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Volumn 1488, Issue , 2017, Pages 75-120

Genenetwork: A toolbox for systems genetics

Author keywords

Allen Brain Atlas; BioGPS; DbSNP; EQTL analysis; Gemma; GeneRIF; GeneWeaver; GEO; GTEx; GWAS Catalog; Interval mapping; Manhattan plot; Metabolomics; Metagenomics; NCBI; Pair scan; PLINK; Principal component analysis; Proteomics; R qtl; Recombinant inbred strain; Reverse genetics; Test cross; UCSC Genome Browser; WebGestalt; WebQTL; WGCNA

Indexed keywords

GENE EXPRESSION; GENETIC VARIATION; GENETICS; GENOTYPE; HUMAN; NONHUMAN; PHENOTYPE; QUANTITATIVE TRAIT LOCUS MAPPING; SINGLE NUCLEOTIDE POLYMORPHISM; SOFTWARE; ANIMAL; BIOLOGY; CHROMOSOMAL MAPPING; COMPUTER INTERFACE; GENE REGULATORY NETWORK; GENETIC LINKAGE; GENOMICS; MOUSE; POPULATION GENETICS; PROCEDURES; QUANTITATIVE TRAIT; QUANTITATIVE TRAIT LOCUS; WEB BROWSER;

EID: 85005974410     PISSN: 10643745     EISSN: None     Source Type: Book Series    
DOI: 10.1007/978-1-4939-6427-7_4     Document Type: Chapter
Times cited : (124)

