantitative survey of local adaptation and fitness trade-offs. The American Naturalist, 173, 579–588.
    • (2009) The American Naturalist , vol.173 , pp. 579-588
    • Hereford, J.1
  • 45
    • 77649219524 scopus 로고    scopus 로고
    • Population genomics of parallel adaptation in threespine stickleback using sequenced RAD tags
    • Hohenlohe, P. A., Bassham, S., Etter, P. D., Stiffler, N., Johnson, E. A., & Cresko, W. A. (2010). Population genomics of parallel adaptation in threespine stickleback using sequenced RAD tags. PLoS Genetics, 6, e1000862.
    • (2010) PLoS Genetics , vol.6
    • Hohenlohe, P.A.1    Bassham, S.2    Etter, P.D.3    Stiffler, N.4    Johnson, E.A.5    Cresko, W.A.6
  • 46
    • 33846407605 scopus 로고    scopus 로고
    • Influence of calcium, potassium, and magnesium on Cornus florida L. density and resistance to dogwood anthracnose
    • Holzmueller, E. J., Jose, S., & Jenkins, M. A. (2007). Influence of calcium, potassium, and magnesium on Cornus florida L. density and resistance to dogwood anthracnose. Plant and Soil, 290, 189–199.
    • (2007) Plant and Soil , vol.290 , pp. 189-199
    • Holzmueller, E.J.1    Jose, S.2    Jenkins, M.A.3
  • 47
    • 33344474821 scopus 로고    scopus 로고
    • Dogwood anthracnose in eastern hardwood forests: What is known and what can be done?
    • Holzmueller, E., Jose, S., Jenkins, M., Camp, A., & Long, A. (2006). Dogwood anthracnose in eastern hardwood forests: What is known and what can be done? Journal of Forestry, 104, 21–26.
    • (2006) Journal of Forestry , vol.104 , pp. 21-26
    • Holzmueller, E.1    Jose, S.2    Jenkins, M.3    Camp, A.4    Long, A.5
  • 48
    • 84928358919 scopus 로고    scopus 로고
    • Unforeseen consequences of excluding missing data from next-generation sequences: Simulation study of RAD sequences
    • Huang, H., & Knowles, L. L. (2014). Unforeseen consequences of excluding missing data from next-generation sequences: Simulation study of RAD sequences. Systematic Biology, 65, syu046.
    • (2014) Systematic Biology , vol.65 , pp. syu046
    • Huang, H.1    Knowles, L.L.2
  • 49
    • 44349095887 scopus 로고    scopus 로고
    • adegenet: A R package for the multivariate analysis of genetic markers
    • Jombart, T. (2008). adegenet: A R package for the multivariate analysis of genetic markers. Bioinformatics, 24, 1403–1405.
    • (2008) Bioinformatics , vol.24 , pp. 1403-1405
    • Jombart, T.1
  • 50
    • 0022172842 scopus 로고
    • Foliar nutrient dynamics and nutrient use efficiency in Cornus florida
    • Kost, J. A., & Boerner, R. (1985). Foliar nutrient dynamics and nutrient use efficiency in Cornus florida. Oecologia, 66, 602–606.
    • (1985) Oecologia , vol.66 , pp. 602-606
    • Kost, J.A.1    Boerner, R.2
  • 51
    • 84871662860 scopus 로고    scopus 로고
    • Distributed by the author, CNRS UPR9034, France
    • Langella, O. (1999). Populations version 1.2. 30. Distributed by the author, CNRS UPR9034, France.
    • (1999) Populations version 1.2. 30
    • Langella, O.1
  • 52
    • 84859210032 scopus 로고    scopus 로고
    • Fast gapped-read alignment with Bowtie 2
    • Langmead, B., & Salzberg, S. L. (2012). Fast gapped-read alignment with Bowtie 2. Nature Methods, 9, 357–359.
