메뉴 건너뛰기




Volumn 35, Issue , 2017, Pages 61-67

The evolution of microRNAs in plants

Author keywords

[No Author keywords available]

Indexed keywords

MICRORNA; PLANT RNA; TRANSPOSON;

EID: 84996866876     PISSN: 13695266     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.pbi.2016.11.006     Document Type: Review
Times cited : (120)

References (49)
  • 2
    • 84880770383 scopus 로고    scopus 로고
    • Diversifying microRNA sequence and function
    • 2 Ameres, S.L., Zamore, P.D., Diversifying microRNA sequence and function. Nat Rev Mol Cell Biol 14 (2013), 475–488.
    • (2013) Nat Rev Mol Cell Biol , vol.14 , pp. 475-488
    • Ameres, S.L.1    Zamore, P.D.2
  • 3
    • 84862779295 scopus 로고    scopus 로고
    • Functions of microRNAs in plant stress responses
    • 3 Sunkar, R., Li, Y.-F., Jagadeeswaran, G., Functions of microRNAs in plant stress responses. Trends Plant Sci 17 (2012), 196–203.
    • (2012) Trends Plant Sci , vol.17 , pp. 196-203
    • Sunkar, R.1    Li, Y.-F.2    Jagadeeswaran, G.3
  • 4
    • 84899487011 scopus 로고    scopus 로고
    • Sample sequencing of vascular plants demonstrates widespread conservation and divergence of microRNAs
    • In this study, the authors sequenced small RNAs from algae and from representative species across vascular plants, identified miRNAs, and characterized the five main features of these miRNAs. This study provided an overview of miRNAs across the plant kingdom for the first time and set the foundation for future studies on miRNA evolution.
    • 4•• Chávez Montes, R.A., de Fátima Rosas-Cárdenas, F., De Paoli, E., Accerbi, M., Rymarquis, L.A., Mahalingam, G., Marsch-Martínez, N., Meyers, B.C., Green, P.J., de Folter, S., Sample sequencing of vascular plants demonstrates widespread conservation and divergence of microRNAs. Nat Commun, 5, 2014, 3722 In this study, the authors sequenced small RNAs from algae and from representative species across vascular plants, identified miRNAs, and characterized the five main features of these miRNAs. This study provided an overview of miRNAs across the plant kingdom for the first time and set the foundation for future studies on miRNA evolution.
    • (2014) Nat Commun , vol.5 , pp. 3722
    • Chávez Montes, R.A.1    de Fátima Rosas-Cárdenas, F.2    De Paoli, E.3    Accerbi, M.4    Rymarquis, L.A.5    Mahalingam, G.6    Marsch-Martínez, N.7    Meyers, B.C.8    Green, P.J.9    de Folter, S.10
  • 6
    • 84873606896 scopus 로고    scopus 로고
    • Evolution of animal and plant dicers: early parallel duplications and recurrent adaptation of antiviral RNA binding in plants
    • 6 Mukherjee, K., Campos, H., Kolaczkowski, B., Evolution of animal and plant dicers: early parallel duplications and recurrent adaptation of antiviral RNA binding in plants. Mol Biol Evol 30 (2013), 627–641.
    • (2013) Mol Biol Evol , vol.30 , pp. 627-641
    • Mukherjee, K.1    Campos, H.2    Kolaczkowski, B.3
  • 7
    • 84904985459 scopus 로고    scopus 로고
    • Regulation of microRNA biogenesis
    • 7 Ha, M., Kim, V.N., Regulation of microRNA biogenesis. Nat Rev Mol Cell Biol 15 (2014), 509–524.
    • (2014) Nat Rev Mol Cell Biol , vol.15 , pp. 509-524
    • Ha, M.1    Kim, V.N.2
  • 8
    • 60149086351 scopus 로고    scopus 로고
    • Origin, biogenesis, and activity of plant microRNAs
    • 8 Voinnet, O., Origin, biogenesis, and activity of plant microRNAs. Cell 136 (2009), 669–687.
