메뉴 건너뛰기




Volumn 81, Issue 4, 2015, Pages 597-610

Rapid divergence and high diversity of miRNAs and miRNA targets in the Camelineae

Author keywords

Arabidopsis lyrata; Arabidopsis thaliana; Camelineae; Capsella rubella; divergence; miRNA; mutation

Indexed keywords

BIOLOGY; PLANTS (BOTANY);

EID: 84922624551     PISSN: 09607412     EISSN: 1365313X     Source Type: Journal    
DOI: 10.1111/tpj.12754     Document Type: Article
Times cited : (20)

References (64)
  • 1
    • 9644272448 scopus 로고    scopus 로고
    • Evolution of microRNA genes by inverted duplication of target gene sequences in Arabidopsis thaliana
    • Allen, E., Xie, Z., Gustafson, A.M., Sung, G.H., Spatafora, J.W., and, Carrington, J.C., (2004) Evolution of microRNA genes by inverted duplication of target gene sequences in Arabidopsis thaliana. Nat. Genet. 36, 1282-1290.
    • (2004) Nat. Genet. , vol.36 , pp. 1282-1290
    • Allen, E.1    Xie, Z.2    Gustafson, A.M.3    Sung, G.H.4    Spatafora, J.W.5    Carrington, J.C.6
  • 2
    • 17444430392 scopus 로고    scopus 로고
    • MicroRNA-directed phasing during trans-acting siRNA biogenesis in plants
    • Allen, E., Xie, Z., Gustafson, A.M., and, Carrington, J.C., (2005) microRNA-directed phasing during trans-acting siRNA biogenesis in plants. Cell, 121, 207-221.
    • (2005) Cell , vol.121 , pp. 207-221
    • Allen, E.1    Xie, Z.2    Gustafson, A.M.3    Carrington, J.C.4
  • 3
    • 79952334906 scopus 로고    scopus 로고
    • MicroR159 regulation of most conserved targets in Arabidopsis has negligible phenotypic effects
    • Allen, R.S., Li, J., Alonso-Peral, M.M., White, R.G., Gubler, F., and, Millar, A.A., (2010) MicroR159 regulation of most conserved targets in Arabidopsis has negligible phenotypic effects. Silence, 1 (1), 18.
    • (2010) Silence , vol.1 , Issue.1 , pp. 18
    • Allen, R.S.1    Li, J.2    Alonso-Peral, M.M.3    White, R.G.4    Gubler, F.5    Millar, A.A.6
  • 4
    • 0034649566 scopus 로고    scopus 로고
    • Analysis of the genome sequence of the flowering plant Arabidopsis thaliana
    • Arabidopsis Genome Initiative.
    • Arabidopsis Genome Initiative (2000) Analysis of the genome sequence of the flowering plant Arabidopsis thaliana. Nature, 408, 796-815.
    • (2000) Nature , vol.408 , pp. 796-815
  • 5
    • 22144457368 scopus 로고    scopus 로고
    • Antiquity of microRNAs and their targets in land plants
    • Axtell, M.J., and, Bartel, D.P., (2005) Antiquity of microRNAs and their targets in land plants. Plant Cell, 17, 1658-1673.
    • (2005) Plant Cell , vol.17 , pp. 1658-1673
    • Axtell, M.J.1    Bartel, D.P.2
  • 6
    • 34547668337 scopus 로고    scopus 로고
    • Common Functions for Diverse Small RNAs of Land Plants
    • Axtell, M.J., Snyder, J.A., and, Bartel, D.P., (2007) Common Functions for Diverse Small RNAs of Land Plants. Plant Cell, 19, 1750.
    • (2007) Plant Cell , vol.19 , pp. 1750
    • Axtell, M.J.1    Snyder, J.A.2    Bartel, D.P.3
  • 7
    • 80053384429 scopus 로고    scopus 로고
    • Whole-genome sequencing of multiple Arabidopsis thaliana populations
    • Cao, J., Schneeberger, K., Ossowski, S., et al. (2011) Whole-genome sequencing of multiple Arabidopsis thaliana populations. Nat. Genet. 43, 956-963.
    • (2011) Nat. Genet. , vol.43 , pp. 956-963
    • Cao, J.1    Schneeberger, K.2    Ossowski, S.3
  • 9
    • 33751520430 scopus 로고    scopus 로고
    • Natural selection on human microRNA binding sites inferred from SNP data
    • Chen, K., and, Rajewsky, N., (2006) Natural selection on human microRNA binding sites inferred from SNP data. Nat. Genet. 38, 1452-1456.
