메뉴 건너뛰기




Volumn 5, Issue 4, 2015, Pages 368-379

A large-scale analysis of genetic variants within putative miRNA binding sites in prostate cancer

(138)  Stegeman, Shane a   Amankwah, Ernest b   Klein, Kerenaftali c   O’Mara, Tracy A c   Kim, Donghwa b   Lin, Hui Yi b   Permuth Wey, Jennifer b   Sellers, Thomas A b   Srinivasan, Srilakshmi a   Eeles, Rosalind d,e   Easton, Doug f   Kote Jarai, Zsofia d   Al Olama, Ali Amin f   Benlloch, Sara f   Muir, Kenneth g   Giles, Graham G h,i   Wiklund, Fredrik j   Gronberg, Henrik j   Haiman, Christopher A k   Schleutker, Johanna l,m   more..


Author keywords

[No Author keywords available]

Indexed keywords

KALLIKREIN 3; MICRORNA; MICRORNA 3162; MICRORNA 370; PROSTATE SPECIFIC ANTIGEN; SYNAPTOBREVIN; UNCLASSIFIED DRUG; 3' UNTRANSLATED REGION; KALLIKREIN; KALLIKREIN-RELATED PEPTIDASE 3, HUMAN; MESSENGER RNA; VAMP8 PROTEIN, HUMAN;

EID: 85000352081     PISSN: 21598274     EISSN: 21598290     Source Type: Journal    
DOI: 10.1158/2159-8290.CD-14-1057     Document Type: Article
Times cited : (52)