References (32)
  • 1
    • 0032805974 scopus 로고    scopus 로고
    • Overview of QTL mapping software and introduction to map manager QT
    • Manly KF, Olson JM (1999) Overview of QTL mapping software and introduction to map manager QT. Mamm Genome 10(4):327-334
    • (1999) Mamm Genome , vol.10 , Issue.4 , pp. 327-334
    • Manly, K.F.1    Olson, J.M.2
  • 2
    • 0028450053 scopus 로고
    • The portable dictionary of the mouse genome: A personal database for gene mapping and molecular biology
    • Williams RW (1994) The portable dictionary of the mouse genome: a personal database for gene mapping and molecular biology. Mamm Genome 5(6):372-375
    • (1994) Mamm Genome , vol.5 , Issue.6 , pp. 372-375
    • Williams, R.W.1
  • 5
    • 0242353110 scopus 로고    scopus 로고
    • Genetic correlates of gene expression in recombinant inbred strains: A relational model system to explore neurobehavioral phenotypes
    • Chesler EJ, Wang J, Lu L, Qu Y, Manly KF, Williams RW (2003) Genetic correlates of gene expression in recombinant inbred strains: a relational model system to explore neurobehavioral phenotypes. Neuroinformatics 1(4):343-357. doi:10.1385/NI:1:4:343
    • (2003) Neuroinformatics , vol.1 , Issue.4 , pp. 343-357
    • Chesler, E.J.1    Wang, J.2    Lu, L.3    Qu, Y.4    Manly, K.F.5    Williams, R.W.6
  • 6
    • 0242290115 scopus 로고    scopus 로고
    • WebQTL: Web-based complex trait analysis
    • Wang J, Williams RW, Manly KF (2003) WebQTL: web-based complex trait analysis. Neuroinformatics 1(4):299-308. doi:10.1385/NI:1:4:299
    • (2003) Neuroinformatics , vol.1 , Issue.4 , pp. 299-308
    • Wang, J.1    Williams, R.W.2    Manly, K.F.3
  • 7
    • 77957862149 scopus 로고    scopus 로고
    • A transposon in comt generates mRNA variants and causes widespread expression and behavioral differences among mice
    • Li Z, Mulligan MK, Wang X, Miles MF, Lu L, Williams RW (2010) A transposon in comt generates mRNA variants and causes widespread expression and behavioral differences among mice. PLoS One 5(8):e12181. doi:10.1371/journal.pone.0012181
    • (2010) Plos One , vol.5 , Issue.8
    • Li, Z.1    Mulligan, M.K.2    Wang, X.3    Miles, M.F.4    Lu, L.5    Williams, R.W.6
  • 8
    • 84907587780 scopus 로고    scopus 로고
    • An evolutionarily conserved role for the aryl hydrocarbon receptor in the regulation of movement
    • Williams EG, Mouchiroud L, Frochaux M, Pandey A, Andreux PA, Deplancke B, Auwerx J (2014) An evolutionarily conserved role for the aryl hydrocarbon receptor in the regulation of movement. PLoS Genet 10(9):e1004673. doi:10.1371/journal.pgen.1004673
    • (2014) Plos Genet , vol.10 , Issue.9
    • Williams, E.G.1    Mouchiroud, L.2    Frochaux, M.3    Pandey, A.4    Reux, P.A.5    Deplancke, B.6    Auwerx, J.7
  • 9
    • 84957555626 scopus 로고    scopus 로고
    • Joint mouse-human phenome-wide association to test gene function and disease risk
    • Wang X, MK M, Pandey A, Williams EG, Mozhui K et al (2016) Joint mouse-human phenome-wide association to test gene function and disease risk. Nat Commun 7:10464
    • (2016) Nat Commun , vol.7 , pp. 10464
    • Wang, X.1    Mk, M.2    Pandey, A.3    Williams, E.G.4    Mozhui, K.5
  • 10
    • 2142652098 scopus 로고    scopus 로고
    • WebQTL: Rapid exploratory analysis of gene expression and genetic networks for brain and behavior
    • Chesler EJ, Lu L, Wang J, Williams RW, Manly KF (2004) WebQTL: rapid exploratory analysis of gene expression and genetic networks for brain and behavior. Nat Neurosci 7(5):485-486. doi:10.1038/nn0504-485
    • (2004) Nat Neurosci , vol.7 , Issue.5 , pp. 485-486
    • Chesler, E.J.1    Lu, L.2    Wang, J.3    Williams, R.W.4    Manly, K.F.5
  • 11
    • 25444501564 scopus 로고    scopus 로고
    • A new set of BXD recombinant inbred lines from advanced intercross populations in mice
    • Peirce JL, Lu L, Gu J, Silver LM, Williams RW (2004) A new set of BXD recombinant inbred lines from advanced intercross populations in mice. BMC Genet 5:7. doi:10.1186/1471-2156-5-7
    • (2004) BMC Genet , vol.5 , pp. 7
    • Peirce, J.L.1    Lu, L.2    Gu, J.3    Silver, L.M.4    Williams, R.W.5
  • 12
    • 0015796924 scopus 로고
    • Genetic analysis of resistance to cadmiuminduced testicular damage in mice
    • Taylor BA, Heiniger HJ, Meier H (1973) Genetic analysis of resistance to cadmiuminduced testicular damage in mice. Proc Soc Exp Biol Med 143(3):629-633
    • (1973) Proc Soc Exp Biol Med , vol.143 , Issue.3 , pp. 629-633
    • Taylor, B.A.1    Heiniger, H.J.2    Meier, H.3
  • 13
    • 77957914885 scopus 로고    scopus 로고
    • QTLminer: Identifying genes regulating quantitative traits
    • Alberts R, Schughart K (2010) QTLminer: identifying genes regulating quantitative traits. BMC Bioinformatics 11:516. doi:10.1186/1471-2105-11-5161471-2105-11-516
    • (2010) BMC Bioinformatics , vol.11 , pp. 516
    • Alberts, R.1    Schughart, K.2
  • 17
    • 74249094927 scopus 로고    scopus 로고
    • Detection, validation, and downstream analysis of allelic variation in gene expression
    • genetics.109.107474[pii]
    • Ciobanu DC, Lu L, Mozhui K, Wang X, Jagalur M, Morris JA, Taylor WL, Dietz K, Simon P, Williams RW (2010) Detection, validation, and downstream analysis of allelic variation in gene expression. Genetics 184(1):119-128. doi:10.1534/genetics.109.107474,doi:genetics.109.107474[pii]
    • (2010) Genetics , vol.184 , Issue.1 , pp. 119-128
    • Ciobanu, D.C.1    Lu, L.2    Mozhui, K.3    Wang, X.4    Jagalur, M.5    Morris, J.A.6    Taylor, W.L.7    Dietz, K.8    Simon, P.9    Williams, R.W.10
  • 18
    • 12744279636 scopus 로고    scopus 로고
    • Gene clustering by latent semantic indexing of MEDLINE abstracts
    • Homayouni R, Heinrich K, Wei L, Berry MW (2005) Gene clustering by latent semantic indexing of MEDLINE abstracts. Bioinformatics 21(1):104-115. doi:10.1093/bioinformatics/bth464
    • (2005) Bioinformatics , vol.21 , Issue.1 , pp. 104-115
    • Homayouni, R.1    Heinrich, K.2    Wei, L.3    Berry, M.W.4
  • 19
    • 84870283344 scopus 로고    scopus 로고
    • Genetic and molecular network analysis of behavior
    • Williams RW, Mulligan MK (2012) Genetic and molecular network analysis of behavior. Int Rev Neurobiol 104:135-157. doi:10.1016/B978-0-12-398323-7.00006-9
    • (2012) Int Rev Neurobiol , vol.104 , pp. 135-157
    • Williams, R.W.1    Mulligan, M.K.2
  • 24
    • 60549111634 scopus 로고    scopus 로고
    • WGCNA: An R package for weighted correlation network analysis
    • Langfelder P, Horvath S (2008) WGCNA: an R package for weighted correlation network analysis. BMC Bioinformatics 9:559. doi:10.1186/1471-2105-9-559
    • (2008) BMC Bioinformatics , vol.9 , pp. 559
    • Langfelder, P.1    Horvath, S.2
  • 25
    • 84929001104 scopus 로고    scopus 로고
    • Human genomics. The Genotype-Tissue Expression (GTEx) pilot analysis: Multitissue gene regulation in humans
    • GTEx Consortium (2015) Human genomics. The Genotype-Tissue Expression (GTEx) pilot analysis: multitissue gene regulation in humans. Science 348(6235):648-660. doi:10.1126/science.1262110
    • (2015) Science , vol.348 , Issue.6235 , pp. 648-660
  • 31
    • 33645770040 scopus 로고    scopus 로고
    • Genetic and genomic analysis of a fat mass trait with complex inheritance reveals marked sex specifi city
    • Wang S, Yehya N, Schadt EE, Wang H, Drake TA, Lusis AJ (2006) Genetic and genomic analysis of a fat mass trait with complex inheritance reveals marked sex specifi city. PLoS Genet 2(2), e15
    • (2006) Plos Genet , vol.2 , Issue.2
    • Wang, S.1    Yehya, N.2    Schadt, E.E.3    Wang, H.4    Drake, T.A.5    Lusis, A.J.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.