    • (2009) Cell , vol.136 , pp. 669-687
    • Voinnet, O.1
  • 9
    • 84964005584 scopus 로고    scopus 로고
    • Most microRNAs in the single-cell alga Chlamydomonas reinhardtii are produced by Dicer-like 3-mediated cleavage of introns and untranslated regions of coding RNAs
    • This study provided new evidence supporting that miRNA pathways in plants and animals might have had a common origin but underwent parallel evolution. The authors employed a forward genetic screen and identified DCL3 as an important miRNA biogenesis factor for the unicellular model plant, Chlamydomonas reinhardtii. The Chlamydomonas DCL3 protein shows similarity to Drosha in animals. Other features of Chlamydonomas miRNAs, such as miRNA gene distribution within introns of protein coding genes and the location of miRNA target sites in the 3′ UTR of target genes, are similar to those in animals rather than higher plants.
    • 9•• Valli, A.A., Santos, B.A.C.M., Hnatova, S., Bassett, A.R., Molnar, A., Chung, B.Y., Baulcombe, D.C., Most microRNAs in the single-cell alga Chlamydomonas reinhardtii are produced by Dicer-like 3-mediated cleavage of introns and untranslated regions of coding RNAs. Genome Res 26 (2016), 519–529 This study provided new evidence supporting that miRNA pathways in plants and animals might have had a common origin but underwent parallel evolution. The authors employed a forward genetic screen and identified DCL3 as an important miRNA biogenesis factor for the unicellular model plant, Chlamydomonas reinhardtii. The Chlamydomonas DCL3 protein shows similarity to Drosha in animals. Other features of Chlamydonomas miRNAs, such as miRNA gene distribution within introns of protein coding genes and the location of miRNA target sites in the 3′ UTR of target genes, are similar to those in animals rather than higher plants.
    • (2016) Genome Res , vol.26 , pp. 519-529
    • Valli, A.A.1    Santos, B.A.C.M.2    Hnatova, S.3    Bassett, A.R.4    Molnar, A.5    Chung, B.Y.6    Baulcombe, D.C.7
  • 10
    • 84890252624 scopus 로고    scopus 로고
    • Complementarity to an miRNA seed region is sufficient to induce moderate repression of a target transcript in the unicellular green alga Chlamydomonas reinhardtii
    • This work revealed that complementarity to the seed region of a miRNA is sufficient for target recognition by this miRNA in the green alga Chlamydomonas reinhardtii. The findings in this study, along with those in Ref. [9], suggest that miRNA biogenesis and action in Chlamydomonas resemble those in metazoans.
    • 10• Yamasaki, T., Voshall, A., Kim, E.J., Moriyama, E., Cerutti, H., Ohama, T., Complementarity to an miRNA seed region is sufficient to induce moderate repression of a target transcript in the unicellular green alga Chlamydomonas reinhardtii. Plant J 76 (2013), 1045–1056 This work revealed that complementarity to the seed region of a miRNA is sufficient for target recognition by this miRNA in the green alga Chlamydomonas reinhardtii. The findings in this study, along with those in Ref. [9], suggest that miRNA biogenesis and action in Chlamydomonas resemble those in metazoans.
    • (2013) Plant J , vol.76 , pp. 1045-1056
    • Yamasaki, T.1    Voshall, A.2    Kim, E.J.3    Moriyama, E.4    Cerutti, H.5    Ohama, T.6
  • 11
    • 0037224921 scopus 로고    scopus 로고
    • A biochemical framework for RNA silencing in plants
    • 11 Tang, G., Reinhart, B.J., Bartel, D.P., Zamore, P.D., A biochemical framework for RNA silencing in plants. Genes Dev 17 (2003), 49–63.
    • (2003) Genes Dev , vol.17 , pp. 49-63
    • Tang, G.1    Reinhart, B.J.2    Bartel, D.P.3    Zamore, P.D.4
  • 12
    • 84923870929 scopus 로고    scopus 로고
    • Molecular evolution and diversification of the Argonaute family of proteins in plants
    • 12 Singh, R.K., Gase, K., Baldwin, I.T., Pandey, S.P., Molecular evolution and diversification of the Argonaute family of proteins in plants. BMC Plant Biol, 15, 2015, 23.
    • (2015) BMC Plant Biol , vol.15 , pp. 23
    • Singh, R.K.1    Gase, K.2    Baldwin, I.T.3    Pandey, S.P.4
  • 13
    • 84937112193 scopus 로고    scopus 로고
    • Evolution, functions, and mysteries of plant ARGONAUTE proteins
    • This review article summarizes recent progress in studies of AGO proteins in both eudicots and monocots, especially in Arabidopsis and rice, and designates a new nomenclature for plant AGO genes. Moreover, this paper shows that the AGO18 subfamily that functions in reproductive development and viral defense is phylogenetically grass-specific.
