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Volumn 15, Issue 1, 2016, Pages

Engineering Aspergillus niger for galactaric acid production: Elimination of galactaric acid catabolism by using RNA sequencing and CRISPR/Cas9

Author keywords

Aspergillus niger; CRISPR; d galacturonic acid; Galactaric acid; Metabolic engineering; Mucic acid; Pectin; Uronate dehydrogenase

Indexed keywords

DICARBOXYLIC ACID; GALACTARIC ACID; GALACTURONIC ACID; GUIDE RNA; OXIDOREDUCTASE; PECTIN; SINGLE CHIMERIC GUIDE RNA; UNCLASSIFIED DRUG; URONATE DEHYDROGENASE; SUGAR ACID;

EID: 85003707555     PISSN: None     EISSN: 14752859     Source Type: Journal    
DOI: 10.1186/s12934-016-0613-5     Document Type: Article
Times cited : (111)

References (25)
  • 1
    • 84898657924 scopus 로고    scopus 로고
    • Highly efficient chemical process to convert mucic acid into adipic acid and DFT studies of the mechanism of the rhenium-catalyzed deoxydehydration
    • Li X, Wu D, Lu T, Yi G, Su H, Zhang Y. Highly efficient chemical process to convert mucic acid into adipic acid and DFT studies of the mechanism of the rhenium-catalyzed deoxydehydration. Angewandte Chemie. 2014;53:4200-4.
    • (2014) Angewandte Chemie , vol.53 , pp. 4200-4204
    • Li, X.1    Wu, D.2    Lu, T.3    Yi, G.4    Su, H.5    Zhang, Y.6
  • 2
    • 0035541913 scopus 로고    scopus 로고
    • Convenient synthesis of furan-2,5-dicarboxylic acid and its derivatives
    • Lewkowski J. Convenient synthesis of furan-2,5-dicarboxylic acid and its derivatives. Polish J. Chem. 2001;75:1943-6.
    • (2001) Polish J. Chem , vol.75 , pp. 1943-1946
    • Lewkowski, J.1
  • 3
    • 38949094944 scopus 로고    scopus 로고
    • One-step synthesis of dibutyl furandicarboxylates from galactaric acid
    • Taguchi Y, Oishi A, Iida H. One-step synthesis of dibutyl furandicarboxylates from galactaric acid. Chem Lett. 2008;37:50-1.
    • (2008) Chem Lett , vol.37 , pp. 50-51
    • Taguchi, Y.1    Oishi, A.2    Iida, H.3
  • 4
    • 84903095838 scopus 로고    scopus 로고
    • Furandicarboxylic acid (FDCA), a versatile building block for a very interesting class of polyesters
    • In: Smith P, Gross R, editors. ACS symposium series. Washington: American Chemical Society
    • de Jong E, Dam M, Sipos L, Gruter G-J. Furandicarboxylic acid (FDCA), a versatile building block for a very interesting class of polyesters. In: Smith P, Gross R, editors. Biobased monomers, polym mater. ACS symposium series. Washington: American Chemical Society; 2012. p. 1-13.
    • (2012) Biobased monomers, polym mater. , pp. 1-13
    • Jong, E.1    Dam, M.2    Sipos, L.3    Gruter, G.-J.4
  • 6
    • 77950629780 scopus 로고    scopus 로고
    • Identification in Agrobacterium tumefaciens of the d-galacturonic acid dehydrogenase gene
    • Boer H, Maaheimo H, Koivula A, Penttilä M, Richard P. Identification in Agrobacterium tumefaciens of the d-galacturonic acid dehydrogenase gene. Appl Microbiol Biotechnol. 2010;86:901-9.
    • (2010) Appl Microbiol Biotechnol , vol.86 , pp. 901-909
    • Boer, H.1    Maaheimo, H.2    Koivula, A.3    Penttilä, M.4    Richard, P.5
  • 7
    • 0011201480 scopus 로고
    • The metabolism of galactarate, d-glucarate and various pentoses by species of Pseudomonas
    • Dagley S, Trudgill PW. The metabolism of galactarate, d-glucarate and various pentoses by species of Pseudomonas. Biochem J. 1965;95:48-58.
