Live probiotic cultures and the gastrointestinal tract: Symbiotic preservation of tolerance whilst attenuating pathogenicity

Frontiers in Cellular and Infection Microbiology

Volumn 4, Issue , 2014, Pages 1-5

  Vitetta, Luis ^a,b   Hall, Sean ^b   Linnane, Anthony W ^a,b  

^a UNIVERSITY OF SYDNEY   (Australia)

^b Medlab   (Australia)

Author keywords

Endosymbiotic; Pharmacobiotics; Prebiotics; Probiotics; Synbiotics

Indexed keywords

ADENOSINE DIPHOSPHATE; ADENOSINE TRIPHOSPHATE; CHLORAMPHENICOL; IMMUNOGLOBULIN ENHANCER BINDING PROTEIN; INDOMETACIN; MITOGEN ACTIVATED PROTEIN KINASE; PROBIOTIC AGENT; REACTIVE OXYGEN METABOLITE; REDUCED NICOTINAMIDE ADENINE DINUCLEOTIDE PHOSPHATE OXIDASE 1; TRANSCRIPTION FACTOR NRF2;

ALPHAPROTEOBACTERIA; ANTIBIOTIC RESISTANCE; ARTICLE; CELL METABOLISM; CLINICAL TRIAL (TOPIC); CLOSTRIDIUM DIFFICILE INFECTION; DISEASE COURSE; DYSBIOSIS; ENERGY YIELD; HOMEOSTASIS; HUMAN; IMMUNOLOGICAL TOLERANCE; INTESTINE FLORA; META ANALYSIS (TOPIC); METABOLIC REGULATION; MICROBIAL ACTIVITY; OXIDATIVE PHOSPHORYLATION; PATHOGENICITY; RANDOMIZED CONTROLLED TRIAL (TOPIC); RISK REDUCTION; SIGNAL TRANSDUCTION; SYMBIOSIS; SYSTEMATIC REVIEW (TOPIC);

EID: 85006173761     PISSN: None     EISSN: 22352988     Source Type: Journal    
DOI: 10.3389/fcimb.2014.00143     Document Type: Article

References (44)