    • 13• Zhang, H., Xia, R., Meyers, B.C., Walbot, V., Evolution, functions, and mysteries of plant ARGONAUTE proteins. Curr Opin Plant Biol 27 (2015), 84–90 This review article summarizes recent progress in studies of AGO proteins in both eudicots and monocots, especially in Arabidopsis and rice, and designates a new nomenclature for plant AGO genes. Moreover, this paper shows that the AGO18 subfamily that functions in reproductive development and viral defense is phylogenetically grass-specific.
    • (2015) Curr Opin Plant Biol , vol.27 , pp. 84-90
    • Zhang, H.1    Xia, R.2    Meyers, B.C.3    Walbot, V.4
  • 14
    • 84964694489 scopus 로고    scopus 로고
    • Viral-inducible Argonaute18 confers broad-spectrum virus resistance in rice by sequestering a host microRNA
    • 14 Wu, J., Yang, Z., Wang, Y., Zheng, L., Ye, R., Ji, Y., Zhao, S., Ji, S., Liu, R., Xu, L., et al. Viral-inducible Argonaute18 confers broad-spectrum virus resistance in rice by sequestering a host microRNA. eLife, 4, 2015, 356.
    • (2015) eLife , vol.4 , pp. 356
    • Wu, J.1    Yang, Z.2    Wang, Y.3    Zheng, L.4    Ye, R.5    Ji, Y.6    Zhao, S.7    Ji, S.8    Liu, R.9    Xu, L.10
  • 15
    • 84931830801 scopus 로고    scopus 로고
    • Identification and characterization of Argonaute gene family and meiosis-enriched Argonaute during sporogenesis in maize
    • 15 Zhai, L., Sun, W., Zhang, K., Jia, H., Liu, L., Liu, Z., Teng, F., Zhang, Z., Identification and characterization of Argonaute gene family and meiosis-enriched Argonaute during sporogenesis in maize. J Integr Plant Biol 56 (2014), 1042–1052.
    • (2014) J Integr Plant Biol , vol.56 , pp. 1042-1052
    • Zhai, L.1    Sun, W.2    Zhang, K.3    Jia, H.4    Liu, L.5    Liu, Z.6    Teng, F.7    Zhang, Z.8
  • 16
    • 79953857473 scopus 로고    scopus 로고
    • Arabidopsis Argonaute10 specifically sequesters miR166/165 to regulate shoot apical meristem development
    • 16 Zhu, H., Hu, F., Wang, R., Zhou, X., Sze, S.-H., Liou, L.W., Barefoot, A., Dickman, M., Zhang, X., Arabidopsis Argonaute10 specifically sequesters miR166/165 to regulate shoot apical meristem development. Cell 145 (2011), 242–256.
    • (2011) Cell , vol.145 , pp. 242-256
    • Zhu, H.1    Hu, F.2    Wang, R.3    Zhou, X.4    Sze, S.-H.5    Liou, L.W.6    Barefoot, A.7    Dickman, M.8    Zhang, X.9
  • 17
    • 79953744170 scopus 로고    scopus 로고
    • ARGONAUTE10 and ARGONAUTE1 regulate the termination of floral stem cells through two microRNAs in Arabidopsis
    • 17 Ji, L., Liu, X., Yan, J., Wang, W., Yumul, R.E., Kim, Y.J., Dinh, T.T., Liu, J., Cui, X., Zheng, B., et al. ARGONAUTE10 and ARGONAUTE1 regulate the termination of floral stem cells through two microRNAs in Arabidopsis. PLoS Genet, 7, 2011, e1001358.
    • (2011) PLoS Genet , vol.7 , pp. e1001358
    • Ji, L.1    Liu, X.2    Yan, J.3    Wang, W.4    Yumul, R.E.5    Kim, Y.J.6    Dinh, T.T.7    Liu, J.8    Cui, X.9    Zheng, B.10
  • 18
    • 84960376561 scopus 로고    scopus 로고
    • RNAi in plants: an Argonaute-centered view
    • 18 Fang, X., Qi, Y., RNAi in plants: an Argonaute-centered view. Plant Cell 28 (2016), 272–285.