References (51)
  • 3
    • 33947321589 scopus 로고    scopus 로고
    • What should a urologist know about hereditary predisposition to prostate cancer?
    • discussion 7-8
    • Bratt O. What should a urologist know about hereditary predisposition to prostate cancer? BJU Int 2007; 99: 743-7; discussion 7-8.
    • (2007) BJU Int , vol.99 , pp. 743-747
    • Bratt, O.1
  • 5
    • 84922011640 scopus 로고    scopus 로고
    • A meta-analysis of 87,040 individuals identifies 23 new susceptibility loci for prostate cancer
    • Al Olama AA, Kote-Jarai Z, Berndt SI, Conti DV, Schumacher F, H an Y, et al. A meta-analysis of 87,040 individuals identifies 23 new susceptibility loci for prostate cancer. Nat Genet 2014; 46: 1103-9.
    • (2014) Nat Genet , vol.46 , pp. 1103-1109
    • Al Olama, A.A.1    Kote-Jarai, Z.2    Berndt, S.I.3    Conti, D.V.4    Schumacher, F.5    Han, Y.6
  • 9
    • 78651302621 scopus 로고    scopus 로고
    • M icroRNA-181a modulates gene expression of zinc finger family members by directly targeting their coding regions
    • Huang S, Wu S, Ding J, Lin J, Wei L, Gu J, et al. M icroRNA-181a modulates gene expression of zinc finger family members by directly targeting their coding regions. Nucleic Acids Res 2010; 38: 7211-8.
    • (2010) Nucleic Acids Res , vol.38 , pp. 7211-7218
    • Huang, S.1    Wu, S.2    Ding, J.3    Lin, J.4    Wei, L.5    Gu, J.6
  • 10
    • 84884988122 scopus 로고    scopus 로고
    • microRNA control of mouse and human pluripotent stem cell behavior
    • Greve TS, Judson RL, Blelloch R. microRNA control of mouse and human pluripotent stem cell behavior. Annu Rev Cell Dev Biol 2013; 29: 213- 39.
    • (2013) Annu Rev Cell Dev Biol , vol.29 , pp. 213-239
    • Greve, T.S.1    Judson, R.L.2    Blelloch, R.3
  • 11
    • 84884514267 scopus 로고    scopus 로고
    • Developing microRNA screening as a functional genomics tool for disease research
    • Lemons D, Maurya MR, Subramaniam S, Mercola M. Developing microRNA screening as a functional genomics tool for disease research. Front Physiol 2013; 4: 223.
    • (2013) Front Physiol , vol.4 , pp. 223
    • Lemons, D.1    Maurya, M.R.2    Subramaniam, S.3    Mercola, M.4
  • 14
    • 84885062248 scopus 로고    scopus 로고
    • Downregulation of microRNA-515-5p by the estrogen receptor modulates sphingosine kinase 1 and breast cancer cell proliferation
    • Pinho FG, Frampton AE, Nunes J, Krell J, Alshaker H, Jacob J, et al. Downregulation of microRNA-515-5p by the estrogen receptor modulates sphingosine kinase 1 and breast cancer cell proliferation. Cancer Res 2013; 73: 5936-48.
    • (2013) Cancer Res , vol.73 , pp. 5936-5948
    • Pinho, F.G.1    Frampton, A.E.2    Nunes, J.3    Krell, J.4    Alshaker, H.5    Jacob, J.6
  • 15
    • 60149084560 scopus 로고    scopus 로고
    • MicroRNAs and cancer: Short RNAs go a long way
    • Ventura A, Jacks T. MicroRNAs and cancer: short RNAs go a long way. Cell 2009; 136: 586-91.
    • (2009) Cell , vol.136 , pp. 586-591
    • Ventura, A.1    Jacks, T.2
  • 16
    • 77957037880 scopus 로고    scopus 로고
    • Validation of suitable endogenous control genes for expression studies of miRNA in prostate cancer tissues
    • Carlsson J, Helenius G, Karlsson M, Lubovac Z, Andren O, Olsson B, et al. Validation of suitable endogenous control genes for expression studies of miRNA in prostate cancer tissues. Cancer Genet Cytogenet 2010; 202: 71- 5.
    • (2010) Cancer Genet Cytogenet , vol.202 , pp. 71-75
    • Carlsson, J.1    Helenius, G.2    Karlsson, M.3    Lubovac, Z.4    Andren, O.5    Olsson, B.6
  • 18
    • 60149088848 scopus 로고    scopus 로고
    • Origins and mechanisms of miRNAs and siRNAs
    • Carthew RW, Sontheimer EJ. Origins and mechanisms of miRNAs and siRNAs. Cell 2009; 136: 642-55.