    • (1965) Biochem J , vol.95 , pp. 48-58
    • Dagley, S.1    Trudgill, P.W.2
  • 8
    • 0014766559 scopus 로고
    • d-Glucaric acid and galactaric acid catabolism by Agrobacterium tumefaciens
    • Chang YF, Feingold DS. d-Glucaric acid and galactaric acid catabolism by Agrobacterium tumefaciens. J Bacteriol. 1970;102:85-96.
    • (1970) J Bacteriol , vol.102 , pp. 85-96
    • Chang, Y.F.1    Feingold, D.S.2
  • 9
    • 84897671128 scopus 로고    scopus 로고
    • Identification and characterization of a galacturonic acid transporter from Neurospora crassa and its application for Saccharomyces cerevisiae fermentation processes
    • Benz JP, Protzko RJ, Andrich JM, Bauer S, Dueber JE, Somerville CR. Identification and characterization of a galacturonic acid transporter from Neurospora crassa and its application for Saccharomyces cerevisiae fermentation processes. Biotechnol Biofuels. 2014;7:20.
    • (2014) Biotechnol Biofuels , vol.7 , pp. 20
    • Benz, J.P.1    Protzko, R.J.2    Andrich, J.M.3    Bauer, S.4    Dueber, J.E.5    Somerville, C.R.6
  • 10
    • 84977951499 scopus 로고    scopus 로고
    • Production of adipic acid from sugar beet residue by combined biological and chemical catalysis
    • Zhang H, Li X, Su X, Ang L, Zhang Y, Zhao H. Production of adipic acid from sugar beet residue by combined biological and chemical catalysis. Chem Cat Chem. 2016;8:1500-6.
    • (2016) Chem Cat Chem. , vol.8 , pp. 1500-1506
    • Zhang, H.1    Li, X.2    Su, X.3    Ang, L.4    Zhang, Y.5    Zhao, H.6
  • 11
  • 12
    • 34548818136 scopus 로고    scopus 로고
    • The missing link in the fungal d-galacturonate pathway: identification of the l-threo-3-deoxy-hexulosonate aldolase
    • Hilditch S, Berghäll S, Kalkkinen N, Penttilä M, Richard P. The missing link in the fungal d-galacturonate pathway: identification of the l-threo-3-deoxy-hexulosonate aldolase. J Biol Chem. 2007;282:26195-201.
    • (2007) J Biol Chem , vol.282 , pp. 26195-26201
    • Hilditch, S.1    Berghäll, S.2    Kalkkinen, N.3    Penttilä, M.4    Richard, P.5
  • 13
    • 23944433365 scopus 로고    scopus 로고
    • Identification in the mold Hypocrea jecorina of the first fungal d-galacturonic acid reductase
    • Kuorelahti S, Kalkkinen N, Penttilä M, Londesborough J, Richard P. Identification in the mold Hypocrea jecorina of the first fungal d-galacturonic acid reductase. Biochemistry. 2005;44:11234-40.
    • (2005) Biochemistry , vol.44 , pp. 11234-11240
    • Kuorelahti, S.1    Kalkkinen, N.2    Penttilä, M.3    Londesborough, J.4    Richard, P.5
  • 14
    • 84940524988 scopus 로고    scopus 로고
    • A CRISPR-Cas9 system for genetic engineering of filamentous fungi
    • Nodvig CS, Nielsen JB, Kogle ME, Mortensen UH. A CRISPR-Cas9 system for genetic engineering of filamentous fungi. PLoS ONE. 2015;10:e0133085.
    • (2015) PLoS ONE , vol.10
    • Nodvig, C.S.1    Nielsen, J.B.2    Kogle, M.E.3    Mortensen, U.H.4
  • 15
    • 84897119972 scopus 로고    scopus 로고
    • Conversion of orange peel to l-galactonic acid in a consolidated process using engineered strains of Aspergillus niger
    • Kuivanen J, Dantas H, Mojzita D, Mallmann E, Biz A, Krieger N, et al. Conversion of orange peel to l-galactonic acid in a consolidated process using engineered strains of Aspergillus niger. AMB Express. 2014;4:33.