    • (2012) Nature Methods , vol.9 , pp. 357-359
    • Langmead, B.1    Salzberg, S.L.2
  • 53
    • 0024937968 scopus 로고
    • Spatial pattern and ecological analysis
    • Legendre, P., & Fortin, M. J. (1989). Spatial pattern and ecological analysis. Vegetatio, 80, 107–138.
    • (1989) Vegetatio , vol.80 , pp. 107-138
    • Legendre, P.1    Fortin, M.J.2
  • 54
    • 58049220322 scopus 로고    scopus 로고
    • A meta-analysis of local adaptation in plants
    • Leimu, R., & Fischer, M. (2008). A meta-analysis of local adaptation in plants. PLoS ONE, 3, e4010.
    • (2008) PLoS ONE , vol.3
    • Leimu, R.1    Fischer, M.2
  • 57
    • 84899624756 scopus 로고    scopus 로고
    • Evaluation of demographic history and neutral parameterization on the performance of FST outlier tests
    • Lotterhos, K. E., & Whitlock, M. C. (2014). Evaluation of demographic history and neutral parameterization on the performance of FST outlier tests. Molecular Ecology, 23, 2178–2192.
    • (2014) Molecular Ecology , vol.23 , pp. 2178-2192
    • Lotterhos, K.E.1    Whitlock, M.C.2
  • 58
    • 84923541687 scopus 로고    scopus 로고
    • The relative power of genome scans to detect local adaptation depends on sampling design and statistical method
    • Lotterhos, K. E., & Whitlock, M. C. (2015). The relative power of genome scans to detect local adaptation depends on sampling design and statistical method. Molecular Ecology, 24, 1031–1046.
    • (2015) Molecular Ecology , vol.24 , pp. 1031-1046
    • Lotterhos, K.E.1    Whitlock, M.C.2
  • 59
    • 84873505245 scopus 로고    scopus 로고
    • Switchgrass genomic diversity, ploidy, and evolution: Novel insights from a network-based SNP discovery protocol
    • Lu, F., Lipka, A. E., Glaubitz, J., Elshire, R., Cherney, J. H., Casler, M. D., … Costich, D. E. (2013). Switchgrass genomic diversity, ploidy, and evolution: Novel insights from a network-based SNP discovery protocol. PLoS Genetics, 9, e1003215.
    • (2013) PLoS Genetics , vol.9
    • Lu, F.1    Lipka, A.E.2    Glaubitz, J.3    Elshire, R.4    Cherney, J.H.5    Casler, M.D.6    Costich, D.E.7
  • 61
    • 84932109367 scopus 로고    scopus 로고
    • Restriction site-associated DNA sequencing, genotyping error estimation and de novo assembly optimization for population genetic inference
    • Mastretta-Yanes, A., Arrigo, N., Alvarez, N., Jorgensen, T. H., Piñero, D., & Emerson, B. (2015). Restriction site-associated DNA sequencing, genotyping error estimation and de novo assembly optimization for population genetic inference. Molecular Ecology Resources, 15, 28–41.
    • (2015) Molecular Ecology Resources , vol.15 , pp. 28-41
    • Mastretta-Yanes, A.1    Arrigo, N.2    Alvarez, N.3    Jorgensen, T.H.4    Piñero, D.5    Emerson, B.6
  • 62
    • 84933279231 scopus 로고    scopus 로고
    • Seven common mistakes in population genetics and how to avoid them
    • Meirmans, P. G. (2015). Seven common mistakes in population genetics and how to avoid them. Molecular Ecology, 13, 3223–3231.
    • (2015) Molecular Ecology , vol.13 , pp. 3223-3231
    • Meirmans, P.G.1
  • 63
    • 0009463709 scopus 로고
    • Dogwood anthracnose fungus threatens Catoctin Mountain Park
    • Mielke, M., & Langdon, K. (1986). Dogwood anthracnose fungus threatens Catoctin Mountain Park. Park Science, 6, 6–8.