    • (2006) Nat. Genet. , vol.38 , pp. 1452-1456
    • Chen, K.1    Rajewsky, N.2
  • 10
    • 33846283385 scopus 로고    scopus 로고
    • The evolution of gene regulation by transcription factors and MicroRNAs
    • Chen, K., and, Rajewsky, N., (2007) The evolution of gene regulation by transcription factors and MicroRNAs. Nat. Rev. Genet. 8, 93-103.
    • (2007) Nat. Rev. Genet. , vol.8 , pp. 93-103
    • Chen, K.1    Rajewsky, N.2
  • 11
    • 79959967431 scopus 로고    scopus 로고
    • PsRNATarget: A plant small RNA target analysis server
    • Web Server issue
    • Dai, X., and, Zhao, P.X., (2011) psRNATarget: a plant small RNA target analysis server. Nucleic Acids Res. 39 (Web Server issue): W155-W159.
    • (2011) Nucleic Acids Res. , vol.39 , pp. W155-W159
    • Dai, X.1    Zhao, P.X.2
  • 12
    • 79961204641 scopus 로고    scopus 로고
    • Stars and symbiosis: MicroRNA- and microRNA∗-mediated transcript cleavage involved in Arbuscular Mycorrhizal symbiosis
    • Devers, E.A., Branscheid, A., May, P., and, Krajinski, F., (2011) Stars and symbiosis: microRNA- and microRNA∗-mediated transcript cleavage involved in Arbuscular Mycorrhizal symbiosis. Plant Physiol. 156 (4), 1990-2010.
    • (2011) Plant Physiol. , vol.156 , Issue.4 , pp. 1990-2010
    • Devers, E.A.1    Branscheid, A.2    May, P.3    Krajinski, F.4
  • 13
    • 3042666256 scopus 로고    scopus 로고
    • MUSCLE: Multiple sequence alignment with high accuracy and high throughput
    • Edgar, R.C., (2004) MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Res. 32 (5), 1792-1797.
    • (2004) Nucleic Acids Res. , vol.32 , Issue.5 , pp. 1792-1797
    • Edgar, R.C.1
  • 14
    • 48249142558 scopus 로고    scopus 로고
    • Sequence variation of MicroRNAs and their binding sites in Arabidopsis
    • Ehrenreich, I.M., and, Purugganan, M.D., (2008) Sequence variation of MicroRNAs and their binding sites in Arabidopsis. Plant Physiol. 146 (4), 1974-1982.
    • (2008) Plant Physiol. , vol.146 , Issue.4 , pp. 1974-1982
    • Ehrenreich, I.M.1    Purugganan, M.D.2
  • 16
    • 34547115664 scopus 로고    scopus 로고
    • High-throughput sequencing of Arabidopsis microRNAs: Evidence for frequent birth and death of MIRNA genes
    • Fahlgren, N., Howell, M.D., Kasschau, K.D., et al. (2007) High-throughput sequencing of Arabidopsis microRNAs: evidence for frequent birth and death of MIRNA genes. PLoS ONE, 2 (2), e219.
    • (2007) PLoS ONE , vol.2 , Issue.2 , pp. e219
    • Fahlgren, N.1    Howell, M.D.2    Kasschau, K.D.3
  • 17
    • 77953214518 scopus 로고    scopus 로고
    • MicroRNA gene evolution in Arabidopsis lyrata and Arabidopsis thaliana
    • Fahlgren, N., Jogdeo, S., Kasschau, K.D., et al. (2010) MicroRNA gene evolution in Arabidopsis lyrata and Arabidopsis thaliana. Plant Cell, 22 (4), 1074-1089.
    • (2010) Plant Cell , vol.22 , Issue.4 , pp. 1074-1089
    • Fahlgren, N.1    Jogdeo, S.2    Kasschau, K.D.3
  • 18
    • 84883166485 scopus 로고    scopus 로고
    • Phased, secondary, small interfering RNAs in posttranscriptional regulatory networks
    • Fei, Q., Xia, R., and, Meyers, B.C., (2013) Phased, secondary, small interfering RNAs in posttranscriptional regulatory networks. Plant Cell, 25 (7), 2400-2415.