    • (2009) Cell , vol.136 , pp. 642-655
    • Carthew, R.W.1    Sontheimer, E.J.2
  • 20
    • 77956763087 scopus 로고    scopus 로고
    • MicroRNA binding site polymorphisms as biomarkers of cancer risk
    • Pelletier C, Weidhaas JB. MicroRNA binding site polymorphisms as biomarkers of cancer risk. Expert Rev Mol Diagn 2010; 10: 817- 29.
    • (2010) Expert Rev Mol Diagn , vol.10 , pp. 817-829
    • Pelletier, C.1    Weidhaas, J.B.2
  • 21
    • 78649977193 scopus 로고    scopus 로고
    • Genetic variants in MicroRNA biosynthesis pathways and binding sites modify ovarian cancer risk, survival, and treatment response
    • Liang D, Meyer L, Chang DW, Lin J, Pu X, Ye Y, et al. Genetic variants in MicroRNA biosynthesis pathways and binding sites modify ovarian cancer risk, survival, and treatment response. Cancer Res 2010; 70: 9765- 76.
    • (2010) Cancer Res , vol.70 , pp. 9765-9776
    • Liang, D.1    Meyer, L.2    Chang, D.W.3    Lin, J.4    Pu, X.5    Ye, Y.6
  • 22
    • 84895816246 scopus 로고    scopus 로고
    • Genetic variants in the integrin gene predicted microRNA-binding sites were associated with the risk of prostate cancer
    • Liu J, Huang J, He Y, Liu J, Liao B, Liao G. Genetic variants in the integrin gene predicted microRNA-binding sites were associated with the risk of prostate cancer. Mol Carcinog 2014; 53: 280-5.
    • (2014) Mol Carcinog , vol.53 , pp. 280-285
    • Liu, J.1    Huang, J.2    He, Y.3    Liu, J.4    Liao, B.5    Liao, G.6
  • 23
    • 79951848613 scopus 로고    scopus 로고
    • Polymorphisms inside microRNAs and microRNA target sites predict clinical outcomes in prostate cancer patients receiving androgen-deprivation therapy
    • Bao BY, Pao JB, Huang CN, Pu YS, Chang TY, Lan YH, et al. Polymorphisms inside microRNAs and microRNA target sites predict clinical outcomes in prostate cancer patients receiving androgen-deprivation therapy. Clin Cancer Res 2011; 17: 928-36.
    • (2011) Clin Cancer Res , vol.17 , pp. 928-936
    • Bao, B.Y.1    Pao, J.B.2    Huang, C.N.3    Pu, Y.S.4    Chang, T.Y.5    Lan, Y.H.6
  • 26
    • 81755162937 scopus 로고    scopus 로고
    • Association between Prostinogen (KLK15) genetic variants and prostate cancer risk and aggressiveness in Australia and a meta-analysis of GWAS data
    • Batra J, Lose F, O'Mara T, Marquart L, Stephens C, Alexander K, et al. Association between Prostinogen (KLK15) genetic variants and prostate cancer risk and aggressiveness in Australia and a meta-analysis of GWAS data. PLoS One 2011;6:e26527.
    • (2011) PLoS One , vol.6
    • Batra, J.1    Lose, F.2    O'Mara, T.3    Marquart, L.4    Stephens, C.5    Alexander, K.6
  • 29
    • 67849101182 scopus 로고    scopus 로고
    • SNPinfo: Integrating GWAS and candidate gene information into functional SNP selection for genetic association studies
    • Xu Z, Taylor JA. SNPinfo: integrating GWAS and candidate gene information into functional SNP selection for genetic association studies. Nucleic Acids Res 2009; 37: W600-5.
    • (2009) Nucleic Acids Res , vol.37 , pp. W600-W605
    • Xu, Z.1    Taylor, J.A.2
  • 30
    • 80052476453 scopus 로고    scopus 로고
    • Inferring causative variants in micro- RNA target sites
    • Thomas LF, Saito T, Saetrom P. Inferring causative variants in micro- RNA target sites. Nucleic Acids Res 2011; 39: e109.
    • (2011) Nucleic Acids Res , vol.39
    • Thomas, L.F.1    Saito, T.2    Saetrom, P.3
  • 31
    • 78049420577 scopus 로고    scopus 로고
    • MicroSNiPer: A web tool for prediction of SNP effects on putative microRNA targets
    • Barenboim M, Zoltick BJ, Guo Y, Weinberger DR. MicroSNiPer: a web tool for prediction of SNP effects on putative microRNA targets. Hum Mutat 2010; 31: 1223-32.