    • (1986) Park Science , vol.6 , pp. 6-8
    • Mielke, M.1    Langdon, K.2
  • 64
    • 84874409839 scopus 로고    scopus 로고
    • Detecting selection along environmental gradients: Analysis of eight methods and their effectiveness for outbreeding and selfing populations
    • Mita, S., Thuillet, A., Gay, L., Ahmadi, N., Manel, S., Ronfort, J., & Vigouroux, Y. (2013). Detecting selection along environmental gradients: Analysis of eight methods and their effectiveness for outbreeding and selfing populations. Molecular Ecology, 22, 1383–1399.
    • (2013) Molecular Ecology , vol.22 , pp. 1383-1399
    • Mita, S.1    Thuillet, A.2    Gay, L.3    Ahmadi, N.4    Manel, S.5    Ronfort, J.6    Vigouroux, Y.7
  • 65
    • 7244243995 scopus 로고    scopus 로고
    • PCR-based identification of Erysiphe pulchra and Phyllactinia guttata from Cornus florida using ITS-specific primers
    • Mmbaga, M., Klopfenstein, N., Kim, M., & Mmbaga, N. (2004). PCR-based identification of Erysiphe pulchra and Phyllactinia guttata from Cornus florida using ITS-specific primers. Forest Pathology, 34, 321–328.
    • (2004) Forest Pathology , vol.34 , pp. 321-328
    • Mmbaga, M.1    Klopfenstein, N.2    Kim, M.3    Mmbaga, N.4
  • 67
    • 79951750950 scopus 로고    scopus 로고
    • Comparison of FST outlier tests for SNP loci under selection
    • Narum, S. R., & Hess, J. E. (2011). Comparison of FST outlier tests for SNP loci under selection. Molecular Ecology Resources, 11, 184–194.
    • (2011) Molecular Ecology Resources , vol.11 , pp. 184-194
    • Narum, S.R.1    Hess, J.E.2
  • 68
    • 0000655270 scopus 로고
    • Genetic distance between populations
    • Nei, M. (1972). Genetic distance between populations. American Naturalist, 106, 283–292.
    • (1972) American Naturalist , vol.106 , pp. 283-292
    • Nei, M.1
  • 70
    • 58749092473 scopus 로고    scopus 로고
    • Divergent selection and heterogeneous genomic divergence
    • Nosil, P., Funk, D. J., & Ortiz-Barrientos, D. (2009). Divergent selection and heterogeneous genomic divergence. Molecular ecology, 18, 375–402.
    • (2009) Molecular ecology , vol.18 , pp. 375-402
    • Nosil, P.1    Funk, D.J.2    Ortiz-Barrientos, D.3
  • 73
    • 84861691274 scopus 로고    scopus 로고
    • Double digest RADseq: An inexpensive method for de novo SNP discovery and genotyping in model and non-model species
    • Peterson, B. K., Weber, J. N., Kay, E. H., Fisher, H. S., & Hoekstra, H. E. (2012). Double digest RADseq: An inexpensive method for de novo SNP discovery and genotyping in model and non-model species. PLoS ONE, 7, e37135.
    • (2012) PLoS ONE , vol.7
    • Peterson, B.K.1    Weber, J.N.2    Kay, E.H.3    Fisher, H.S.4    Hoekstra, H.E.5
  • 74
    • 0034118493 scopus 로고    scopus 로고
    • Inference of population structure using multilocus genotype data
    • Pritchard, J. K., Stephens, M., & Donnelly, P. (2000). Inference of population structure using multilocus genotype data. Genetics, 155, 945–959.