    • (2014) AMB Express. , vol.4 , pp. 33
    • Kuivanen, J.1    Dantas, H.2    Mojzita, D.3    Mallmann, E.4    Biz, A.5    Krieger, N.6
  • 17
    • 55149112803 scopus 로고    scopus 로고
    • An evolutionary conserved d-galacturonic acid metabolic pathway operates across filamentous fungi capable of pectin degradation
    • Martens-Uzunova ES, Schaap PJ. An evolutionary conserved d-galacturonic acid metabolic pathway operates across filamentous fungi capable of pectin degradation. Fungal Genet Biol. 2008;45:1449-57.
    • (2008) Fungal Genet Biol , vol.45 , pp. 1449-1457
    • Martens-Uzunova, E.S.1    Schaap, P.J.2
  • 18
    • 84969930997 scopus 로고    scopus 로고
    • A novel pathway for fungal d-glucuronate catabolism contains an l-idonate forming 2-keto-l-gulonate reductase
    • Kuivanen J, Sugai-Guérios MH, Arvas M, Richard P. A novel pathway for fungal d-glucuronate catabolism contains an l-idonate forming 2-keto-l-gulonate reductase. Sci Rep. 2016;6:26329.
    • (2016) Sci Rep. , vol.6 , pp. 26329
    • Kuivanen, J.1    Sugai-Guérios, M.H.2    Arvas, M.3    Richard, P.4
  • 19
    • 84941358492 scopus 로고    scopus 로고
    • Efficient genome editing in filamentous fungus Trichoderma reesei using the CRISPR/Cas9 system
    • Liu R, Chen L, Jiang Y, Zhou Z, Zou G. Efficient genome editing in filamentous fungus Trichoderma reesei using the CRISPR/Cas9 system. Cell Discov. 2015;1:15007.
    • (2015) Cell Discov. , vol.1 , pp. 15007
    • Liu, R.1    Chen, L.2    Jiang, Y.3    Zhou, Z.4    Zou, G.5
  • 21
    • 84950264293 scopus 로고    scopus 로고
    • Highly efficient CRISPR mutagenesis by microhomology-mediated end joining in Aspergillus fumigatus
    • Zhang C, Meng X, Wei X, Lu L. Highly efficient CRISPR mutagenesis by microhomology-mediated end joining in Aspergillus fumigatus. Fungal Genet Biol. 2016;86:47-57.
    • (2016) Fungal Genet Biol , vol.86 , pp. 47-57
    • Zhang, C.1    Meng, X.2    Wei, X.3    Lu, L.4
  • 23
    • 0013789861 scopus 로고
    • Wild-type and mutant stocks of Aspergillus nidulans
    • Barratt R, Johnson G, Ogata W. Wild-type and mutant stocks of Aspergillus nidulans. Genetics. 1965;52:233-46.
    • (1965) Genetics , vol.52 , pp. 233-246
    • Barratt, R.1    Johnson, G.2    Ogata, W.3
  • 24
    • 84924067486 scopus 로고    scopus 로고
    • Metabolic engineering of the fungal d-galacturonate pathway for l-ascorbic acid production
    • Kuivanen J, Penttilä M, Richard P. Metabolic engineering of the fungal d-galacturonate pathway for l-ascorbic acid production. Microb Cell Fact. 2015;14:2.
    • (2015) Microb Cell Fact , vol.14 , pp. 2
    • Kuivanen, J.1    Penttilä, M.2    Richard, P.3
  • 25
    • 79957958102 scopus 로고    scopus 로고
    • Comparative genomics of citric-acid-producing Aspergillus niger ATCC 1015 versus enzyme-producing CBS 513.88
    • Andersen MR, Salazar MP, Schaap PJ, Van De Vondervoort PJI, Culley D, Thykaer J, et al. Comparative genomics of citric-acid-producing Aspergillus niger ATCC 1015 versus enzyme-producing CBS 513.88. Genome Res. 2011;21:885-97.
    • (2011) Genome Res , vol.21 , pp. 885-897
    • Andersen, M.R.1    Salazar, M.P.2    Schaap, P.J.3    Vondervoort, P.J.I.4    Culley, D.5    Thykaer, J.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.