    • (2016) Plant Cell , vol.28 , pp. 272-285
    • Fang, X.1    Qi, Y.2
  • 21
    • 84922624551 scopus 로고    scopus 로고
    • Rapid divergence and high diversity of miRNAs and miRNA targets in the Camelineae
    • 21 Smith, L.M., Burbano, H.A., Wang, X., Fitz, J., Wang, G., Ural-Blimke, Y., Weigel, D., Rapid divergence and high diversity of miRNAs and miRNA targets in the Camelineae. Plant J 81 (2015), 597–610.
    • (2015) Plant J , vol.81 , pp. 597-610
    • Smith, L.M.1    Burbano, H.A.2    Wang, X.3    Fitz, J.4    Wang, G.5    Ural-Blimke, Y.6    Weigel, D.7
  • 22
    • 84956828178 scopus 로고    scopus 로고
    • Global investigation of the co-evolution of MIRNA genes and microRNA targets during soybean domestication
    • 22 Liu, T., Fang, C., Ma, Y., Shen, Y., Li, C., Li, Q., Wang, M., Liu, S., Zhang, J., Zhou, Z., et al. Global investigation of the co-evolution of MIRNA genes and microRNA targets during soybean domestication. Plant J 85 (2016), 396–409.
    • (2016) Plant J , vol.85 , pp. 396-409
    • Liu, T.1    Fang, C.2    Ma, Y.3    Shen, Y.4    Li, C.5    Li, Q.6    Wang, M.7    Liu, S.8    Zhang, J.9    Zhou, Z.10
  • 23
    • 84931272721 scopus 로고    scopus 로고
    • Computational prediction of miRNAs and their targets in Phaseolus vulgaris using simple sequence repeat signatures
    • 23 Nithin, C., Patwa, N., Thomas, A., Bahadur, R.P., Basak, J., Computational prediction of miRNAs and their targets in Phaseolus vulgaris using simple sequence repeat signatures. BMC Plant Biol, 15, 2015, 140.
    • (2015) BMC Plant Biol , vol.15 , pp. 140
    • Nithin, C.1    Patwa, N.2    Thomas, A.3    Bahadur, R.P.4    Basak, J.5
  • 24
    • 84956900417 scopus 로고    scopus 로고
    • Impacts of whole-genome triplication on MIRNA evolution in Brassica rapa
    • 24 Sun, C., Wu, J., Liang, J., Schnable, J.C., Yang, W., Cheng, F., Wang, X., Impacts of whole-genome triplication on MIRNA evolution in Brassica rapa. Genome Biol Evol 7 (2015), 3085–3096.
    • (2015) Genome Biol Evol , vol.7 , pp. 3085-3096
    • Sun, C.1    Wu, J.2    Liang, J.3    Schnable, J.C.4    Yang, W.5    Cheng, F.6    Wang, X.7
  • 25
    • 84898052115 scopus 로고    scopus 로고
    • Origin, inheritance, and gene regulatory consequences of genome dominance in polyploids
    • 25 Woodhouse, M.R., Cheng, F., Pires, J.C., Lisch, D., Freeling, M., Wang, X., Origin, inheritance, and gene regulatory consequences of genome dominance in polyploids. Proc Natl Acad Sci USA 111 (2014), 5283–5288.
    • (2014) Proc Natl Acad Sci USA , vol.111 , pp. 5283-5288
    • Woodhouse, M.R.1    Cheng, F.2    Pires, J.C.3    Lisch, D.4    Freeling, M.5    Wang, X.6
  • 26
    • 9644272448 scopus 로고    scopus 로고
    • Evolution of microRNA genes by inverted duplication of target gene sequences in Arabidopsis thaliana
    • 26 Allen, E., Xie, Z., Gustafson, A.M., Sung, G.-H., Spatafora, J.W., Carrington, J.C., Evolution of microRNA genes by inverted duplication of target gene sequences in Arabidopsis thaliana. Nat Genet 36 (2004), 1282–1290.
    • (2004) Nat Genet , vol.36 , pp. 1282-1290
    • Allen, E.1    Xie, Z.2    Gustafson, A.M.3    Sung, G.-H.4    Spatafora, J.W.5    Carrington, J.C.6
  • 28
    • 84893481172 scopus 로고    scopus 로고
    • Two young MicroRNAs originating from target duplication mediate nitrogen starvation adaptation via regulation of glucosinolate synthesis in Arabidopsis thaliana
    • 28 He, H., Liang, G., Li, Y., Wang, F., Yu, D., Two young MicroRNAs originating from target duplication mediate nitrogen starvation adaptation via regulation of glucosinolate synthesis in Arabidopsis thaliana. Plant Physiol 164 (2014), 853–865.