    • (2013) Plant Cell , vol.25 , Issue.7 , pp. 2400-2415
    • Fei, Q.1    Xia, R.2    Meyers, B.C.3
  • 19
    • 57049169777 scopus 로고    scopus 로고
    • Evolution of Arabidopsis thaliana microRNAs from random sequences
    • Felippes, F.F., Schneeberger, K., Dezulian, T., Huson, D.H., and, Weigel, D., (2008) Evolution of Arabidopsis thaliana microRNAs from random sequences. RNA, 14 (12), 2455-2459.
    • (2008) RNA , vol.14 , Issue.12 , pp. 2455-2459
    • Felippes, F.F.1    Schneeberger, K.2    Dezulian, T.3    Huson, D.H.4    Weigel, D.5
  • 20
    • 1842484780 scopus 로고    scopus 로고
    • Gene regulation: Ancient microRNA target sequences in plants
    • Floyd, S.K., and, Bowman, J.L., (2004) Gene regulation: ancient microRNA target sequences in plants. Nature, 428 (6982), 485-486.
    • (2004) Nature , vol.428 , Issue.6982 , pp. 485-486
    • Floyd, S.K.1    Bowman, J.L.2
  • 21
    • 3242891068 scopus 로고    scopus 로고
    • VISTA: Computational tools for comparative genomics
    • Web Server issue
    • Frazer, K.A., Pachter, L., Poliakov, A., Rubin, E.M., and, Dubchak, I., (2004). VISTA: computational tools for comparative genomics. Nucleic Acids Res. 32 (Web Server issue): W273-W279.
    • (2004) Nucleic Acids Res. , vol.32 , pp. W273-W279
    • Frazer, K.A.1    Pachter, L.2    Poliakov, A.3    Rubin, E.M.4    Dubchak, I.5
  • 23
    • 0043123153 scopus 로고    scopus 로고
    • Vienna RNA secondary structure server
    • Hofacker, I.L., (2003) Vienna RNA secondary structure server. Nucleic Acids Res. 31 (13), 3429-3431.
    • (2003) Nucleic Acids Res. , vol.31 , Issue.13 , pp. 3429-3431
    • Hofacker, I.L.1
  • 24
    • 34250717043 scopus 로고    scopus 로고
    • Genome-wide analysis of the RNA-dependent RNA POLYMERASE6/DICER-LIKE4 pathway in Arabidopsis reveals dependency on miRNA- and tasiRNA-directed targeting
    • Howell, M.D., Fahlgren, N., Chapman, E.J., Cumbie, J.S., Sullivan, C.M., Givan, S.A., Kasschau, K.D., and, Carrington, J.C., (2007) Genome-wide analysis of the RNA-dependent RNA POLYMERASE6/DICER-LIKE4 pathway in Arabidopsis reveals dependency on miRNA- and tasiRNA-directed targeting. Plant Cell, 19 (3), 926-942.
    • (2007) Plant Cell , vol.19 , Issue.3 , pp. 926-942
    • Howell, M.D.1    Fahlgren, N.2    Chapman, E.J.3    Cumbie, J.S.4    Sullivan, C.M.5    Givan, S.A.6    Kasschau, K.D.7    Carrington, J.C.8
  • 25
    • 78651266827 scopus 로고    scopus 로고
    • MiRTarBase: A database curates experimentally validated microRNA-target interactions
    • Database issue
    • Hsu, S.D., Lin, F.M., Wu, W.Y., et al. 2011. miRTarBase: a database curates experimentally validated microRNA-target interactions. Nucleic Acids Res. 39 (Database issue): D163-169.
    • (2011) Nucleic Acids Res. , vol.39 , pp. D163-D169
    • Hsu, S.D.1    Lin, F.M.2    Wu, W.Y.3
  • 26
    • 79955468851 scopus 로고    scopus 로고
    • The Arabidopsis lyrata genome sequence and the basis of rapid genome size change
    • Hu, T.T., Pattyn, P., Bakker, E.G., et al. (2011) The Arabidopsis lyrata genome sequence and the basis of rapid genome size change. Nat. Genet. 43 (5), 476-481.