1. Aagaard, K.,Ma, J., Antony, K.M., Ganu, R., Petrosino, J., and Versalovic, J. (2014). The placenta harbors a unique microbiome. Sci. Transl. Med. 6, 237ra65. doi: 10.1126/scitranslmed.3008599
2. Abhishek, A., Bavishi, A., Bavishi, A., and Choudhary,M. (2011). Bacterial genome chimaerism and the origin of mitochondria. Can. J. Microbiol. 57, 49-61. doi: 10.1139/W10-099
3. Alberts, B., Johnson, A., Lewis, J., Raff, M., Roberts, K., and Walter P. (2002). Molecular Biology of the Cell, 4th Edn. New York, NY: Garland Science. The Mitochondrion. Available online at: http://www.ncbi.nlm.nih.gov/books/ NBK26894/
4. Andersson, S. G., Zomorodipour, A., Andersson, J. O., Sicheritz-Pontén, T., Alsmark, U. C., Podowski, R. M., et al. (1998). The genome sequence of Rickettsia prowazekii and the origin of mitochondria. Nature 396, 133-140. doi: 10.1038/24094
5. Bäckhed, F., Ley, R. E., Sonnenburg, J. L., Peterson, D. A., and Gordon, J. I. (2005). Host-bacterial mutualism in the human intestine. Science 307, 1915-1920. doi: 10.1126/science.1104816
6. Baughn, A. D., and Malamy, M. H. (2002). A mitochondrial-like aconitase in the bacterium Bacteroides fragilis: implications for the evolution of the mitochondrial Krebs cycle. Proc. Natl. Acad. Sci. U.S.A. 99, 4662-4667. doi: 10.1073/pnas.052710199
7. Bengmark, S. (2013). Gut microbiota, immune development and function. Pharmacol. Res. 69, 87-113. doi: 10.1016/j.phrs.2012.09.002
8. Bermudez-Brito, M., Plaza-Diaz, J., Munoz-Quezada, S., Gomez-Llorente, C., and Gil, A. (2012). Probiotic mechanisms of action. Ann. Nutr. Metab. 61, 160-174. doi: 10.1159/000342079
9. Booijink, C. C., El-Aidy, S., Rajilić-Stojanović,M., Heilig, H. G., Troost, F. J., Smidt, H., et al. (2010). High temporal and inter-individual variation detected in the human ilealmicrobiota. Environ.Microbiol. 12, 3213-3227. doi: 10.1111/j.1462-2920.2010.02294.x
10. Bota, D. A., Ngo, J. K., and Davies, K. J. (2005). Down regulation of the human Lon protease impairs mitochondrial structure and function and causes cell death. Free Radic. Biol. Med. 38, 665-677. doi: 10.1016/j.freeradbiomed.2004.11.017
11. Bota, D. A., Van Remmen, H., and Davies, K. J. (2002).Modulation of Lon protease activity and aconitase turnover during aging and oxidative stress. FEBS Lett. 532, 103-106. doi: 10.1016/S0014-5793(02)03638-4
12. Burger, G., and Lang, B. F. (2003). Parallels in genome evolution in mitochondria and bacterial symbionts. IUBMB Life. 55, 205-212. doi: 10.1080/1521654031000 137380
13. Collier-Hyams, L. S., Sloane, V., Batten, B. C., and Neish, A. S. (2005). Cutting edge: bacterial modulation of epithelial signaling via changes in neddylation of cullin-1. J. Immunol. 175, 4194-4198. doi: 10.4049/jimmunol.175.7.4194
14. Coulson, S., Butt, H., Vecchio, P., Gramotnev, H., and Vitetta, L. (2013). Greenlipped mussel extract (Perna canaliculus) and glucosamine sulphate in patients with knee osteoarthritis: therapeutic efficacy and effects on gastrointestinal microbiota profiles. Infiammopharmacology 21, 79-90. doi: 10.1007/s10787-012-0146-4
15. Coulson, S., Vecchio, P., Gramotnev, H., and Vitetta, L. (2012). Green-lipped mussel (Perna canaliculus) extract efficacy in knee osteoarthritis and improvement in gastrointestinal dysfunction: a pilot study. Infiammopharmacology 20, 71-76. doi: 10.1007/s10787-012-0128-6
16. Dolan, M. F., and Margulis, L. (2007). Advances in biology reveal truth about prokaryotes. Nature 445, 21. doi: 10.1038/445021b
17. Dominguez-Bello, M. G., Costello, E. K., Contreras, M., Magris, M., Hidalgo, G., Fierer, N., et al. (2010). Delivery mode shapes the acquisition and structure of the initial microbiota across multiple body habitats in newborns. Proc. Natl. Acad. Sci. U.S.A. 107, 11971-11975. doi: 10.1073/pnas. 1002601107
18. Falk, P. G.,Hooper, L. V.,Midtvedt, T., and Gordon, J. I. (1998). Creating andmaintaining the gastrointestinal ecosystem: what we know and need to know from gnotobiology. Microbiol. Mol. Biol. Rev. 62, 1157-1170.
19. Gray, M. W., Burger, G., and Lang, B. F. (1999). Mitochondrial evolution. Science 283, 1476-1481. doi: 10.1126/science.283.5407.1476
20. Grice, E. A., and Segre, J. A. (2011). The skin microbiome. Nat. Rev. Microbiol. 9, 244-253. doi: 10.1038/nrmicro2537
21. Hickson,M. (2011). Probiotics in the prevention of antibiotic-associated diarrhoea and Clostridium difficile infection. Therap. Adv. Gastroenterol. 4, 185-197. doi: 10.1177/1756283X11399115
22. Johnston, B. C., Ma, S. S., Goldenberg, J. Z., Thorlund, K., Vandvik, P. O., Loeb, M., et al. (2012). Probiotics for the prevention of Clostridium difficile-associated diarrhea: a systematic review andmeta-analysis. Ann. Intern.Med. 157, 878-888. doi: 10.7326/0003-4819-157-12-201212180-00563