    • (2010) Hum Mutat , vol.31 , pp. 1223-1232
    • Barenboim, M.1    Zoltick, B.J.2    Guo, Y.3    Weinberger, D.R.4
  • 33
    • 78651394912 scopus 로고    scopus 로고
    • Identification of new microRNAs in paired normal and tumor breast tissue suggests a dual role for the ERBB2/Her2 gene
    • Persson H, Kvist A, Rego N, Staaf J, Vallon-Christersson J, Luts L, et al. Identification of new microRNAs in paired normal and tumor breast tissue suggests a dual role for the ERBB2/Her2 gene. Cancer Res 2011; 71: 78-86.
    • (2011) Cancer Res , vol.71 , pp. 78-86
    • Persson, H.1    Kvist, A.2    Rego, N.3    Staaf, J.4    Vallon-Christersson, J.5    Luts, L.6
  • 34
    • 84880399358 scopus 로고    scopus 로고
    • Serum microRNA expression levels can predict lymph node metastasis in patients with early-stage cervical squamous cell carcinoma
    • Chen J, Yao D, Li Y, Chen H, He C, Ding N, et al. Serum microRNA expression levels can predict lymph node metastasis in patients with early-stage cervical squamous cell carcinoma. Int J Mol Med 2013; 32: 557-67.
    • (2013) Int J Mol Med , vol.32 , pp. 557-567
    • Chen, J.1    Yao, D.2    Li, Y.3    Chen, H.4    He, C.5    Ding, N.6
  • 35
    • 80053970951 scopus 로고    scopus 로고
    • Tumor-specific usage of alternative transcription start sites in colorectal cancer identified by genome-wide exon array analysis
    • Thorsen K, Schepeler T, Oster B, Rasmussen MH, Vang S, Wang K, et al. Tumor-specific usage of alternative transcription start sites in colorectal cancer identified by genome-wide exon array analysis. BMC Genomics 2011; 12: 505.
    • (2011) BMC Genomics , vol.12 , pp. 505
    • Thorsen, K.1    Schepeler, T.2    Oster, B.3    Rasmussen, M.H.4    Vang, S.5    Wang, K.6
  • 36
    • 51049123624 scopus 로고    scopus 로고
    • Genomic profiling of microRNA and messenger RNA reveals deregulated microRNA expression in prostate cancer
    • Ambs S, Prueitt RL, Yi M, Hudson RS, Howe TM, Petrocca F, et al. Genomic profiling of microRNA and messenger RNA reveals deregulated microRNA expression in prostate cancer. Cancer Res 2008; 68: 6162- 70.
    • (2008) Cancer Res , vol.68 , pp. 6162-6170
    • Ambs, S.1    Prueitt, R.L.2    Yi, M.3    Hudson, R.S.4    Howe, T.M.5    Petrocca, F.6
  • 37
    • 79960924160 scopus 로고    scopus 로고
    • Seven prostate cancer susceptibility loci identified by a multistage genome-wide association study
    • Kote-Jarai Z, Olama AA, Giles GG, Severi G, Schleutker J, Weischer M, et al. Seven prostate cancer susceptibility loci identified by a multistage genome-wide association study. Nat Genet 2011; 43: 785-91.
    • (2011) Nat Genet , vol.43 , pp. 785-791
    • Kote-Jarai, Z.1    Olama, A.A.2    Giles, G.G.3    Severi, G.4    Schleutker, J.5    Weischer, M.6
  • 38
    • 84924600296 scopus 로고    scopus 로고
    • Kallikreins are involved in an miRNA network that contributes to prostate cancer progression
    • Samaan S, Lichner Z, Ding Q, Saleh C, Samuel J, Streutker C, et al. Kallikreins are involved in an miRNA network that contributes to prostate cancer progression. Biol Chem 2014; 395: 991-1001.
    • (2014) Biol Chem , vol.395 , pp. 991-1001
    • Samaan, S.1    Lichner, Z.2    Ding, Q.3    Saleh, C.4    Samuel, J.5    Streutker, C.6
  • 39
    • 77955373045 scopus 로고    scopus 로고
    • Kallikreins on steroids: Structure, function, and hormonal regulation of prostate-specific antigen and the extended kallikrein locus
    • Lawrence MG, Lai J, Clements JA. Kallikreins on steroids: structure, function, and hormonal regulation of prostate-specific antigen and the extended kallikrein locus. Endocr Rev 2010; 31: 407-46.