    • (2000) Genetics , vol.155 , pp. 945-959
    • Pritchard, J.K.1    Stephens, M.2    Donnelly, P.3
  • 76
    • 84941941628 scopus 로고    scopus 로고
    • Phylogenomics of polyploid Fothergilla (Hamamelidaceae) by RAD-tag based GBS—insights into species origin and effects of software pipelines
    • Qi, Z., Yu, Y., Liu, X., Pais, A., Ranney, T., Whetten, R., & Xiang, Q. Y. J. (2015). Phylogenomics of polyploid Fothergilla (Hamamelidaceae) by RAD-tag based GBS—insights into species origin and effects of software pipelines. Journal of Systematics and Evolution, 53, 432–447.
    • (2015) Journal of Systematics and Evolution , vol.53 , pp. 432-447
    • Qi, Z.1    Yu, Y.2    Liu, X.3    Pais, A.4    Ranney, T.5    Whetten, R.6    Xiang, Q.Y.J.7
  • 77
    • 84883192055 scopus 로고    scopus 로고
    • A hybrid genetic linkage map of two ecologically and morphologically divergent Midas cichlid fishes (Amphilophus spp.) obtained by massively parallel DNA sequencing (ddRADSeq)
    • Recknagel, H., Elmer, K. R., & Meyer, A. (2013). A hybrid genetic linkage map of two ecologically and morphologically divergent Midas cichlid fishes (Amphilophus spp.) obtained by massively parallel DNA sequencing (ddRADSeq). G3 (Bethesda, MD), 3, 65–74.
    • (2013) G3 (Bethesda, MD) , vol.3 , pp. 65-74
    • Recknagel, H.1    Elmer, K.R.2    Meyer, A.3
  • 78
    • 0000192050 scopus 로고
    • Discula destructiva sp. nov., cause of dogwood anthracnose
    • Redlin, S. C. (1991). Discula destructiva sp. nov., cause of dogwood anthracnose. Mycologia, 83, 633–642.
    • (1991) Mycologia , vol.83 , pp. 633-642
    • Redlin, S.C.1
  • 79
    • 84859516080 scopus 로고    scopus 로고
    • Inferring phylogenies from RAD sequence data
    • Rubin, B. E., Ree, R. H., & Moreau, C. S. (2012). Inferring phylogenies from RAD sequence data. PLoS ONE, 7, e33394.
    • (2012) PLoS ONE , vol.7
    • Rubin, B.E.1    Ree, R.H.2    Moreau, C.S.3
  • 82
    • 0033199922 scopus 로고    scopus 로고
    • Roles of sugar alcohols in osmotic stress adaptation. Replacement of glycerol by mannitol and sorbitol in yeast
    • Shen, B., Hohmann, S., Jensen, R. G., & Bohnert, A. (1999). Roles of sugar alcohols in osmotic stress adaptation. Replacement of glycerol by mannitol and sorbitol in yeast. Plant Physiology, 121, 45–52.
    • (1999) Plant Physiology , vol.121 , pp. 45-52
    • Shen, B.1    Hohmann, S.2    Jensen, R.G.3    Bohnert, A.4
  • 83
    • 84887968915 scopus 로고    scopus 로고
    • Lectin receptor kinases in plant innate immunity
    • Singh, P., & Zimmerli, L. (2013). Lectin receptor kinases in plant innate immunity. Frontiers in Plant Science, 4, 124.
    • (2013) Frontiers in Plant Science , vol.4 , pp. 124
    • Singh, P.1    Zimmerli, L.2
  • 85
    • 84880141022 scopus 로고    scopus 로고
    • Putting the landscape into the genomics of trees: Approaches for understanding local adaptation and population responses to changing climate
    • Sork, V., Aitken, S., Dyer, R., Eckert, A., Legendre, P., & Neale, D. (2013). Putting the landscape into the genomics of trees: Approaches for understanding local adaptation and population responses to changing climate. Tree Genetics & Genomes, 9, 901–911.