    • (2011) Nat. Genet. , vol.43 , Issue.5 , pp. 476-481
    • Hu, T.T.1    Pattyn, P.2    Bakker, E.G.3
  • 28
    • 84879704714 scopus 로고    scopus 로고
    • Comprehensive investigation of MicroRNAs enhanced by analysis of sequence variants, expression patterns, ARGONAUTE loading, and target cleavage
    • Jeong, D.H., Thatcher, S.R., Brown, R.S., Zhai, J., Park, S., Rymarquis, L.A., Meyers, B.C., and, Green, P.J., (2013) Comprehensive investigation of MicroRNAs enhanced by analysis of sequence variants, expression patterns, ARGONAUTE loading, and target cleavage. Plant Physiol. 162 (3), 1225-1245.
    • (2013) Plant Physiol. , vol.162 , Issue.3 , pp. 1225-1245
    • Jeong, D.H.1    Thatcher, S.R.2    Brown, R.S.3    Zhai, J.4    Park, S.5    Rymarquis, L.A.6    Meyers, B.C.7    Green, P.J.8
  • 29
    • 2942672580 scopus 로고    scopus 로고
    • Computational identification of plant microRNAs and their targets, including a stress-induced miRNA
    • Jones-Rhoades, M.W., and, Bartel, D.P., (2004) Computational identification of plant microRNAs and their targets, including a stress-induced miRNA. Mol. Cell, 14 (6), 787-799.
    • (2004) Mol. Cell , vol.14 , Issue.6 , pp. 787-799
    • Jones-Rhoades, M.W.1    Bartel, D.P.2
  • 30
    • 0142165224 scopus 로고    scopus 로고
    • Functional siRNAs and miRNAs exhibit strand bias
    • Khvorova, A., Reynolds, A., and, Jayasena, S.D., (2003) Functional siRNAs and miRNAs exhibit strand bias. Cell, 115 (2), 209-216.
    • (2003) Cell , vol.115 , Issue.2 , pp. 209-216
    • Khvorova, A.1    Reynolds, A.2    Jayasena, S.D.3
  • 31
    • 78651293534 scopus 로고    scopus 로고
    • MiRBase: Integrating microRNA annotation and deep-sequencing data
    • Database issue
    • Kozomara, A., and, Griffiths-Jones, S., (2011). miRBase: integrating microRNA annotation and deep-sequencing data. Nucleic Acids Res. 39 (Database issue): D152-157.
    • (2011) Nucleic Acids Res. , vol.39 , pp. D152-D157
    • Kozomara, A.1    Griffiths-Jones, S.2
  • 33
    • 84897089685 scopus 로고    scopus 로고
    • Analysis of complementarity requirements for plant microRNA targeting using a nicotiana benthamiana quantitative transient assay
    • Liu, Q., Wang, F., and, Axtell, M.J., (2014) Analysis of complementarity requirements for plant microRNA targeting using a nicotiana benthamiana quantitative transient assay. Plant Cell, 26 (2), 741-753.
    • (2014) Plant Cell , vol.26 , Issue.2 , pp. 741-753
    • Liu, Q.1    Wang, F.2    Axtell, M.J.3
  • 34
    • 77953217767 scopus 로고    scopus 로고
    • Arabidopsis lyrata small RNAs: Transient MIRNA and small interfering RNA loci within the Arabidopsis genus
    • Ma, Z., Coruh, C., and, Axtell, M.J., (2010) Arabidopsis lyrata small RNAs: transient MIRNA and small interfering RNA loci within the Arabidopsis genus. Plant Cell, 22 (4), 1090-1103.
    • (2010) Plant Cell , vol.22 , Issue.4 , pp. 1090-1103
    • Ma, Z.1    Coruh, C.2    Axtell, M.J.3
  • 35
    • 4444363152 scopus 로고    scopus 로고
    • MicroRNA control of PHABULOSA in leaf development: Importance of pairing to the microRNA 5' region
    • Mallory, A.C., Reinhart, B.J., Jones-Rhoades, M.W., Tang, G., Zamore, P.D., Barton, M.K., and, Bartel, D.P., (2004) MicroRNA control of PHABULOSA in leaf development: importance of pairing to the microRNA 5' region. EMBO J. 23 (16), 3356-3364.
    • (2004) EMBO J. , vol.23 , Issue.16 , pp. 3356-3364
    • Mallory, A.C.1    Reinhart, B.J.2    Jones-Rhoades, M.W.3    Tang, G.4    Zamore, P.D.5    Barton, M.K.6    Bartel, D.P.7
  • 37
    • 48249109932 scopus 로고    scopus 로고
    • Structurally different alleles of the ath-MIR824 microRNA precursor are maintained at high frequency in Arabidopsis thaliana
    • de Meaux, J., Hu, J.Y., Tartler, U., and, Goebel, U., (2008) Structurally different alleles of the ath-MIR824 microRNA precursor are maintained at high frequency in Arabidopsis thaliana. Proc. Natl. Acad. Sci. USA, 105 (26), 8994-8999.