    • (2010) Endocr Rev , vol.31 , pp. 407-446
    • Lawrence, M.G.1    Lai, J.2    Clements, J.A.3
  • 40
    • 84883254543 scopus 로고    scopus 로고
    • Prostatespecific kallikrein-related peptidases and their relation to prostate cancer biology and detection. Established relevance and emerging roles
    • Thorek DL, Evans MJ, Carlsson SV, Ulmert D, Lilja H. Prostatespecific kallikrein-related peptidases and their relation to prostate cancer biology and detection. Established relevance and emerging roles. Thromb Haemost 2013; 110: 484-92.
    • (2013) Thromb Haemost , vol.110 , pp. 484-492
    • Thorek, D.L.1    Evans, M.J.2    Carlsson, S.V.3    Ulmert, D.4    Lilja, H.5
  • 41
    • 0033956954 scopus 로고    scopus 로고
    • Prognostic significance of tissue prostate-specific antigen in endocrine-treated prostate carcinomas
    • Stege R, Grande M, Carlstrom K, Tribukait B, Pousette A. Prognostic significance of tissue prostate-specific antigen in endocrine-treated prostate carcinomas. Clin Cancer Res 2000; 6: 160-5.
    • (2000) Clin Cancer Res , vol.6 , pp. 160-165
    • Stege, R.1    Grande, M.2    Carlstrom, K.3    Tribukait, B.4    Pousette, A.5
  • 43
  • 44
    • 44849091712 scopus 로고    scopus 로고
    • Structural characterization and anti-angiogenic properties of prostatespecific antigen isoforms in seminal fluid
    • Mattsson JM, Valmu L, Laakkonen P, Stenman UH, Koistinen H. Structural characterization and anti-angiogenic properties of prostatespecific antigen isoforms in seminal fluid. Prostate 2008; 68: 9 45-54.
    • (2008) P rostate , vol.68 , pp. 945-954
    • Mattsson, J.M.1    Valmu, L.2    Laakkonen, P.3    Stenman, U.H.4    Koistinen, H.5
  • 45
    • 84865513594 scopus 로고    scopus 로고
    • Peptides binding to prostate-specific antigen enhance its antiangiogenic activity
    • Mattsson JM, Narvanen A, Stenman UH, Koistinen H. Peptides binding to prostate-specific antigen enhance its antiangiogenic activity. Prostate 2012; 72: 1588-94.
    • (2012) Prostate , vol.72 , pp. 1588-1594
    • Mattsson, J.M.1    Narvanen, A.2    Stenman, U.H.3    Koistinen, H.4
  • 47
    • 80051937839 scopus 로고    scopus 로고
    • Vesicleassociated membrane protein 8 (VAMP8) is a SNARE (soluble N-ethylmaleimide-sensitive factor attachment protein receptor) selectively required for sequential granule-to-granule fusion
    • Behrendorff N, Dolai S, Hong W, Gaisano HY, Thorn P. Vesicleassociated membrane protein 8 (VAMP8) is a SNARE (soluble N-ethylmaleimide-sensitive factor attachment protein receptor) selectively required for sequential granule-to-granule fusion. J Biol Chem 2011; 286: 29627-34.
    • (2011) J Biol Chem , vol.286 , pp. 29627-29634
    • Behrendorff, N.1    Dolai, S.2    Hong, W.3    Gaisano, H.Y.4    Thorn, P.5
  • 48
    • 78751545365 scopus 로고    scopus 로고
    • Enhanced energy expenditure, glucose utilization, and insulin sensitivity in VAMP8 null mice
    • Zong H, Wang CC, Vaitheesvaran B, Kurland IJ, Hong W, Pessin JE. Enhanced energy expenditure, glucose utilization, and insulin sensitivity in VAMP8 null mice. Diabetes 2011; 60: 30-8.
    • (2011) Diabetes , vol.60 , pp. 30-38
    • Zong, H.1    Wang, C.C.2    Vaitheesvaran, B.3    Kurland, I.J.4    Hong, W.5    Pessin, J.E.6
  • 49
    • 84864686196 scopus 로고    scopus 로고
    • Dual role of VAMP8 in regulating insulin exocytosis and islet beta cell growth
    • Zhu D, Zhang Y, Lam PP, Dolai S, Liu Y, Cai EP, et al. Dual role of VAMP8 in regulating insulin exocytosis and islet beta cell growth. Cell Metab 2012; 16: 238-49.
    • (2012) Cell Metab , vol.16 , pp. 238-249
    • Zhu, D.1    Zhang, Y.2    Lam, P.P.3    Dolai, S.4    Liu, Y.5    Cai, E.P.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.