    • (2014) Plant Physiol , vol.164 , pp. 853-865
    • He, H.1    Liang, G.2    Li, Y.3    Wang, F.4    Yu, D.5
  • 29
    • 84940919383 scopus 로고    scopus 로고
    • Novel and recently evolved microRNA clusters regulate expansive F-BOX gene networks through phased small interfering RNAs in wild diploid strawberry
    • 29 Xia, R., Ye, S., Liu, Z., Meyers, B.C., Liu, Z., Novel and recently evolved microRNA clusters regulate expansive F-BOX gene networks through phased small interfering RNAs in wild diploid strawberry. Plant Physiol 169 (2015), 594–610.
    • (2015) Plant Physiol , vol.169 , pp. 594-610
    • Xia, R.1    Ye, S.2    Liu, Z.3    Meyers, B.C.4    Liu, Z.5
  • 30
    • 48249109932 scopus 로고    scopus 로고
    • Structurally different alleles of the ath-MIR824 microRNA precursor are maintained at high frequency in Arabidopsis thaliana
    • 30 de Meaux, J., Hu, J.-Y., Tartler, U., Goebel, U., Structurally different alleles of the ath-MIR824 microRNA precursor are maintained at high frequency in Arabidopsis thaliana. Proc Natl Acad Sci USA 105 (2008), 8994–8999.
    • (2008) Proc Natl Acad Sci USA , vol.105 , pp. 8994-8999
    • de Meaux, J.1    Hu, J.-Y.2    Tartler, U.3    Goebel, U.4
  • 32
    • 42449099982 scopus 로고    scopus 로고
    • Dual coding of siRNAs and miRNAs by plant transposable elements
    • 32 Piriyapongsa, J., Jordan, I.K., Dual coding of siRNAs and miRNAs by plant transposable elements. RNA 14 (2008), 814–821.
    • (2008) RNA , vol.14 , pp. 814-821
    • Piriyapongsa, J.1    Jordan, I.K.2
  • 33
    • 79955780739 scopus 로고    scopus 로고
    • Domestication of transposable elements into microRNA genes in plants
    • 33 Li, Y., Li, C., Xia, J., Jin, Y., Domestication of transposable elements into microRNA genes in plants. PLoS ONE, 6, 2011, e19212.
    • (2011) PLoS ONE , vol.6 , pp. e19212
    • Li, Y.1    Li, C.2    Xia, J.3    Jin, Y.4
  • 34
    • 84888804429 scopus 로고    scopus 로고
    • TamiR1123 originated from a family of miniature inverted-repeat transposable elements (MITE) including one inserted in the Vrn-A1a promoter in wheat
    • 34 Yu, M., Carver, B.F., Yan, L., TamiR1123 originated from a family of miniature inverted-repeat transposable elements (MITE) including one inserted in the Vrn-A1a promoter in wheat. Plant Sci 215–216 (2014), 117–123.
    • (2014) Plant Sci , vol.215-216 , pp. 117-123
    • Yu, M.1    Carver, B.F.2    Yan, L.3
  • 36
    • 84957440363 scopus 로고    scopus 로고
    • Functional and evolutionary analyses of the miR156 and miR529 families in land plants
    • This study provided a clear example for the birth, divergence and death of MIR genes, which will provoke further thoughts on MIR gene evolution. Phylogenetic analysis revealed the distinct evolutionary patterns of miR156, miR529 and their target sites. Further genetic analysis showed that the miR529 target sites in several SPL genes are still functional in Arabidopsis in which miR529 has been lost, suggesting asymmetric evolution for miRNAs and targets. The study also revealed the partially redundant functions of the evolutionarily related miR156 and miR529.
    • 36• Morea, E.G.O., da Silva, E.M., e Silva, G.F.F., Valente, G.T., Barrera Rojas, C.H., Vincentz, M., Nogueira, F.T.S., Functional and evolutionary analyses of the miR156 and miR529 families in land plants. BMC Plant Biol, 16, 2016, 40 This study provided a clear example for the birth, divergence and death of MIR genes, which will provoke further thoughts on MIR gene evolution. Phylogenetic analysis revealed the distinct evolutionary patterns of miR156, miR529 and their target sites. Further genetic analysis showed that the miR529 target sites in several SPL genes are still functional in Arabidopsis in which miR529 has been lost, suggesting asymmetric evolution for miRNAs and targets. The study also revealed the partially redundant functions of the evolutionarily related miR156 and miR529.