    • (2008) Proc. Natl. Acad. Sci. USA , vol.105 , Issue.26 , pp. 8994-8999
    • De Meaux, J.1    Hu, J.Y.2    Tartler, U.3    Goebel, U.4
  • 38
    • 77952403409 scopus 로고    scopus 로고
    • Small silencing RNAs in plants are mobile and direct epigenetic modification in recipient cells
    • Molnar, A., Melnyk, C.W., Bassett, A., Hardcastle, T.J., Dunn, R., and, Baulcombe, D.C., (2010) Small silencing RNAs in plants are mobile and direct epigenetic modification in recipient cells. Science, 328 (5980), 872-875.
    • (2010) Science , vol.328 , Issue.5980 , pp. 872-875
    • Molnar, A.1    Melnyk, C.W.2    Bassett, A.3    Hardcastle, T.J.4    Dunn, R.5    Baulcombe, D.C.6
  • 39
    • 58149484856 scopus 로고    scopus 로고
    • AGO1-miR173 complex initiates phased siRNA formation in plants
    • Montgomery, T.A., Yoo, S.J., Fahlgren, N., et al. (2008) AGO1-miR173 complex initiates phased siRNA formation in plants. Proc. Natl. Acad. Sci. USA, 105 (51), 20055-20062.
    • (2008) Proc. Natl. Acad. Sci. USA , vol.105 , Issue.51 , pp. 20055-20062
    • Montgomery, T.A.1    Yoo, S.J.2    Fahlgren, N.3
  • 41
    • 77950822671 scopus 로고    scopus 로고
    • Single-nucleotide polymorphisms inside microRNA target sites influence tumor susceptibility
    • Nicoloso, M.S., Sun, H., Spizzo, R., et al. (2010) Single-nucleotide polymorphisms inside microRNA target sites influence tumor susceptibility. Cancer Res. 70 (7), 2789-2798.
    • (2010) Cancer Res. , vol.70 , Issue.7 , pp. 2789-2798
    • Nicoloso, M.S.1    Sun, H.2    Spizzo, R.3
  • 42
    • 38949151063 scopus 로고    scopus 로고
    • Gene silencing in plants using artificial microRNAs and other small RNAs
    • Ossowski, S., Schwab, R., and, Weigel, D., (2008) Gene silencing in plants using artificial microRNAs and other small RNAs. Plant J. 53 (4), 674-690.
    • (2008) Plant J. , vol.53 , Issue.4 , pp. 674-690
    • Ossowski, S.1    Schwab, R.2    Weigel, D.3
  • 44
    • 34250832061 scopus 로고    scopus 로고
    • Sequence and expression differences underlie functional specialization of Arabidopsis microRNAs miR159 and miR319
    • Palatnik, J.F., Wollmann, H., Schommer, C., et al. (2007) Sequence and expression differences underlie functional specialization of Arabidopsis microRNAs miR159 and miR319. Dev. Cell, 13 (1), 115-125.
    • (2007) Dev. Cell , vol.13 , Issue.1 , pp. 115-125
    • Palatnik, J.F.1    Wollmann, H.2    Schommer, C.3
  • 45
    • 67650156804 scopus 로고    scopus 로고
    • Identification of nutrient-responsive Arabidopsis and rapeseed microRNAs by comprehensive real-time polymerase chain reaction profiling and small RNA sequencing
    • Pant, B.D., Musialak-Lange, M., Nuc, P., May, P., Buhtz, A., Kehr, J., Walther, D., and, Scheible, W.R., (2009) Identification of nutrient-responsive Arabidopsis and rapeseed microRNAs by comprehensive real-time polymerase chain reaction profiling and small RNA sequencing. Plant Physiol. 150 (3), 1541-1555.