23. Kaufmann, S. H. (2008). Elie Metchnikoff 's and Paul Ehrlich's impact on infection biology. Microbes Infect. 10, 1417-1419. doi: 10.1016/j.micinf.2008.08.012
24. Koboziev, I., ReinosoWebb, C., Furr, K. L., and Grisham, M. B. (2013). Role of the enteric microbiota in intestinal homeostasis and infiammation. Free Radic. Biol. Med. 68C, 122-133. doi: 10.1016/j.freeradbiomed.2013.11.008
25. Lee, W. J. (2008). Bacterial-modulated signaling pathways in gut homeostasis. Sci. Signal. 1:pe24. doi: 10.1126/stke.121pe24
26. Leite, A. Z., Sipahi, A.M., Damião, A. O., Garcez, A. T., Buchpiguel, C. A., Lopasso, F. P., et al. (2004). Effect of a selective nonsteroidal anti-inflammatory inhibitor of cyclooxygenase-2 on the small bowel of rats. Braz. J. Med. Biol. Res. 37, 333-336. doi: 10.1590/S0100-879X2004000300007
27. Lin,P.W.,Myers,L.E.,Ray,L.,Song,S.C.,Nasr,T.R.,Berardinelli,A.J.,etal. (2009). Lactobacillus rhamnosus blocks inflammatory signaling in vivo via reactive oxygen species generation. Free Radic. Biol. Med. 47, 1205-1211. doi: 10.1016/j.freeradbiomed.2009.07.033
28. Linnane, A. W., Kios, M., and Vitetta, L. (2007). Healthy aging: regulation of the metabolome by cellular redox modulation and prooxidant signaling systems: the essential roles of superoxide anion and hydrogen peroxide. Biogerontology 8, 445-467. doi: 10.1007/s10522-007-9096-4
29. Morris, K. V., and Mattick, J. S. (2014). The rise of regulatory RNA. Nat. Rev. Genet. 15, 423-437. doi: 10.1038/nrg3722
30. Neish, A. S. (2013). Redox signaling mediated by the gut microbiota. Free Radic. Res. 47, 950-957. doi: 10.3109/10715762.2013.833331
31. Neish, A. S., Gewirtz, A. T., Zeng, H., Young, A. N., Hobert,M. E., Karmali, V., et al. (2000). Prokaryotic regulation of epithelial responses by inhibition of Ikappa B-alpha ubiquitination. Science 289, 1560-1563. doi: 10.1126/science.289.5484. 1560
32. Pepper, J., and Rosenfeld, S. (2012). The emerging medical ecology of the human gut microbiome. Trends Ecol. Evol. 27, 381-384. doi: 10.1016/j.tree.2012.03.002
33. Qin, J., Li, Y., Cai, Z., Li, S., Zhu, J., Zhang, F., et al. (2012). A metagenome-wide association study of gut microbiota in type 2 diabetes. Nature 490, 55-60. doi: 10.1038/nature11450
34. Scarpignato, C., and Hunt, R. H. (2010). Nonsteroidal antiinflammatory drugrelated injury to the gastrointestinal tract: clinical picture, pathogenesis and prevention. Gastroenterol. Clin. N. Am. 39, 433-464. doi: 10.1016/j.gtc.2010. 08.010
35. Shih, P. M, and Matzke, N. J. (2013). Primary endosymbiosis events date to the later proterozoic with cross-calibrated phylogenetic dating of duplicated ATPase proteins. Proc. Natl. Acad. Sci. U.S.A. 110, 12355-12360. doi: 10.1073/pnas.1305 813110
36. Somasundaram, S., Rafi, S., Hayllar, J., Sigthorsson, G., Jacob,M., Price, A. B., et al. (1997). Mitochondrial damage: a possible mechanism of the "topical" phase of NSAID induced injury to the rat intestine. Gut 41, 344-353. doi: 10.1136/gut. 41.3.344
37. Tremaroli, V., and Bäckhed, F. (2012). Functional interactions between the gut microbiota and host metabolism. Nature 489, 242-249. doi: 10.1038/ nature11552
38. Vitetta, L., Briskey, D., Hayes, E., Shing, C., and Peake, J. (2013). A review of the pharmacobiotic regulation of gastrointestinal inflammation by probiotics, commensal bacteria and prebiotics. Inflammopharmacol 20, 251-266. doi: 10.1007/ s10787-012-0126-8
39. Vitetta, L., and Gobe, G. (2013). Uremia and chronic kidney disease: the role of the gut microbiora and therapies with pro- and prebiotics. Mol. Nutr. Food Res. 57, 824-832. doi: 10.1002/mnfr.201200714
40. Vitetta, L., Linnane, A.W., and Gobe, G. C. (2013a). From the gastrointestinal tract (GIT) to the kidneys: live bacterial cultures (probiotics)mediating reductions of uremic toxin levels via free radical signaling. Toxins (Basel) 5, 2042-2057. doi: 10.3390/toxins5112042
41. Vitetta, L., and Sali, A. (2008). Probiotics, prebiotics and gastrointestinal health. Med. Today 9, 65-70.
42. Yan, F., Cao, H., Cover, T. L., Whitehead, R., Washington, M. K., and Polk, D. B. (2007). Soluble proteins produced by probiotic bacteria regulate intestinal epithelial cell survival and growth. Gastroenterology 132, 562-575. doi: 10.1053/ j.gastro.2006.11.022
43. Zhu, H., and Li, Y. R. (2012). Oxidative stress and redox signaling mechanisms of inflammatory bowel disease: updated experimental and clinical evidence. Exp. Biol. Med. (Maywood). 237, 474-480. doi: 10.1258/ebm.2011.011358
44. Zoetendal, E. G., Rajilic-Stojanovic, M., and de Vos, W. M. (2008). Highthroughput diversity and functionality analysis of the gastrointestinal tract microbiota. Gut 57, 1605-1615. doi: 10.1136/gut.2007.133603