Adjusting microbiome profiles for differences in microbial load by spike-in bacteria

Microbiome

Volumn 4, Issue , 2016, Pages

  Stämmler, Frank ^a,b   Gläsner, Joachim ^b   Hiergeist, Andreas ^b   Holler, Ernst ^b   Weber, Daniela ^b   Oefner, Peter J ^a   Gessner, André ^b   Spang, Rainer ^a  

^a UNIVERSITY OF REGENSBURG   (Germany)

^b UNIVERSITY HOSPITAL REGENSBURG   (Germany)

Author keywords

16S rRNA gene sequencing; Bacterial communities; Community analysis; Microbial load; Microbiome profiling; Spike in bacteria; Standardization

Indexed keywords

DNA 16S; RNA 16S; RIBOSOME DNA;

AGROBACTERIUM TUMEFACIENS; ALICYCLOBACILLUS; ALLOGENEIC STEM CELL TRANSPLANTATION; ANTIBIOTIC THERAPY; ARTICLE; BACTERIUM; CELL COUNTING; CONTROLLED STUDY; DNA EXTRACTION; ENTEROCOCCUS; FECES ANALYSIS; GENE AMPLIFICATION; GENE DOSAGE; GENE SEQUENCE; HALOPHILIC BACTERIUM; HUMAN; MALE; MICROBIOME; MOUSE; NEXT GENERATION SEQUENCING; NONHUMAN; PATHOGEN LOAD; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; PYROSEQUENCING; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; RNA GENE; SALINIBACTER RUBER; SPIKE IN BACTERIA; ANIMAL; CLASSIFICATION; DNA SEQUENCE; FECES; GENETICS; HIGH THROUGHPUT SEQUENCING; MICROBIOLOGICAL EXAMINATION; MICROBIOLOGY; MICROFLORA; PROCEDURES;

ANIMALS; BACTERIA; BACTERIOLOGICAL TECHNIQUES; DNA, RIBOSOMAL; FECES; HIGH-THROUGHPUT NUCLEOTIDE SEQUENCING; HUMANS; MICE; MICROBIOTA; RNA, RIBOSOMAL, 16S; SEQUENCE ANALYSIS, DNA;

EID: 84996526198     PISSN: None     EISSN: 20492618     Source Type: Journal    
DOI: 10.1186/s40168-016-0175-0     Document Type: Article

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