    • (2009) Plant Physiol. , vol.150 , Issue.3 , pp. 1541-1555
    • Pant, B.D.1    Musialak-Lange, M.2    Nuc, P.3    May, P.4    Buhtz, A.5    Kehr, J.6    Walther, D.7    Scheible, W.R.8
  • 46
    • 33845688601 scopus 로고    scopus 로고
    • A diverse and evolutionarily fluid set of microRNAs in Arabidopsis thaliana
    • Rajagopalan, R., Vaucheret, H., Trejo, J., and, Bartel, D.P., (2006) A diverse and evolutionarily fluid set of microRNAs in Arabidopsis thaliana. Genes Dev. 20 (24), 3407-3425.
    • (2006) Genes Dev. , vol.20 , Issue.24 , pp. 3407-3425
    • Rajagopalan, R.1    Vaucheret, H.2    Trejo, J.3    Bartel, D.P.4
  • 48
    • 33847665108 scopus 로고    scopus 로고
    • Human polymorphism at microRNAs and microRNA target sites
    • Saunders, M.A., Liang, H., and, Li, W.H., (2007) Human polymorphism at microRNAs and microRNA target sites. Proc. Natl. Acad. Sci. USA, 104 (9), 3300-3305.
    • (2007) Proc. Natl. Acad. Sci. USA , vol.104 , Issue.9 , pp. 3300-3305
    • Saunders, M.A.1    Liang, H.2    Li, W.H.3
  • 50
    • 33745393624 scopus 로고    scopus 로고
    • Highly specific gene silencing by artificial microRNAs in arabidopsis
    • Schwab, R., Ossowski, S., Riester, M., Warthmann, N., and, Weigel, D., (2006) Highly specific gene silencing by artificial microRNAs in arabidopsis. Plant Cell, 18 (5), 1121-1133.
    • (2006) Plant Cell , vol.18 , Issue.5 , pp. 1121-1133
    • Schwab, R.1    Ossowski, S.2    Riester, M.3    Warthmann, N.4    Weigel, D.5
  • 51
    • 10744225153 scopus 로고    scopus 로고
    • Asymmetry in the assembly of the RNAi enzyme complex
    • Schwarz, D.S., Hutvagner, G., Du, T., Xu, Z., Aronin, N., and, Zamore, P.D., (2003) Asymmetry in the assembly of the RNAi enzyme complex. Cell, 115 (2), 199-208.
    • (2003) Cell , vol.115 , Issue.2 , pp. 199-208
    • Schwarz, D.S.1    Hutvagner, G.2    Du, T.3    Xu, Z.4    Aronin, N.5    Zamore, P.D.6
  • 52
    • 84860126087 scopus 로고    scopus 로고
    • A microRNA superfamily regulates nucleotide binding site-leucine-rich repeats and other mRNAs
    • Shivaprasad, P.V., Chen, H.M., Patel, K., Bond, D.M., Santos, B.A.C.M., and, Baulcombe, D.C., (2012) A microRNA superfamily regulates nucleotide binding site-leucine-rich repeats and other mRNAs. Plant Cell, 24 (3), 859-874.
    • (2012) Plant Cell , vol.24 , Issue.3 , pp. 859-874
    • Shivaprasad, P.V.1    Chen, H.M.2    Patel, K.3    Bond, D.M.4    Santos, B.A.C.M.5    Baulcombe, D.C.6
  • 53
    • 84879686532 scopus 로고    scopus 로고
    • The Capsella rubella genome and the genomic consequences of rapid mating system evolution
    • Slotte, T., Hazzouri, K.M., Agren, J.A., et al. (2013) The Capsella rubella genome and the genomic consequences of rapid mating system evolution. Nat. Genet. 45 (7), 831-835.
    • (2013) Nat. Genet. , vol.45 , Issue.7 , pp. 831-835
    • Slotte, T.1    Hazzouri, K.M.2    Agren, J.A.3
  • 54
    • 80052161889 scopus 로고    scopus 로고
    • Selection fine-tunes the expression of microRNA target genes in Arabidopsis thaliana
    • Takuno, S., and, Innan, H., (2011) Selection fine-tunes the expression of microRNA target genes in Arabidopsis thaliana. Mol. Biol. Evol. 28 (9), 2429-2434.
    • (2011) Mol. Biol. Evol. , vol.28 , Issue.9 , pp. 2429-2434
    • Takuno, S.1    Innan, H.2
  • 57
    • 60149086351 scopus 로고    scopus 로고
    • Origin, biogenesis, and activity of plant microRNAs
    • Voinnet, O., (2009) Origin, biogenesis, and activity of plant microRNAs. Cell, 136 (4), 669-687.