    • (2016) BMC Plant Biol , vol.16 , pp. 40
    • Morea, E.G.O.1    da Silva, E.M.2    e Silva, G.F.F.3    Valente, G.T.4    Barrera Rojas, C.H.5    Vincentz, M.6    Nogueira, F.T.S.7
  • 37
    • 84974528120 scopus 로고    scopus 로고
    • Small RNA transcriptomes of mangroves evolve adaptively in extreme environments
    • 37 Wen, M., Lin, X., Xie, M., Wang, Y., Shen, X., Liufu, Z., Wu, C.-I., Shi, S., Tang, T., Small RNA transcriptomes of mangroves evolve adaptively in extreme environments. Sci Rep, 6, 2016, 27551.
    • (2016) Sci Rep , vol.6 , pp. 27551
    • Wen, M.1    Lin, X.2    Xie, M.3    Wang, Y.4    Shen, X.5    Liufu, Z.6    Wu, C.-I.7    Shi, S.8    Tang, T.9
  • 38
    • 84879466274 scopus 로고    scopus 로고
    • MicroRNA superfamilies descended from miR390 and their roles in secondary small interfering RNA biogenesis in eudicots
    • 38 Xia, R., Meyers, B.C., Liu, Z., Beers, E.P., Ye, S., Liu, Z., MicroRNA superfamilies descended from miR390 and their roles in secondary small interfering RNA biogenesis in eudicots. Plant Cell 25 (2013), 1555–1572.
    • (2013) Plant Cell , vol.25 , pp. 1555-1572
    • Xia, R.1    Meyers, B.C.2    Liu, Z.3    Beers, E.P.4    Ye, S.5    Liu, Z.6
  • 39
    • 84925538119 scopus 로고    scopus 로고
    • Genome-wide identification and evolutionary analysis of positively selected miRNA genes in domesticated rice
    • 39 Liu, Q., Wang, H., Hu, H., Zhang, H., Genome-wide identification and evolutionary analysis of positively selected miRNA genes in domesticated rice. Mol Genet Genomics 290 (2015), 593–602.
    • (2015) Mol Genet Genomics , vol.290 , pp. 593-602
    • Liu, Q.1    Wang, H.2    Hu, H.3    Zhang, H.4
  • 40
    • 84881049176 scopus 로고    scopus 로고
    • Identification of phasiRNAs in wild rice (Oryza rufipogon)
    • 40 Liu, Y., Wang, Y., Zhu, Q.-H., Fan, L., Identification of phasiRNAs in wild rice (Oryza rufipogon). Plant Signal Behav, 2013, 8.
    • (2013) Plant Signal Behav , pp. 8
    • Liu, Y.1    Wang, Y.2    Zhu, Q.-H.3    Fan, L.4
  • 42
    • 84973594916 scopus 로고    scopus 로고
    • Adaptive evolution and functional innovation of Populus-specific recently evolved microRNAs
    • 42 Xie, J., Yang, X., Song, Y., Du, Q., Li, Y., Chen, J., Zhang, D., Adaptive evolution and functional innovation of Populus-specific recently evolved microRNAs. New Phytol, 2016, 10.1111/nph.14046.
    • (2016) New Phytol
    • Xie, J.1    Yang, X.2    Song, Y.3    Du, Q.4    Li, Y.5    Chen, J.6    Zhang, D.7
  • 43
    • 84883166485 scopus 로고    scopus 로고
    • Phased, secondary, small interfering RNAs in posttranscriptional regulatory networks
    • 43 Fei, Q., Xia, R., Meyers, B.C., Phased, secondary, small interfering RNAs in posttranscriptional regulatory networks. Plant Cell 25 (2013), 2400–2415.
    • (2013) Plant Cell , vol.25 , pp. 2400-2415
    • Fei, Q.1    Xia, R.2    Meyers, B.C.3
  • 44
    • 33750440526 scopus 로고    scopus 로고
    • A two-hit trigger for siRNA biogenesis in plants
    • 44 Axtell, M.J., Jan, C., Rajagopalan, R., Bartel, D.P., A two-hit trigger for siRNA biogenesis in plants. Cell 127 (2006), 565–577.
