TrackMate: An open and extensible platform for single-particle tracking

Methods

Volumn 115, Issue , 2017, Pages 80-90

  Tinevez, Jean Yves ^a   Perry, Nick ^a,e   Schindelin, Johannes ^b,f   Hoopes, Genevieve M ^b   Reynolds, Gregory D ^b   Laplantine, Emmanuel ^c   Bednarek, Sebastian Y ^b   Shorte, Spencer L ^a   Eliceiri, Kevin W ^b,d  

^a INSTITUT PASTEUR   (France)

^b UNIVERSITY OF WISCONSIN MADISON   (United States)

^c CNRS   (France)

^d MORGRIDGE INSTITUTE FOR RESEARCH   (United States)

^e Palantir Technologies   (United States)

^f MICROSOFT   (United States)

Author keywords

Clathin mediated endocytosis; Image analysis; Microscopy; Open source software; Phototoxicity; Single particle tracking

Indexed keywords

CLATHRIN; I KAPPA B KINASE GAMMA; INTERLEUKIN 1; VESICULAR TRANSPORT ADAPTOR PROTEIN;

ANIMAL CELL; ARTICLE; AUTOMATION; CAENORHABDITIS ELEGANS; CELL DAMAGE; CELL LINEAGE; CELL MOTILITY; CELL ORGANELLE; CELL TRACKING; COMPUTER INTERFACE; CONTROLLED STUDY; EMBRYO; EMBRYO DEVELOPMENT; ENDOCYTOSIS; FIBROBLAST; FLUORESCENCE IMAGING; IMAGING SOFTWARE; MEASUREMENT ACCURACY; MOLECULAR IMAGING; NONHUMAN; PHOTOTOXICITY; PHYSICAL SENSITIVITY; PRIORITY JOURNAL; PROCESS OPTIMIZATION; SINGLE PARTICLE TRACKING; ALGORITHM; ANIMAL; ARABIDOPSIS; GENE EXPRESSION REGULATION; GENETICS; IMAGE PROCESSING; METABOLISM; NONMAMMALIAN EMBRYO; PHOTOTRANSDUCTION; PLANT CELL; PROCEDURES; SINGLE CELL ANALYSIS; SOFTWARE; STATISTICS AND NUMERICAL DATA; ULTRASTRUCTURE;

ADAPTOR PROTEINS, VESICULAR TRANSPORT; ALGORITHMS; ANIMALS; ARABIDOPSIS; CAENORHABDITIS ELEGANS; CELL TRACKING; CLATHRIN; EMBRYO, NONMAMMALIAN; ENDOCYTOSIS; FIBROBLASTS; GENE EXPRESSION REGULATION, PLANT; IMAGE PROCESSING, COMPUTER-ASSISTED; LIGHT SIGNAL TRANSDUCTION; PLANT CELLS; SINGLE-CELL ANALYSIS; SOFTWARE;

EID: 85002002648     PISSN: 10462023     EISSN: 10959130     Source Type: Journal    
DOI: 10.1016/j.ymeth.2016.09.016     Document Type: Article

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