    • (2009) Cell , vol.136 , Issue.4 , pp. 669-687
    • Voinnet, O.1
  • 58
    • 47249141071 scopus 로고    scopus 로고
    • Comparative analysis of the MIR319a microRNA locus in Arabidopsis and related Brassicaceae
    • Warthmann, N., Das, S., Lanz, C., and, Weigel, D., (2008) Comparative analysis of the MIR319a microRNA locus in Arabidopsis and related Brassicaceae. Mol. Biol. Evol. 25 (5), 892-902.
    • (2008) Mol. Biol. Evol. , vol.25 , Issue.5 , pp. 892-902
    • Warthmann, N.1    Das, S.2    Lanz, C.3    Weigel, D.4
  • 59
    • 84879466274 scopus 로고    scopus 로고
    • MicroRNA superfamilies descended from miR390 and their roles in secondary small interfering RNA biogenesis in Eudicots
    • Xia, R., Meyers, B.C., Liu, Z., Beers, E.P., and, Ye, S., (2013) MicroRNA superfamilies descended from miR390 and their roles in secondary small interfering RNA biogenesis in Eudicots. Plant Cell, 25 (5), 1555-1572.
    • (2013) Plant Cell , vol.25 , Issue.5 , pp. 1555-1572
    • Xia, R.1    Meyers, B.C.2    Liu, Z.3    Beers, E.P.4    Ye, S.5
  • 60
    • 79959694145 scopus 로고    scopus 로고
    • Global analysis of gene-level microRNA expression in Arabidopsis using deep sequencing data
    • Yang, X., Zhang, H., and, Li, L., (2011) Global analysis of gene-level microRNA expression in Arabidopsis using deep sequencing data. Genomics, 98 (1), 40-46.
    • (2011) Genomics , vol.98 , Issue.1 , pp. 40-46
    • Yang, X.1    Zhang, H.2    Li, L.3
  • 61
    • 24944491201 scopus 로고    scopus 로고
    • A pathway for the biogenesis of trans-acting siRNAs in Arabidopsis
    • Yoshikawa, M., Peragine, A., Park, M.Y., and, Poethig, R.S., (2005) A pathway for the biogenesis of trans-acting siRNAs in Arabidopsis. Genes Dev. 19 (18), 2164-2175.
    • (2005) Genes Dev. , vol.19 , Issue.18 , pp. 2164-2175
    • Yoshikawa, M.1    Peragine, A.2    Park, M.Y.3    Poethig, R.S.4
  • 62
    • 82955207556 scopus 로고    scopus 로고
    • MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs
    • Zhai, J.X., Jeong, D.H., De Paoli, E., et al. (2011) MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs. Genes Dev. 25 (23), 2540-2553.
    • (2011) Genes Dev. , vol.25 , Issue.23 , pp. 2540-2553
    • Zhai, J.X.1    Jeong, D.H.2    De Paoli, E.3
  • 63
    • 33646830110 scopus 로고    scopus 로고
    • Conservation and divergence of plant microRNA genes
    • Zhang, B., Pan, X., Cannon, C.H., Cobb, G.P., and, Anderson, T.A., (2006) Conservation and divergence of plant microRNA genes. Plant J. 46 (2), 243-259.
    • (2006) Plant J. , vol.46 , Issue.2 , pp. 243-259
    • Zhang, B.1    Pan, X.2    Cannon, C.H.3    Cobb, G.P.4    Anderson, T.A.5
  • 64
    • 79955499404 scopus 로고    scopus 로고
    • Arabidopsis argonaute 2 regulates innate immunity via miRNA393∗-mediated silencing of a golgi-localized SNARE Gene, MEMB12
    • Zhang, X.M., Zhao, H.W., Gao, S., Wang, W.C., Katiyar-Agarwal, S., Huang, H.D., Raikhel, N., and, Jin, H.L., (2011) Arabidopsis argonaute 2 regulates innate immunity via miRNA393∗-mediated silencing of a golgi-localized SNARE Gene, MEMB12. Mol. Cell, 42 (3), 356-366.
    • (2011) Mol. Cell , vol.42 , Issue.3 , pp. 356-366
    • Zhang, X.M.1    Zhao, H.W.2    Gao, S.3    Wang, W.C.4    Katiyar-Agarwal, S.5    Huang, H.D.6    Raikhel, N.7    Jin, H.L.8


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.