    • (2006) Cell , vol.127 , pp. 565-577
    • Axtell, M.J.1    Jan, C.2    Rajagopalan, R.3    Bartel, D.P.4
  • 45
    • 84927709627 scopus 로고    scopus 로고
    • Evolutionary patterns and coevolutionary consequences of MIRNA genes and microRNA targets triggered by multiple mechanisms of genomic duplications in soybean
    • Through globally analyzing MIR genes in the soybean genome, the authors found that the retention of duplicated MIR genes is correlated with that of adjacent protein-coding genes, and with the functions of miRNAs. Also, the retention of target genes contributes to the retention of MIR genes, which reflects a new aspect of miRNA–target relationship and co-evolution.
    • 45•• Zhao, M., Meyers, B.C., Cai, C., Xu, W., Ma, J., Evolutionary patterns and coevolutionary consequences of MIRNA genes and microRNA targets triggered by multiple mechanisms of genomic duplications in soybean. Plant Cell 27 (2015), 546–562 Through globally analyzing MIR genes in the soybean genome, the authors found that the retention of duplicated MIR genes is correlated with that of adjacent protein-coding genes, and with the functions of miRNAs. Also, the retention of target genes contributes to the retention of MIR genes, which reflects a new aspect of miRNA–target relationship and co-evolution.
    • (2015) Plant Cell , vol.27 , pp. 546-562
    • Zhao, M.1    Meyers, B.C.2    Cai, C.3    Xu, W.4    Ma, J.5
  • 46
    • 84994120912 scopus 로고    scopus 로고
    • The diversification of plant NBS-LRR defense genes directs the evolution of MicroRNAs that target them
    • 46 Zhang, Y., Xia, R., Kuang, H., Meyers, B.C., The diversification of plant NBS-LRR defense genes directs the evolution of MicroRNAs that target them. Mol Biol Evol 33 (2016), 2692–2705.
    • (2016) Mol Biol Evol , vol.33 , pp. 2692-2705
    • Zhang, Y.1    Xia, R.2    Kuang, H.3    Meyers, B.C.4
  • 47
    • 84929330004 scopus 로고    scopus 로고
    • Comparative analysis of the Dicer-like gene family reveals loss of miR162 target site in SmDCL1 from Salvia miltiorrhiza
    • 47 Shao, F., Qiu, D., Lu, S., Comparative analysis of the Dicer-like gene family reveals loss of miR162 target site in SmDCL1 from Salvia miltiorrhiza. Sci Rep, 5, 2015, 9891.
    • (2015) Sci Rep , vol.5 , pp. 9891
    • Shao, F.1    Qiu, D.2    Lu, S.3
  • 48
    • 84881452587 scopus 로고    scopus 로고
    • Involvement of microRNA in copper deficiency-induced repression of chloroplastic CuZn-superoxide dismutase genes in the moss Physcomitrella patens
    • 48 Higashi, Y., Takechi, K., Takano, H., Takio, S., Involvement of microRNA in copper deficiency-induced repression of chloroplastic CuZn-superoxide dismutase genes in the moss Physcomitrella patens. Plant Cell Physiol 54 (2013), 1345–1355.
    • (2013) Plant Cell Physiol , vol.54 , pp. 1345-1355
    • Higashi, Y.1    Takechi, K.2    Takano, H.3    Takio, S.4
  • 49
    • 84961130680 scopus 로고    scopus 로고
    • MicroRNA from Moringa oleifera: identification by high throughput sequencing and their potential contribution to plant medicinal value
    • 49 Pirrò, S., Zanella, L., Kenzo, M., Montesano, C., Minutolo, A., Potestà, M., Sobze, M.S., Canini, A., Cirilli, M., Muleo, R., et al. MicroRNA from Moringa oleifera: identification by high throughput sequencing and their potential contribution to plant medicinal value. PLoS ONE, 11, 2016, e0149495.
    • (2016) PLoS ONE , vol.11 , pp. e0149495
    • Pirrò, S.1    Zanella, L.2    Kenzo, M.3    Montesano, C.4    Minutolo, A.5    Potestà, M.6    Sobze, M.S.7    Canini, A.8    Cirilli, M.9    Muleo, R.10


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.