    • (2013) Tree Genetics & Genomes , vol.9 , pp. 901-911
    • Sork, V.1    Aitken, S.2    Dyer, R.3    Eckert, A.4    Legendre, P.5    Neale, D.6
  • 87
    • 0028798188 scopus 로고
    • DNA amplification fingerprinting provides evidence that Discula destructiva, the cause of dogwood anthracnose in North America, is an introduced pathogen
    • Trigiano, R. N., Caetano-Anollés, G., Bassam, B. J., & Windham, M. T. (1995). DNA amplification fingerprinting provides evidence that Discula destructiva, the cause of dogwood anthracnose in North America, is an introduced pathogen. Mycologia, 87, 490–500.
    • (1995) Mycologia , vol.87 , pp. 490-500
    • Trigiano, R.N.1    Caetano-Anollés, G.2    Bassam, B.J.3    Windham, M.T.4
  • 88
    • 84898547407 scopus 로고    scopus 로고
    • Genome scan methods against more complex models: When and how much should we trust them?
    • Villemereuil, P., Frichot, É., Bazin, É., François, O., & Gaggiotti, O. E. (2014). Genome scan methods against more complex models: When and how much should we trust them? Molecular Ecology, 23, 2006–2019.
    • (2014) Molecular Ecology , vol.23 , pp. 2006-2019
    • Villemereuil, P.1    Frichot, É.2    Bazin, É.3    François, O.4    Gaggiotti, O.E.5
  • 89
    • 84891367659 scopus 로고    scopus 로고
    • Consequences of climate change for biotic disturbances in North American forests
    • Weed, A. S., Ayres, M. P., & Hicke, J. A. (2013). Consequences of climate change for biotic disturbances in North American forests. Ecological Monographs, 83, 441–470.
    • (2013) Ecological Monographs , vol.83 , pp. 441-470
    • Weed, A.S.1    Ayres, M.P.2    Hicke, J.A.3
  • 90
    • 0003944763 scopus 로고
    • Introduction., Chapel Hill, University of North Carolina Press, p
    • Wells, B. (1932). The natural gardens of North Carolina. Introduction. Chapel Hill: University of North Carolina Press. p. xiii.
    • (1932) The natural gardens of North Carolina. , pp. xiii
    • Wells, B.1
  • 92
    • 0036895074 scopus 로고    scopus 로고
    • Population structure of dogwood anthracnose fungus
    • Zhang, N., & Blackwell, M. (2002). Population structure of dogwood anthracnose fungus. Phytopathology, 92, 1276–1283.
    • (2002) Phytopathology , vol.92 , pp. 1276-1283
    • Zhang, N.1    Blackwell, M.2
  • 93
    • 84893599478 scopus 로고    scopus 로고
    • De novo sequencing, characterization, and comparison of inflorescence transcriptomes of Cornus canadensis and C. florida (Cornaceae)
    • Zhang, J., Franks, R. G., Liu, X., Kang, M., Keebler, J. E., Schaff, J. E., … Xiang, Q. Y. J. (2013). De novo sequencing, characterization, and comparison of inflorescence transcriptomes of Cornus canadensis and C. florida (Cornaceae). PLoS ONE, 8, e82674.
    • (2013) PLoS ONE , vol.8
    • Zhang, J.1    Franks, R.G.2    Liu, X.3    Kang, M.4    Keebler, J.E.5    Schaff, J.E.6    Xiang, Q.Y.J.7
  • 94
    • 84887272105 scopus 로고    scopus 로고
    • Are habitat fragmentation, local adaptation and isolation-by-distance driving population divergence in wild rice Oryza rufipogon?
    • Zhao, Y., Vrieling, K., Liao, H., Xiao, M., Zhu, Y., Rong, J., … Song Z. (2013). Are habitat fragmentation, local adaptation and isolation-by-distance driving population divergence in wild rice Oryza rufipogon? Molecular Ecology, 22, 5531–5547.
    • (2013) Molecular Ecology , vol.22 , pp. 5531-5547
    • Zhao, Y.1    Vrieling, K.2    Liao, H.3    Xiao, M.4    Zhu, Y.5    Rong, J.6    Song, Z.7


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.